; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi01G011190 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G011190
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr01:9266412..9266810
RNA-Seq ExpressionLsi01G011190
SyntenyLsi01G011190
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025567.1 hypothetical protein E6C27_scaffold253G00560 [Cucumis melo var. makuwa]1.9e-4178.36Show/hide
Query:  MEEESSSSRNSEEILGAAQQLMQLSNDDDNSSNVAVVFAAKENQKRKKDHGGDGGGGGEEEVDQKRCQIESSIWLKIEEIFGKDDEEDCCDDHYYSI--S
        MEEESSSSRNSEE+LGAAQQLMQLSN DDNSSNV VV AAK+N+K+       GGGG EEEVDQKRCQIESSIWLKIEEIFGK DE  CCD H+ SI  S
Subjt:  MEEESSSSRNSEEILGAAQQLMQLSNDDDNSSNVAVVFAAKENQKRKKDHGGDGGGGGEEEVDQKRCQIESSIWLKIEEIFGKDDEEDCCDDHYYSI--S

Query:  RPKKRRFRSIQSIYMTTKPININGRFSAKTVVGN
        RPKKRRFRSIQSIYM TKP+  NGRFS KT+VGN
Subjt:  RPKKRRFRSIQSIYMTTKPININGRFSAKTVVGN

KAG6595108.1 hypothetical protein SDJN03_11661, partial [Cucurbita argyrosperma subsp. sororia]6.8e-3165.65Show/hide
Query:  MEEESSS-SRNSEEILGAAQQLMQLSNDDDNSSNVAVVFAAKENQKRKKDHGGDGGGGGEEEVDQKRCQIESSIWLKIEEIFGKDDEEDCCDDHYYSISR
        MEEESSS SRNSEE+L AAQQL+QLSN+DD+SSNV      K+ +  KK   G G GG EEEVDQKRCQIE+SI  KIEEIFGKDD++D  ++   SI R
Subjt:  MEEESSS-SRNSEEILGAAQQLMQLSNDDDNSSNVAVVFAAKENQKRKKDHGGDGGGGGEEEVDQKRCQIESSIWLKIEEIFGKDDEEDCCDDHYYSISR

Query:  PKKRRFRSIQSIYMTTKPININGRFSAKTVV
        P KRRFRSIQSIYM TKP+ +N RFS K +V
Subjt:  PKKRRFRSIQSIYMTTKPININGRFSAKTVV

KGN48398.1 hypothetical protein Csa_004350 [Cucumis sativus]2.8e-3279.13Show/hide
Query:  MEEESSSSRNSEEILGAAQQLMQLSNDDDNSSNVAVVFA-AKENQKRKKDHGGDGGGGG---EEEVDQKRCQIESSIWLKIEEIFGKDDEEDCCDDHYYS
        MEEESSSS NSEE+LGAAQQLMQLSN DDNSSNV VV A AK+N  +KKD GGDGGGGG   EEEVDQKRCQIESS+WLKIEEIFGKD+E D C  H+ S
Subjt:  MEEESSSSRNSEEILGAAQQLMQLSNDDDNSSNVAVVFA-AKENQKRKKDHGGDGGGGG---EEEVDQKRCQIESSIWLKIEEIFGKDDEEDCCDDHYYS

Query:  I--SRPKKRRFRSIQ
        I  SRPKKRRFRSIQ
Subjt:  I--SRPKKRRFRSIQ

XP_022133223.1 uncharacterized protein LOC111005872 [Momordica charantia]1.2e-3267.42Show/hide
Query:  MEEESSSSRNSEEILGAAQQLMQLSNDDDNSSNVAVVFAAKENQKRKKDHGGDGGGGGEEEVDQKRCQIESSIWLKIEEIFGKDDEEDCCDDHYYSISRP
        MEEESS SRN EE+LGAAQQLMQLSN+DD+SSNV      K N+KR       GG GGEEEVDQKRCQIE+SIW KIEEIFGK++EE   ++   SI RP
Subjt:  MEEESSSSRNSEEILGAAQQLMQLSNDDDNSSNVAVVFAAKENQKRKKDHGGDGGGGGEEEVDQKRCQIESSIWLKIEEIFGKDDEEDCCDDHYYSISRP

Query:  KKR--RFRSIQSIYMTTKPININGRFSAKTVV
        KKR  RFRSIQSIYMTTKPI IN RFS   ++
Subjt:  KKR--RFRSIQSIYMTTKPININGRFSAKTVV

XP_031742655.1 uncharacterized protein LOC116404425 [Cucumis sativus]1.1e-4178.99Show/hide
Query:  MEEESSSSRNSEEILGAAQQLMQLSNDDDNSSNVAVVFA-AKENQKRKKDHGGDGGGGG---EEEVDQKRCQIESSIWLKIEEIFGKDDEEDCCDDHYYS
        MEEESSSS NSEE+LGAAQQLMQLSN DDNSSNV VV A AK+N  +KKD GGDGGGGG   EEEVDQKRCQIESS+WLKIEEIFGKD+E D C  H+ S
Subjt:  MEEESSSSRNSEEILGAAQQLMQLSNDDDNSSNVAVVFA-AKENQKRKKDHGGDGGGGG---EEEVDQKRCQIESSIWLKIEEIFGKDDEEDCCDDHYYS

Query:  I--SRPKKRRFRSIQSIYMTTKPININGRFSAKTVVGN
        I  SRPKKRRFRSIQSIYM TKPI  NGRFS KT+VGN
Subjt:  I--SRPKKRRFRSIQSIYMTTKPININGRFSAKTVVGN

TrEMBL top hitse value%identityAlignment
A0A0A0KFU1 Uncharacterized protein1.3e-3279.13Show/hide
Query:  MEEESSSSRNSEEILGAAQQLMQLSNDDDNSSNVAVVFA-AKENQKRKKDHGGDGGGGG---EEEVDQKRCQIESSIWLKIEEIFGKDDEEDCCDDHYYS
        MEEESSSS NSEE+LGAAQQLMQLSN DDNSSNV VV A AK+N  +KKD GGDGGGGG   EEEVDQKRCQIESS+WLKIEEIFGKD+E D C  H+ S
Subjt:  MEEESSSSRNSEEILGAAQQLMQLSNDDDNSSNVAVVFA-AKENQKRKKDHGGDGGGGG---EEEVDQKRCQIESSIWLKIEEIFGKDDEEDCCDDHYYS

Query:  I--SRPKKRRFRSIQ
        I  SRPKKRRFRSIQ
Subjt:  I--SRPKKRRFRSIQ

A0A5A7SLI9 Uncharacterized protein9.2e-4278.36Show/hide
Query:  MEEESSSSRNSEEILGAAQQLMQLSNDDDNSSNVAVVFAAKENQKRKKDHGGDGGGGGEEEVDQKRCQIESSIWLKIEEIFGKDDEEDCCDDHYYSI--S
        MEEESSSSRNSEE+LGAAQQLMQLSN DDNSSNV VV AAK+N+K+       GGGG EEEVDQKRCQIESSIWLKIEEIFGK DE  CCD H+ SI  S
Subjt:  MEEESSSSRNSEEILGAAQQLMQLSNDDDNSSNVAVVFAAKENQKRKKDHGGDGGGGGEEEVDQKRCQIESSIWLKIEEIFGKDDEEDCCDDHYYSI--S

Query:  RPKKRRFRSIQSIYMTTKPININGRFSAKTVVGN
        RPKKRRFRSIQSIYM TKP+  NGRFS KT+VGN
Subjt:  RPKKRRFRSIQSIYMTTKPININGRFSAKTVVGN

A0A6J1BYI0 uncharacterized protein LOC1110058726.0e-3367.42Show/hide
Query:  MEEESSSSRNSEEILGAAQQLMQLSNDDDNSSNVAVVFAAKENQKRKKDHGGDGGGGGEEEVDQKRCQIESSIWLKIEEIFGKDDEEDCCDDHYYSISRP
        MEEESS SRN EE+LGAAQQLMQLSN+DD+SSNV      K N+KR       GG GGEEEVDQKRCQIE+SIW KIEEIFGK++EE   ++   SI RP
Subjt:  MEEESSSSRNSEEILGAAQQLMQLSNDDDNSSNVAVVFAAKENQKRKKDHGGDGGGGGEEEVDQKRCQIESSIWLKIEEIFGKDDEEDCCDDHYYSISRP

Query:  KKR--RFRSIQSIYMTTKPININGRFSAKTVV
        KKR  RFRSIQSIYMTTKPI IN RFS   ++
Subjt:  KKR--RFRSIQSIYMTTKPININGRFSAKTVV

A0A6J1GFL5 uncharacterized protein LOC1114537261.2e-2867.74Show/hide
Query:  NSEEILGAAQQLMQLS----NDDDN-SSNVAVVFAAKENQKRKKDHGGD-GGGGGEEEVDQKRCQIESSIWLKIEEIFGKDDEEDCCDDHYYSISRPKKR
        +SEE+L AAQ LMQLS    +DDDN SSNV V     +N+K KK HGGD G GG EEEVDQKR QIE+SIWLKIEEIFGKDDEE      + SI RPKKR
Subjt:  NSEEILGAAQQLMQLS----NDDDN-SSNVAVVFAAKENQKRKKDHGGD-GGGGGEEEVDQKRCQIESSIWLKIEEIFGKDDEEDCCDDHYYSISRPKKR

Query:  RFRSIQSIYMTTKPININGRFSAK
        RFRS+QSIY+TTKPI  NGRF A+
Subjt:  RFRSIQSIYMTTKPININGRFSAK

A0A6J5V3C5 Uncharacterized protein6.5e-1145.3Show/hide
Query:  SEEILGAAQQLMQLSNDDDNSSNVAVVFAAKENQKRKKDHGGDGGGGGEEEVDQKRCQIESSIWLKIEEIFGKDDEEDCCDDHYYSISRPKKRRFRSIQS
        +E  L AAQQLMQLS D+DN++N +   +++ N+  K  H G       EEVDQ R  I   IW KIEEIFGK+++ D          RPKKRR+RS+ S
Subjt:  SEEILGAAQQLMQLSNDDDNSSNVAVVFAAKENQKRKKDHGGDGGGGGEEEVDQKRCQIESSIWLKIEEIFGKDDEEDCCDDHYYSISRPKKRRFRSIQS

Query:  IYMTTKPININGRFSAK
        IY+T+KP+N       K
Subjt:  IYMTTKPININGRFSAK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G09876.1 unknown protein4.0e-0544.23Show/hide
Query:  IEEIFGKDD--EEDCCDDHYY------SISRPKKRRFRSIQSIYMTTKPINI
        IEEIFGKDD  ++D C +         S+ + KK+++R+I+SIYM T+PI +
Subjt:  IEEIFGKDD--EEDCCDDHYY------SISRPKKRRFRSIQSIYMTTKPINI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAAGAATCGTCGAGTTCGCGTAATTCGGAGGAGATATTGGGTGCGGCGCAGCAGTTGATGCAGCTGAGCAATGACGACGATAATAGCAGCAATGTCGCCGTCGT
TTTCGCTGCGAAGGAGAACCAGAAGAGAAAAAAGGATCACGGCGGTGATGGCGGCGGCGGCGGAGAGGAGGAGGTTGATCAAAAGAGATGCCAAATTGAGTCATCAATTT
GGTTGAAAATAGAAGAGATTTTTGGGAAAGATGATGAAGAAGATTGTTGTGATGATCATTATTATTCTATTTCTCGTCCTAAGAAGAGACGATTTCGGTCCATTCAAAGC
ATATATATGACGACTAAACCCATCAATATTAATGGTAGATTCTCCGCCAAGACCGTCGTCGGGAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGAAGAATCGTCGAGTTCGCGTAATTCGGAGGAGATATTGGGTGCGGCGCAGCAGTTGATGCAGCTGAGCAATGACGACGATAATAGCAGCAATGTCGCCGTCGT
TTTCGCTGCGAAGGAGAACCAGAAGAGAAAAAAGGATCACGGCGGTGATGGCGGCGGCGGCGGAGAGGAGGAGGTTGATCAAAAGAGATGCCAAATTGAGTCATCAATTT
GGTTGAAAATAGAAGAGATTTTTGGGAAAGATGATGAAGAAGATTGTTGTGATGATCATTATTATTCTATTTCTCGTCCTAAGAAGAGACGATTTCGGTCCATTCAAAGC
ATATATATGACGACTAAACCCATCAATATTAATGGTAGATTCTCCGCCAAGACCGTCGTCGGGAATTGA
Protein sequenceShow/hide protein sequence
MEEESSSSRNSEEILGAAQQLMQLSNDDDNSSNVAVVFAAKENQKRKKDHGGDGGGGGEEEVDQKRCQIESSIWLKIEEIFGKDDEEDCCDDHYYSISRPKKRRFRSIQS
IYMTTKPININGRFSAKTVVGN