; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi01G011030 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G011030
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionWRKY domain-containing protein
Genome locationchr01:9097575..9098819
RNA-Seq ExpressionLsi01G011030
SyntenyLsi01G011030
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domainsIPR003657 - WRKY domain
IPR036576 - WRKY domain superfamily
IPR044810 - WRKY transcription factor, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
NP_001362711.1 probable WRKY transcription factor 13-like [Cucumis sativus]3.1e-6176.6Show/hide
Query:  MGSSASEEAIMVSLFQ-ADQEAAAVNTAAITTNFISFPENNNNNN-INVVEQSLKPFLFTTQQYFSHQ--QQSLFPFWFPASTTTPSHLLSSLNTPSPSS
        MGSSASEE +MV L +  DQ AAAVN AAITTN I  PENNN NN I+VV+QSLKP  FTT  +   Q  QQSLFPF FP STTT SHLL S    SPSS
Subjt:  MGSSASEEAIMVSLFQ-ADQEAAAVNTAAITTNFISFPENNNNNN-INVVEQSLKPFLFTTQQYFSHQ--QQSLFPFWFPASTTTPSHLLSSLNTPSPSS

Query:  LWDER-ESFVRGRNGIGNYGGDDD--NDEDRKPRLRVSTMKMKRIKGRKKVREPRFSFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPR
        LWDER  SF+RGRN IGNYGG+DD  N+ D KPRLRVSTMKMKRIKGRKKVREPRFSFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPR
Subjt:  LWDER-ESFVRGRNGIGNYGGDDD--NDEDRKPRLRVSTMKMKRIKGRKKVREPRFSFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPR

TYK12978.1 putative WRKY transcription factor 12 isoform X2 [Cucumis melo var. makuwa]2.5e-6376.63Show/hide
Query:  MGSSASEEAIMVSLFQADQEAAAVNTAAITTNFISFPENNNNNN--INVVEQSLKPFLFTTQQYFSHQQQSLFPFWFPASTTTPSHLLSSLNTPSPSSLW
        MGSSASEE ++VSL Q   + AA   AA+TTN I  PENNNNNN  INVV+QSLKP  FTT  +   QQQSLFPF FP STTT SHLL+S    SPSSLW
Subjt:  MGSSASEEAIMVSLFQADQEAAAVNTAAITTNFISFPENNNNNN--INVVEQSLKPFLFTTQQYFSHQQQSLFPFWFPASTTTPSHLLSSLNTPSPSSLW

Query:  DERE-SFVRGRNGIGNYGGDDDNDEDRKPRLRVSTMKMKRIKGRKKVREPRFSFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPR
        DER  SF+RGRN IGNYGGDDD + D KPRLRVSTMKMKRIKGRKKVREPRFSFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPR
Subjt:  DERE-SFVRGRNGIGNYGGDDDNDEDRKPRLRVSTMKMKRIKGRKKVREPRFSFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPR

XP_008440122.1 PREDICTED: probable WRKY transcription factor 12 isoform X2 [Cucumis melo]2.5e-6376.63Show/hide
Query:  MGSSASEEAIMVSLFQADQEAAAVNTAAITTNFISFPENNNNNN--INVVEQSLKPFLFTTQQYFSHQQQSLFPFWFPASTTTPSHLLSSLNTPSPSSLW
        MGSSASEE ++VSL Q   + AA   AA+TTN I  PENNNNNN  INVV+QSLKP  FTT  +   QQQSLFPF FP STTT SHLL+S    SPSSLW
Subjt:  MGSSASEEAIMVSLFQADQEAAAVNTAAITTNFISFPENNNNNN--INVVEQSLKPFLFTTQQYFSHQQQSLFPFWFPASTTTPSHLLSSLNTPSPSSLW

Query:  DERE-SFVRGRNGIGNYGGDDDNDEDRKPRLRVSTMKMKRIKGRKKVREPRFSFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPR
        DER  SF+RGRN IGNYGGDDD + D KPRLRVSTMKMKRIKGRKKVREPRFSFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPR
Subjt:  DERE-SFVRGRNGIGNYGGDDDNDEDRKPRLRVSTMKMKRIKGRKKVREPRFSFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPR

XP_016899208.1 PREDICTED: probable WRKY transcription factor 12 isoform X1 [Cucumis melo]6.8e-6172.68Show/hide
Query:  MGSSASEEAIMVSLFQADQEAAAVNTAAITTNFISFPENNNNNN--INVVEQSLKPFLFTTQQYFSHQQQSLFPFWFPASTTTPSHLLSSLNTPSPSSLW
        MGSSASEE ++VSL Q   + AA   AA+TTN I  PENNNNNN  INVV+QSLKP  FTT  +   QQQSLFPF FP STTT SHLL+S    SPSSLW
Subjt:  MGSSASEEAIMVSLFQADQEAAAVNTAAITTNFISFPENNNNNN--INVVEQSLKPFLFTTQQYFSHQQQSLFPFWFPASTTTPSHLLSSLNTPSPSSLW

Query:  ----------DERE-SFVRGRNGIGNYGGDDDNDEDRKPRLRVSTMKMKRIKGRKKVREPRFSFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPR
                  DER  SF+RGRN IGNYGGDDD + D KPRLRVSTMKMKRIKGRKKVREPRFSFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPR
Subjt:  ----------DERE-SFVRGRNGIGNYGGDDDNDEDRKPRLRVSTMKMKRIKGRKKVREPRFSFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPR

XP_038883389.1 probable WRKY transcription factor 13 [Benincasa hispida]1.3e-7281.52Show/hide
Query:  MGSSASE-EAIMVSLFQADQEAAAVNTAAITTNFISFPENNNNNNINVVEQSLKPFLFTTQQYFS--HQQQSLFPFWFPASTTTPSHLLSSLNTPSPSSL
        MGSSASE + IMVSL QADQ AAA N AAI+TNFIS+PENNN NNIN V+QSLKPF F+T QY S  HQQQSLFPF    STTTPS+LLSS NTPSPSSL
Subjt:  MGSSASE-EAIMVSLFQADQEAAAVNTAAITTNFISFPENNNNNNINVVEQSLKPFLFTTQQYFS--HQQQSLFPFWFPASTTTPSHLLSSLNTPSPSSL

Query:  WDERESFVRGRNGIGNYGGDDDNDEDRKPRLRVSTMKMKRIKGRKKVREPRFSFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPR
        WDE ESF+RGRNGIGNYGGD D+++DRKP+LR+ST+KMKRIKGRKKVREPRFSFKTMTDVDVLDDGYKWRKYGQK+VKNTLHPR
Subjt:  WDERESFVRGRNGIGNYGGDDDNDEDRKPRLRVSTMKMKRIKGRKKVREPRFSFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPR

TrEMBL top hitse value%identityAlignment
A0A0A0KFC7 WRKY domain-containing protein1.5e-6176.6Show/hide
Query:  MGSSASEEAIMVSLFQ-ADQEAAAVNTAAITTNFISFPENNNNNN-INVVEQSLKPFLFTTQQYFSHQ--QQSLFPFWFPASTTTPSHLLSSLNTPSPSS
        MGSSASEE +MV L +  DQ AAAVN AAITTN I  PENNN NN I+VV+QSLKP  FTT  +   Q  QQSLFPF FP STTT SHLL S    SPSS
Subjt:  MGSSASEEAIMVSLFQ-ADQEAAAVNTAAITTNFISFPENNNNNN-INVVEQSLKPFLFTTQQYFSHQ--QQSLFPFWFPASTTTPSHLLSSLNTPSPSS

Query:  LWDER-ESFVRGRNGIGNYGGDDD--NDEDRKPRLRVSTMKMKRIKGRKKVREPRFSFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPR
        LWDER  SF+RGRN IGNYGG+DD  N+ D KPRLRVSTMKMKRIKGRKKVREPRFSFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPR
Subjt:  LWDER-ESFVRGRNGIGNYGGDDD--NDEDRKPRLRVSTMKMKRIKGRKKVREPRFSFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPR

A0A1S3B0E1 probable WRKY transcription factor 12 isoform X21.2e-6376.63Show/hide
Query:  MGSSASEEAIMVSLFQADQEAAAVNTAAITTNFISFPENNNNNN--INVVEQSLKPFLFTTQQYFSHQQQSLFPFWFPASTTTPSHLLSSLNTPSPSSLW
        MGSSASEE ++VSL Q   + AA   AA+TTN I  PENNNNNN  INVV+QSLKP  FTT  +   QQQSLFPF FP STTT SHLL+S    SPSSLW
Subjt:  MGSSASEEAIMVSLFQADQEAAAVNTAAITTNFISFPENNNNNN--INVVEQSLKPFLFTTQQYFSHQQQSLFPFWFPASTTTPSHLLSSLNTPSPSSLW

Query:  DERE-SFVRGRNGIGNYGGDDDNDEDRKPRLRVSTMKMKRIKGRKKVREPRFSFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPR
        DER  SF+RGRN IGNYGGDDD + D KPRLRVSTMKMKRIKGRKKVREPRFSFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPR
Subjt:  DERE-SFVRGRNGIGNYGGDDDNDEDRKPRLRVSTMKMKRIKGRKKVREPRFSFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPR

A0A1S4DTC3 probable WRKY transcription factor 12 isoform X13.3e-6172.68Show/hide
Query:  MGSSASEEAIMVSLFQADQEAAAVNTAAITTNFISFPENNNNNN--INVVEQSLKPFLFTTQQYFSHQQQSLFPFWFPASTTTPSHLLSSLNTPSPSSLW
        MGSSASEE ++VSL Q   + AA   AA+TTN I  PENNNNNN  INVV+QSLKP  FTT  +   QQQSLFPF FP STTT SHLL+S    SPSSLW
Subjt:  MGSSASEEAIMVSLFQADQEAAAVNTAAITTNFISFPENNNNNN--INVVEQSLKPFLFTTQQYFSHQQQSLFPFWFPASTTTPSHLLSSLNTPSPSSLW

Query:  ----------DERE-SFVRGRNGIGNYGGDDDNDEDRKPRLRVSTMKMKRIKGRKKVREPRFSFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPR
                  DER  SF+RGRN IGNYGGDDD + D KPRLRVSTMKMKRIKGRKKVREPRFSFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPR
Subjt:  ----------DERE-SFVRGRNGIGNYGGDDDNDEDRKPRLRVSTMKMKRIKGRKKVREPRFSFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPR

A0A5D3CP86 Putative WRKY transcription factor 12 isoform X21.2e-6376.63Show/hide
Query:  MGSSASEEAIMVSLFQADQEAAAVNTAAITTNFISFPENNNNNN--INVVEQSLKPFLFTTQQYFSHQQQSLFPFWFPASTTTPSHLLSSLNTPSPSSLW
        MGSSASEE ++VSL Q   + AA   AA+TTN I  PENNNNNN  INVV+QSLKP  FTT  +   QQQSLFPF FP STTT SHLL+S    SPSSLW
Subjt:  MGSSASEEAIMVSLFQADQEAAAVNTAAITTNFISFPENNNNNN--INVVEQSLKPFLFTTQQYFSHQQQSLFPFWFPASTTTPSHLLSSLNTPSPSSLW

Query:  DERE-SFVRGRNGIGNYGGDDDNDEDRKPRLRVSTMKMKRIKGRKKVREPRFSFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPR
        DER  SF+RGRN IGNYGGDDD + D KPRLRVSTMKMKRIKGRKKVREPRFSFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPR
Subjt:  DERE-SFVRGRNGIGNYGGDDDNDEDRKPRLRVSTMKMKRIKGRKKVREPRFSFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPR

A0A6J1IL81 probable WRKY transcription factor 121.8e-4362.63Show/hide
Query:  MGSSASEE-AIMVSLFQADQEAAAVNTAAITTNFISFPENNNNNNINVVEQSLKPFLF--TTQQYF---SHQQQSLFPFWFPASTTT---PSHLLSSLNT
        MGSSASEE  IM +L QA+Q       AAITTNF SFPEN N    N+V+Q+LKPFLF     QY      QQQS+FPF FP  +TT    SHLLSSL  
Subjt:  MGSSASEE-AIMVSLFQADQEAAAVNTAAITTNFISFPENNNNNNINVVEQSLKPFLF--TTQQYF---SHQQQSLFPFWFPASTTT---PSHLLSSLNT

Query:  PSPSSLWDERESFVRGRNGIGNYGGDDDNDEDRKPRLRVSTMKMKRIKGRKKVREPRFSFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPR
         SPSSL D  ES        GN+G  D + ++RK  LRV T+KMKR+KGR+KVREPRF FKTMTDVDVLDDGYKWRKYGQKVVKNTLHPR
Subjt:  PSPSSLWDERESFVRGRNGIGNYGGDDDNDEDRKPRLRVSTMKMKRIKGRKKVREPRFSFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPR

SwissProt top hitse value%identityAlignment
Q6B6R4 WRKY transcription factor WRKY242.3e-1144.09Show/hide
Query:  TPSPSSLWDERESFVRGRNGIGNYGGD--DDNDEDRKPRLRVSTMKMKRIKGRKKVREPRFSFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPR
        TP  SS     +    G    GN GGD  DD++ D K   +    +   + G + VREPR   +TM+D+D+LDDGY+WRKYGQKVVK   +PR
Subjt:  TPSPSSLWDERESFVRGRNGIGNYGGD--DDNDEDRKPRLRVSTMKMKRIKGRKKVREPRFSFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPR

Q6IEQ7 WRKY transcription factor WRKY242.3e-1144.09Show/hide
Query:  TPSPSSLWDERESFVRGRNGIGNYGGD--DDNDEDRKPRLRVSTMKMKRIKGRKKVREPRFSFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPR
        TP  SS     +    G    GN GGD  DD++ D K   +    +   + G + VREPR   +TM+D+D+LDDGY+WRKYGQKVVK   +PR
Subjt:  TPSPSSLWDERESFVRGRNGIGNYGGD--DDNDEDRKPRLRVSTMKMKRIKGRKKVREPRFSFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPR

Q8GY11 Probable WRKY transcription factor 433.0e-1170Show/hide
Query:  KKVREPRFSFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPR
        KK++ PRFSF+T +D D+LDDGY+WRKYGQK VKN+L+PR
Subjt:  KKVREPRFSFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPR

Q93WY4 Probable WRKY transcription factor 123.8e-1439.6Show/hide
Query:  NNNINVVEQSLKPFLFTTQQYFSHQQQSLFPFWFPASTTTPSHLLSSLNT-----PSPSSLWDERESFVRGRNGIGNYGGDDDNDEDRKPRLRVST----
        N N  V  +      F +    S      FP    +STTT    L   N      P  S + ++ +          N+GG  +ND       R ++    
Subjt:  NNNINVVEQSLKPFLFTTQQYFSHQQQSLFPFWFPASTTTPSHLLSSLNT-----PSPSSLWDERESFVRGRNGIGNYGGDDDNDEDRKPRLRVST----

Query:  MKMKRIKGRKKVREPRFSFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPR
        MK K +K R+K+REPRF F+T +DVDVLDDGYKWRKYGQKVVKN+LHPR
Subjt:  MKMKRIKGRKKVREPRFSFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPR

Q9SVB7 Probable WRKY transcription factor 135.7e-1876.92Show/hide
Query:  VSTMKMKRIKGRKKVREPRFSFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPR
        VS++KMK++K R+KVREPRF FKT+++VDVLDDGY+WRKYGQKVVKNT HPR
Subjt:  VSTMKMKRIKGRKKVREPRFSFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPR

Arabidopsis top hitse value%identityAlignment
AT2G44745.1 WRKY family transcription factor2.7e-1539.6Show/hide
Query:  NNNINVVEQSLKPFLFTTQQYFSHQQQSLFPFWFPASTTTPSHLLSSLNT-----PSPSSLWDERESFVRGRNGIGNYGGDDDNDEDRKPRLRVST----
        N N  V  +      F +    S      FP    +STTT    L   N      P  S + ++ +          N+GG  +ND       R ++    
Subjt:  NNNINVVEQSLKPFLFTTQQYFSHQQQSLFPFWFPASTTTPSHLLSSLNT-----PSPSSLWDERESFVRGRNGIGNYGGDDDNDEDRKPRLRVST----

Query:  MKMKRIKGRKKVREPRFSFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPR
        MK K +K R+K+REPRF F+T +DVDVLDDGYKWRKYGQKVVKN+LHPR
Subjt:  MKMKRIKGRKKVREPRFSFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPR

AT2G46130.1 WRKY DNA-binding protein 432.1e-1270Show/hide
Query:  KKVREPRFSFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPR
        KK++ PRFSF+T +D D+LDDGY+WRKYGQK VKN+L+PR
Subjt:  KKVREPRFSFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPR

AT2G46130.2 WRKY DNA-binding protein 431.8e-1168.42Show/hide
Query:  VREPRFSFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPR
        ++ PRFSF+T +D D+LDDGY+WRKYGQK VKN+L+PR
Subjt:  VREPRFSFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPR

AT4G39410.1 WRKY DNA-binding protein 134.0e-1976.92Show/hide
Query:  VSTMKMKRIKGRKKVREPRFSFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPR
        VS++KMK++K R+KVREPRF FKT+++VDVLDDGY+WRKYGQKVVKNT HPR
Subjt:  VSTMKMKRIKGRKKVREPRFSFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPR

AT5G56270.1 WRKY DNA-binding protein 21.8e-1144.29Show/hide
Query:  GNYGGDDDNDEDRKPRLRVSTMKMKRIKGRKKVREPRFSFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPR
        G  GG  + DE    R ++     +     + +REPR   +T +DVD+LDDGY+WRKYGQKVVK   +PR
Subjt:  GNYGGDDDNDEDRKPRLRVSTMKMKRIKGRKKVREPRFSFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGATCGAGAGAAATGGGGTCATCGGCGTCGGAAGAAGCGATAATGGTGAGTCTATTCCAAGCAGATCAAGAGGCGGCCGCCGTGAACACCGCCGCTATAACCACCAA
TTTCATATCTTTTCCTGAAAACAACAACAATAATAATATTAATGTTGTTGAACAATCCTTAAAACCCTTTTTGTTTACTACTCAACAATATTTCTCTCATCAACAACAAT
CCCTTTTCCCTTTTTGGTTCCCAGCTTCAACCACCACTCCCTCCCATCTCCTTTCCTCTCTAAACACTCCCTCTCCTTCCTCTCTCTGGGATGAAAGGGAGAGTTTTGTG
AGAGGGAGAAATGGGATTGGAAATTATGGCGGTGACGACGATAACGACGAAGACCGTAAGCCTCGGTTGAGGGTGTCCACGATGAAGATGAAGAGGATAAAAGGGAGGAA
GAAAGTGAGAGAGCCAAGATTCAGCTTCAAAACCATGACGGATGTGGATGTTCTTGACGATGGTTACAAATGGAGAAAGTACGGCCAAAAAGTTGTTAAGAACACCCTCC
ATCCAAGGTAA
mRNA sequenceShow/hide mRNA sequence
ATTTGGGCAAGTTTCTCTCTCTAGAACCAAAGTTAAAGAGAAAGAAGAAGAAAAAAAACCCTTTATCTCTAATGAACTATTTTGTTTCTGTGTGAAAGAGATGAGATCGA
GAGAAATGGGGTCATCGGCGTCGGAAGAAGCGATAATGGTGAGTCTATTCCAAGCAGATCAAGAGGCGGCCGCCGTGAACACCGCCGCTATAACCACCAATTTCATATCT
TTTCCTGAAAACAACAACAATAATAATATTAATGTTGTTGAACAATCCTTAAAACCCTTTTTGTTTACTACTCAACAATATTTCTCTCATCAACAACAATCCCTTTTCCC
TTTTTGGTTCCCAGCTTCAACCACCACTCCCTCCCATCTCCTTTCCTCTCTAAACACTCCCTCTCCTTCCTCTCTCTGGGATGAAAGGGAGAGTTTTGTGAGAGGGAGAA
ATGGGATTGGAAATTATGGCGGTGACGACGATAACGACGAAGACCGTAAGCCTCGGTTGAGGGTGTCCACGATGAAGATGAAGAGGATAAAAGGGAGGAAGAAAGTGAGA
GAGCCAAGATTCAGCTTCAAAACCATGACGGATGTGGATGTTCTTGACGATGGTTACAAATGGAGAAAGTACGGCCAAAAAGTTGTTAAGAACACCCTCCATCCAAGGTA
A
Protein sequenceShow/hide protein sequence
MRSREMGSSASEEAIMVSLFQADQEAAAVNTAAITTNFISFPENNNNNNINVVEQSLKPFLFTTQQYFSHQQQSLFPFWFPASTTTPSHLLSSLNTPSPSSLWDERESFV
RGRNGIGNYGGDDDNDEDRKPRLRVSTMKMKRIKGRKKVREPRFSFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPR