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Lsi01G010950 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G010950
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr01:9006146..9007224
RNA-Seq ExpressionLsi01G010950
SyntenyLsi01G010950
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AVP27574.1 hypothetical protein [Helianthus annuus]2.5e-1868.13Show/hide
Query:  MVWALIHVVRPGDSITLLTLLASRRQPWKFINFSLSRVLYCTAKLANNIYMFFLRNQTYMHEEEYISLVIFLCNFCRPVHCGSSALLAICL
        MVWAL HVVRPGDSITLL LLA       FI  S S  LY   +  + I + FLRNQT MHEEE+ISLVIFL NFCRPVHCGSSALLAI L
Subjt:  MVWALIHVVRPGDSITLLTLLASRRQPWKFINFSLSRVLYCTAKLANNIYMFFLRNQTYMHEEEYISLVIFLCNFCRPVHCGSSALLAICL
GFB43083.1 hypothetical protein [Tanacetum cinerariifolium]4.6e-0475.68Show/hide
Query:  EGSVPPLDISSPRAPNVELERQLPWNLRSHMSTSPSK
        EGSVPPLD  +P APNVELE  LPWN RSH+S SPSK
Subjt:  EGSVPPLDISSPRAPNVELERQLPWNLRSHMSTSPSK
GFQ06188.1 ATP synthase epsilon chain chloroplastic [Phtheirospermum japonicum]4.6e-0483.87Show/hide
Query:  SPRAPNVELERQLPWNLRSHMSTSPSKKSGC
        S RAPN ELE  LPWN RSHMSTSPSKKSGC
Subjt:  SPRAPNVELERQLPWNLRSHMSTSPSKKSGC
TrEMBL top hitse value%identityAlignment
A0A2P1MA82 Uncharacterized protein1.2e-1868.13Show/hide
Query:  MVWALIHVVRPGDSITLLTLLASRRQPWKFINFSLSRVLYCTAKLANNIYMFFLRNQTYMHEEEYISLVIFLCNFCRPVHCGSSALLAICL
        MVWAL HVVRPGDSITLL LLA       FI  S S  LY   +  + I + FLRNQT MHEEE+ISLVIFL NFCRPVHCGSSALLAI L
Subjt:  MVWALIHVVRPGDSITLLTLLASRRQPWKFINFSLSRVLYCTAKLANNIYMFFLRNQTYMHEEEYISLVIFLCNFCRPVHCGSSALLAICL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCTGGGCTCTCATTCACGTCGTCCGTCCTGGGGACTCTATTACGTTGCTCACCCTATTAGCTAGCCGGCGGCAACCGTGGAAATTCATTAATTTCAGCCTGTCTCG
GGTTCTCTATTGTACGGCAAAACTCGCTAATAATATATATATGTTTTTTCTCAGGAACCAGACCTACATGCACGAAGAAGAATATATATCTCTGGTCATATTCTTGTGTA
ACTTCTGTCGTCCCGTTCATTGTGGTTCCTCGGCCCTGCTAGCCATTTGCTTGCTCGAACTCACACTTCTGGTGGTAGCCATTGGGCTAAGTCTCCAAAAAGAGCCACTC
ACATATATAGATAGGCATTACAGAGGAGCTTCGCTTTCTGCTTCGGTTGGCGCGTTGCACGGTGAGCTTGGTAGTAGCATAGGCTGGGCTTACGTTTTTCAATTGCATCG
TACCGTACGATGGGAGGGGTCCGTACCTCCTTTAGATATCTCGAGCCCCCGTGCTCCTAATGTCGAGCTAGAACGACAGCTACCGTGGAATCTGCGATCACACATGAGTA
CCTCGCCTTCCAAAAAAAGCGGCTGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTCTGGGCTCTCATTCACGTCGTCCGTCCTGGGGACTCTATTACGTTGCTCACCCTATTAGCTAGCCGGCGGCAACCGTGGAAATTCATTAATTTCAGCCTGTCTCG
GGTTCTCTATTGTACGGCAAAACTCGCTAATAATATATATATGTTTTTTCTCAGGAACCAGACCTACATGCACGAAGAAGAATATATATCTCTGGTCATATTCTTGTGTA
ACTTCTGTCGTCCCGTTCATTGTGGTTCCTCGGCCCTGCTAGCCATTTGCTTGCTCGAACTCACACTTCTGGTGGTAGCCATTGGGCTAAGTCTCCAAAAAGAGCCACTC
ACATATATAGATAGGCATTACAGAGGAGCTTCGCTTTCTGCTTCGGTTGGCGCGTTGCACGGTGAGCTTGGTAGTAGCATAGGCTGGGCTTACGTTTTTCAATTGCATCG
TACCGTACGATGGGAGGGGTCCGTACCTCCTTTAGATATCTCGAGCCCCCGTGCTCCTAATGTCGAGCTAGAACGACAGCTACCGTGGAATCTGCGATCACACATGAGTA
CCTCGCCTTCCAAAAAAAGCGGCTGCTAA
Protein sequenceShow/hide protein sequence
MVWALIHVVRPGDSITLLTLLASRRQPWKFINFSLSRVLYCTAKLANNIYMFFLRNQTYMHEEEYISLVIFLCNFCRPVHCGSSALLAICLLELTLLVVAIGLSLQKEPL
TYIDRHYRGASLSASVGALHGELGSSIGWAYVFQLHRTVRWEGSVPPLDISSPRAPNVELERQLPWNLRSHMSTSPSKKSGC