; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi01G011220 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G011220
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionWD repeat domain-containing protein 83
Genome locationchr01:9297752..9300533
RNA-Seq ExpressionLsi01G011220
SyntenyLsi01G011220
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0071013 - catalytic step 2 spliceosome (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR001680 - WD40 repeat
IPR015943 - WD40/YVTN repeat-like-containing domain superfamily
IPR036322 - WD40-repeat-containing domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025565.1 WD repeat domain-containing protein 83 [Cucumis melo var. makuwa]1.2e-15698.16Show/hide
Query:  MSVAELPTKEGNVLKGHEGGVLAARFNSDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTSDNSKLCSCGGDRQVFYWDVSTGRVIRKFRG
        MSV+ELPTKE NVLKGHEGGVLAARFNSDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVT DNSKLCSCGGDRQVFYWDVSTGRVIRKFRG
Subjt:  MSVAELPTKEGNVLKGHEGGVLAARFNSDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTSDNSKLCSCGGDRQVFYWDVSTGRVIRKFRG

Query:  HDGEVNAVKFNEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDMRIGREISDNLGQPVNCISMSNDANCIL
        HDGEVNAVKFNEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDMRIGREISDNLGQPVNCISMSNDANCIL
Subjt:  HDGEVNAVKFNEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDMRIGREISDNLGQPVNCISMSNDANCIL

Query:  ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDAHVTGGSEDGFIYFWDLVDASIVSKFRAHSSV
        ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDAHVTGGSEDGF+YFWDLVDAS+VSKFRAHSSV
Subjt:  ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDAHVTGGSEDGFIYFWDLVDASIVSKFRAHSSV

KAG6604265.1 WD repeat domain-containing protein 83, partial [Cucurbita argyrosperma subsp. sororia]5.4e-15790.94Show/hide
Query:  MSVAELPTKEGNVLKGHEGGVLAARFNSDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTSDNSKLCSCGGDRQVFYWDVSTGRVIRKFRG
        MSV+ELPTKE NVLKGHEGGVLAARFNSDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVT DNSKLCSCGGDRQVFYWDVSTGRVIRKFRG
Subjt:  MSVAELPTKEGNVLKGHEGGVLAARFNSDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTSDNSKLCSCGGDRQVFYWDVSTGRVIRKFRG

Query:  HDGEVNAVKFNEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDMRIGREISDNLGQPVNCISMSNDANCIL
        HDGEVNAVKFNEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDMRIGREISDNLGQPVNCISMSNDANCIL
Subjt:  HDGEVNAVKFNEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDMRIGREISDNLGQPVNCISMSNDANCIL

Query:  ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDAHVTGGSEDGFIYFWDLVDASIVSKFRAHSSVGCADNLLGTTKLSLGQNHKHIFYLVP
        ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDAHVTGGSEDG+IYFWDLVDAS+VSKFRAHSSV     +  T +   G++    F  +P
Subjt:  ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDAHVTGGSEDGFIYFWDLVDASIVSKFRAHSSVGCADNLLGTTKLSLGQNHKHIFYLVP

XP_008440996.1 PREDICTED: WD repeat domain-containing protein 83 [Cucumis melo]1.2e-15698.16Show/hide
Query:  MSVAELPTKEGNVLKGHEGGVLAARFNSDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTSDNSKLCSCGGDRQVFYWDVSTGRVIRKFRG
        MSV+ELPTKE NVLKGHEGGVLAARFNSDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVT DNSKLCSCGGDRQVFYWDVSTGRVIRKFRG
Subjt:  MSVAELPTKEGNVLKGHEGGVLAARFNSDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTSDNSKLCSCGGDRQVFYWDVSTGRVIRKFRG

Query:  HDGEVNAVKFNEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDMRIGREISDNLGQPVNCISMSNDANCIL
        HDGEVNAVKFNEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDMRIGREISDNLGQPVNCISMSNDANCIL
Subjt:  HDGEVNAVKFNEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDMRIGREISDNLGQPVNCISMSNDANCIL

Query:  ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDAHVTGGSEDGFIYFWDLVDASIVSKFRAHSSV
        ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDAHVTGGSEDGF+YFWDLVDAS+VSKFRAHSSV
Subjt:  ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDAHVTGGSEDGFIYFWDLVDASIVSKFRAHSSV

XP_022949610.1 WD repeat domain-containing protein 83 [Cucurbita moschata]2.7e-15697.79Show/hide
Query:  MSVAELPTKEGNVLKGHEGGVLAARFNSDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTSDNSKLCSCGGDRQVFYWDVSTGRVIRKFRG
        MSV+ELPTKE NVLKGHEGGVLAARFNSDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVT DNSKLCSCGGDRQVFYWDVSTGRVIRKFRG
Subjt:  MSVAELPTKEGNVLKGHEGGVLAARFNSDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTSDNSKLCSCGGDRQVFYWDVSTGRVIRKFRG

Query:  HDGEVNAVKFNEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDMRIGREISDNLGQPVNCISMSNDANCIL
        HDGEVNAVKFNEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDMRIGREISDNLGQPVNCISMSNDANC+L
Subjt:  HDGEVNAVKFNEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDMRIGREISDNLGQPVNCISMSNDANCIL

Query:  ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDAHVTGGSEDGFIYFWDLVDASIVSKFRAHSSV
        ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDAHVTGGSEDG+IYFWDLVDAS+VSKFRAHSSV
Subjt:  ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDAHVTGGSEDGFIYFWDLVDASIVSKFRAHSSV

XP_038880882.1 WD repeat domain-containing protein 83 [Benincasa hispida]3.5e-15698.16Show/hide
Query:  MSVAELPTKEGNVLKGHEGGVLAARFNSDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTSDNSKLCSCGGDRQVFYWDVSTGRVIRKFRG
        MSV+ELPTKE NVLKGHEGGVLAARFNSDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVT DNSKLCSCGGDRQVFYWDVSTGRVIRKFRG
Subjt:  MSVAELPTKEGNVLKGHEGGVLAARFNSDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTSDNSKLCSCGGDRQVFYWDVSTGRVIRKFRG

Query:  HDGEVNAVKFNEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDMRIGREISDNLGQPVNCISMSNDANCIL
        HDGEVNAVKFNEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDMRIGREISDNLG PVNCISMSNDANCIL
Subjt:  HDGEVNAVKFNEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDMRIGREISDNLGQPVNCISMSNDANCIL

Query:  ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDAHVTGGSEDGFIYFWDLVDASIVSKFRAHSSV
        ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDAHVTGGSEDGFIYFWDLVDAS+VSKFRAHSSV
Subjt:  ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDAHVTGGSEDGFIYFWDLVDASIVSKFRAHSSV

TrEMBL top hitse value%identityAlignment
A0A0A0KFA7 WD_REPEATS_REGION domain-containing protein4.9e-15697.79Show/hide
Query:  MSVAELPTKEGNVLKGHEGGVLAARFNSDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTSDNSKLCSCGGDRQVFYWDVSTGRVIRKFRG
        MSV+ELPTKE NVLKGHEGGVLAARFNSDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVT DNSKLCSCGGDRQVFYWDVSTGRVIRKFRG
Subjt:  MSVAELPTKEGNVLKGHEGGVLAARFNSDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTSDNSKLCSCGGDRQVFYWDVSTGRVIRKFRG

Query:  HDGEVNAVKFNEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDMRIGREISDNLGQPVNCISMSNDANCIL
        HDGEVNAVKFNEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDMRIGREISDNLGQ VNCISMSNDANCIL
Subjt:  HDGEVNAVKFNEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDMRIGREISDNLGQPVNCISMSNDANCIL

Query:  ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDAHVTGGSEDGFIYFWDLVDASIVSKFRAHSSV
        ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDAHVTGGSEDGF+YFWDLVDAS+VSKFRAHSSV
Subjt:  ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDAHVTGGSEDGFIYFWDLVDASIVSKFRAHSSV

A0A1S3B1Y9 WD repeat domain-containing protein 835.8e-15798.16Show/hide
Query:  MSVAELPTKEGNVLKGHEGGVLAARFNSDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTSDNSKLCSCGGDRQVFYWDVSTGRVIRKFRG
        MSV+ELPTKE NVLKGHEGGVLAARFNSDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVT DNSKLCSCGGDRQVFYWDVSTGRVIRKFRG
Subjt:  MSVAELPTKEGNVLKGHEGGVLAARFNSDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTSDNSKLCSCGGDRQVFYWDVSTGRVIRKFRG

Query:  HDGEVNAVKFNEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDMRIGREISDNLGQPVNCISMSNDANCIL
        HDGEVNAVKFNEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDMRIGREISDNLGQPVNCISMSNDANCIL
Subjt:  HDGEVNAVKFNEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDMRIGREISDNLGQPVNCISMSNDANCIL

Query:  ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDAHVTGGSEDGFIYFWDLVDASIVSKFRAHSSV
        ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDAHVTGGSEDGF+YFWDLVDAS+VSKFRAHSSV
Subjt:  ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDAHVTGGSEDGFIYFWDLVDASIVSKFRAHSSV

A0A5D3CQ40 WD repeat domain-containing protein 835.8e-15798.16Show/hide
Query:  MSVAELPTKEGNVLKGHEGGVLAARFNSDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTSDNSKLCSCGGDRQVFYWDVSTGRVIRKFRG
        MSV+ELPTKE NVLKGHEGGVLAARFNSDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVT DNSKLCSCGGDRQVFYWDVSTGRVIRKFRG
Subjt:  MSVAELPTKEGNVLKGHEGGVLAARFNSDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTSDNSKLCSCGGDRQVFYWDVSTGRVIRKFRG

Query:  HDGEVNAVKFNEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDMRIGREISDNLGQPVNCISMSNDANCIL
        HDGEVNAVKFNEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDMRIGREISDNLGQPVNCISMSNDANCIL
Subjt:  HDGEVNAVKFNEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDMRIGREISDNLGQPVNCISMSNDANCIL

Query:  ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDAHVTGGSEDGFIYFWDLVDASIVSKFRAHSSV
        ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDAHVTGGSEDGF+YFWDLVDAS+VSKFRAHSSV
Subjt:  ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDAHVTGGSEDGFIYFWDLVDASIVSKFRAHSSV

A0A6J1GD83 WD repeat domain-containing protein 831.3e-15697.79Show/hide
Query:  MSVAELPTKEGNVLKGHEGGVLAARFNSDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTSDNSKLCSCGGDRQVFYWDVSTGRVIRKFRG
        MSV+ELPTKE NVLKGHEGGVLAARFNSDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVT DNSKLCSCGGDRQVFYWDVSTGRVIRKFRG
Subjt:  MSVAELPTKEGNVLKGHEGGVLAARFNSDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTSDNSKLCSCGGDRQVFYWDVSTGRVIRKFRG

Query:  HDGEVNAVKFNEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDMRIGREISDNLGQPVNCISMSNDANCIL
        HDGEVNAVKFNEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDMRIGREISDNLGQPVNCISMSNDANC+L
Subjt:  HDGEVNAVKFNEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDMRIGREISDNLGQPVNCISMSNDANCIL

Query:  ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDAHVTGGSEDGFIYFWDLVDASIVSKFRAHSSV
        ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDAHVTGGSEDG+IYFWDLVDAS+VSKFRAHSSV
Subjt:  ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDAHVTGGSEDGFIYFWDLVDASIVSKFRAHSSV

A0A6J1IRS5 WD repeat domain-containing protein 831.4e-15597.43Show/hide
Query:  MSVAELPTKEGNVLKGHEGGVLAARFNSDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTSDNSKLCSCGGDRQVFYWDVSTGRVIRKFRG
        MSV+ELPTKE NVLKGHEGGVLAARFNSDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVT DNSKLCSCGGDRQVFYWDVSTGRVIRKFRG
Subjt:  MSVAELPTKEGNVLKGHEGGVLAARFNSDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTSDNSKLCSCGGDRQVFYWDVSTGRVIRKFRG

Query:  HDGEVNAVKFNEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDMRIGREISDNLGQPVNCISMSNDANCIL
        HDGEVNAVKFNE ASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDMRIGREISDNLGQPVNCISMSNDANC+L
Subjt:  HDGEVNAVKFNEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDMRIGREISDNLGQPVNCISMSNDANCIL

Query:  ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDAHVTGGSEDGFIYFWDLVDASIVSKFRAHSSV
        ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDAHVTGGSEDG+IYFWDLVDAS+VSKFRAHSSV
Subjt:  ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDAHVTGGSEDGFIYFWDLVDASIVSKFRAHSSV

SwissProt top hitse value%identityAlignment
Q3KQ62 WD repeat domain-containing protein 835.3e-8352.61Show/hide
Query:  ELPTKEGNVLKGHEGGVLAARFNSDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTSDNSKLCSCGGDRQVFYWDVSTGRVIRKFRGHDGE
        ELP K  + L+ ++G V A RFN DGNYC++CG D++++LWNPH+G  +KTY  HG EV D   + DNS+LCSC  D+ V  WDV+ G+V+RKFRGH G+
Subjt:  ELPTKEGNVLKGHEGGVLAARFNSDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTSDNSKLCSCGGDRQVFYWDVSTGRVIRKFRGHDGE

Query:  VNAVKFNEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDMRIGREISDNLGQPVNCISMSNDANCILASCL
        VN V+FNE A+V++S   D S+R WDCRS   + IQI+D   D + SV ++  EI+ GSVDG +R +D+R G   +D LG P+ C+S S D+ C+LAS L
Subjt:  VNAVKFNEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDMRIGREISDNLGQPVNCISMSNDANCILASCL

Query:  DSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDAHVTGGSEDGFIYFWDLVDASIVSKFRAHSSV
        DSTLRLLD+ +GELL EY GH   SYKLD CL+  D HV   SEDG + FWDLV+ S+V K     +V
Subjt:  DSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDAHVTGGSEDGFIYFWDLVDASIVSKFRAHSSV

Q5BLX8 WD repeat domain-containing protein 831.5e-8252.99Show/hide
Query:  ELPTKEGNVLKGHEGGVLAARFNSDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTSDNSKLCSCGGDRQVFYWDVSTGRVIRKFRGHDGE
        ELP K+   L   +G V A RFN DGNYCL+CG D+T++LWNP RG  ++TY  HG EV D   + DNS LCS GGD+ V  WDV+TG+V+RKFRGH G+
Subjt:  ELPTKEGNVLKGHEGGVLAARFNSDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTSDNSKLCSCGGDRQVFYWDVSTGRVIRKFRGHDGE

Query:  VNAVKFNEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDMRIGREISDNLGQPVNCISMSNDANCILASCL
        VN V+FNE A+V++S   D S+R WDCRS   EP+Q +D   D + SV ++  EI+ GSVDG VR +D+R+G+  SD +G P+ C   S D  C L S L
Subjt:  VNAVKFNEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDMRIGREISDNLGQPVNCISMSNDANCILASCL

Query:  DSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDAHVTGGSEDGFIYFWDLVDASIVSKFRAHSSV
        DSTLRLLD+ +GELL EY GH  + YKLDCCL+  D HV   SEDG ++FWDLV+ S+       S+V
Subjt:  DSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDAHVTGGSEDGFIYFWDLVDASIVSKFRAHSSV

Q5XGI5 WD repeat domain-containing protein 832.4e-8353.64Show/hide
Query:  ELPTKEGNVLKGHEGGVLAARFNSDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTSDNSKLCSCGGDRQVFYWDVSTGRVIRKFRGHDGE
        ELP K  + L+ ++G V A RFN DGNYC++CG D+T++LWNPH+G  +KTY  HG EV D   + DNS++CSC  D+ V  WDV+ G+V+RKFRGH G+
Subjt:  ELPTKEGNVLKGHEGGVLAARFNSDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTSDNSKLCSCGGDRQVFYWDVSTGRVIRKFRGHDGE

Query:  VNAVKFNEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDMRIGREISDNLGQPVNCISMSNDANCILASCL
        VN V+FNE A+V++S   D S+R WDCRS   E IQI+D   D + S+ ++  EI+ GSVDG +R +D+R G   +D LG P+ C+S S D+ C+LAS L
Subjt:  VNAVKFNEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDMRIGREISDNLGQPVNCISMSNDANCILASCL

Query:  DSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDAHVTGGSEDGFIYFWDLVDASIVSK
        DSTLRLLD+ +GELL EY GH   SYKLD CL+  D HV   SEDG + FWDLV+ S+V K
Subjt:  DSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDAHVTGGSEDGFIYFWDLVDASIVSK

Q9BRX9 WD repeat domain-containing protein 831.5e-8252.99Show/hide
Query:  ELPTKEGNVLKGHEGGVLAARFNSDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTSDNSKLCSCGGDRQVFYWDVSTGRVIRKFRGHDGE
        ELP K    L   +G V A RFN DGNYCL+CG D+T++LWNP RG  ++TY  HG EV D   + DNS LCS GGD+ V  WDV++G+V+RKFRGH G+
Subjt:  ELPTKEGNVLKGHEGGVLAARFNSDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTSDNSKLCSCGGDRQVFYWDVSTGRVIRKFRGHDGE

Query:  VNAVKFNEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDMRIGREISDNLGQPVNCISMSNDANCILASCL
        VN V+FNE A+V++S   D S+R WDCRS   EP+Q +D   D V SV ++  EI+ GSVDG VR +D+R+G+  SD +G P+ C   S D  C L S L
Subjt:  VNAVKFNEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDMRIGREISDNLGQPVNCISMSNDANCILASCL

Query:  DSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDAHVTGGSEDGFIYFWDLVDASIVSKFRAHSSV
        DSTLRLLD+ +GELL EYKGH  + YKLDCCL+  D HV   SEDG ++FWDLV+ ++       S V
Subjt:  DSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDAHVTGGSEDGFIYFWDLVDASIVSKFRAHSSV

Q9DAJ4 WD repeat domain-containing protein 834.5e-8252.61Show/hide
Query:  ELPTKEGNVLKGHEGGVLAARFNSDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTSDNSKLCSCGGDRQVFYWDVSTGRVIRKFRGHDGE
        ELP K    L   +G V A RFN DGNYCL+CG D+T++LWNP RG  ++TY  HG EV D   + DNS LCS GGD+ V  WDV+TG+V+RKFRGH G+
Subjt:  ELPTKEGNVLKGHEGGVLAARFNSDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTSDNSKLCSCGGDRQVFYWDVSTGRVIRKFRGHDGE

Query:  VNAVKFNEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDMRIGREISDNLGQPVNCISMSNDANCILASCL
        VN V+FNE A+V++S   D S+R WDCRS   EP+Q +D   D + SV ++  EI+ GSVDG VR +D+R+G+  SD +G P+ C   S D  C L S L
Subjt:  VNAVKFNEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDMRIGREISDNLGQPVNCISMSNDANCILASCL

Query:  DSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDAHVTGGSEDGFIYFWDLVDASIVSKFRAHSSV
        DSTLRLLD+ +GELL EY GH  + YKLDCCL+  D HV   SEDG ++FWDLV+ ++       S+V
Subjt:  DSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDAHVTGGSEDGFIYFWDLVDASIVSKFRAHSSV

Arabidopsis top hitse value%identityAlignment
AT2G43770.1 Transducin/WD40 repeat-like superfamily protein1.3e-2327.57Show/hide
Query:  VLKGHEGGVLAARFNSDGNYCLSCGKDRTIRLWNPHRGI-HIKTYKSHGREVRDVHVTSDNSKLCSCGGDRQVFYWDVSTGRVIRKFRGHDGEVNA-VKF
        +L GH   V   +FN  G    S   DR I LW  H    +    K H   + D+H TSD S++ S   D+ V  WDV TG+ I+K   H   VN+    
Subjt:  VLKGHEGGVLAARFNSDGNYCLSCGKDRTIRLWNPHRGI-HIKTYKSHGREVRDVHVTSDNSKLCSCGGDRQVFYWDVSTGRVIRKFRGHDGEVNA-VKF

Query:  NEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSE----IIGGSVDGTVRTFDMRIGREISDNLG--QPVNCISMSNDANCILASCL
             +++S   D + + WD R         I TF D      ++ S+    I  G VD  V+ +D+R G       G    +  +S+S D + +L + +
Subjt:  NEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSE----IIGGSVDGTVRTFDMRIGREISDNLG--QPVNCISMSNDANCILASCL

Query:  DSTLRLLD----RSSGELLQEYKGHTCKSYK--LDCCLTNTDAHVTGGSEDGFIYFWDLVDASIVSKFRAHS
        D+ L + D          ++ ++GH     K  L C  +     VT GS D  ++ WD      + K   H+
Subjt:  DSTLRLLD----RSSGELLQEYKGHTCKSYK--LDCCLTNTDAHVTGGSEDGFIYFWDLVDASIVSKFRAHS

AT3G49660.1 Transducin/WD40 repeat-like superfamily protein1.3e-3128.14Show/hide
Query:  PTKEGNVLKGHEGGVLAARFNSDGNYCLSCGKDRTIRLW-----NPHRGIHIKTYKSHGREVRDVHVTSDNSKLCSCGGDRQVFYWDVSTGRVIRKFRGH
        P      L  H   V + +F+SDG    S   D+TIR +     N      ++ +  H   + DV  +SD   + S   D+ +  WDV TG +I+   GH
Subjt:  PTKEGNVLKGHEGGVLAARFNSDGNYCLSCGKDRTIRLW-----NPHRGIHIKTYKSHGREVRDVHVTSDNSKLCSCGGDRQVFYWDVSTGRVIRKFRGH

Query:  DGEVNAVKFNEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTK--SEIIGGSVDGTVRTFDMRIG---REISDNLGQPVNCISMSNDA
              V FN  ++++VS  +D+++R WD  +     ++++   SD V +V   +  S I+  S DG  R +D   G   + + D+   PV+ +  S + 
Subjt:  DGEVNAVKFNEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTK--SEIIGGSVDGTVRTFDMRIG---REISDNLGQPVNCISMSNDA

Query:  NCILASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDA-HVTGGSEDGFIYFWDLVDASIVSKFRAHS----SVGC--ADNLLGTTKL
          IL   LD+TLRL + SS + L+ Y GH    Y +    + T+   +  GSED  ++ W+L    ++ K   H+    +V C   +NL+ +  L
Subjt:  NCILASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDA-HVTGGSEDGFIYFWDLVDASIVSKFRAHS----SVGC--ADNLLGTTKL

AT4G02730.1 Transducin/WD40 repeat-like superfamily protein4.4e-3228.67Show/hide
Query:  PTKEGNVLKGHEGGVLAARFNSDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTSDNSKLCSCGGDRQVFYWDV-STGRVIRKFRGHDGEV
        P +    L+GH   +   +F++DGN   S   D+T+ LW+      I  Y+ H   + D+  +SD+   CS   D  +  WD  S    ++  RGH   V
Subjt:  PTKEGNVLKGHEGGVLAARFNSDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTSDNSKLCSCGGDRQVFYWDV-STGRVIRKFRGHDGEV

Query:  NAVKFNEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTK--SEIIGGSVDGTVRTFDMRIG---REISDNLGQPVNCISMSNDANCIL
          V FN  ++++VS  +D+++R W+ ++     +++I   S  + SV   +  S I+  S DG+ + +D + G   + + D+    V+    S +   IL
Subjt:  NAVKFNEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTK--SEIIGGSVDGTVRTFDMRIG---REISDNLGQPVNCISMSNDANCIL

Query:  ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDA-HVTGGSEDGFIYFWDLVDASIVSKFRAHS----SVGC
         + LDSTL+L + ++G+ L+ Y GHT K + +    + T+  ++  GSED  +Y WDL   +I+ +   H+    SV C
Subjt:  ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDA-HVTGGSEDGFIYFWDLVDASIVSKFRAHS----SVGC

AT5G50230.1 Transducin/WD40 repeat-like superfamily protein5.4e-3028.47Show/hide
Query:  LPTKEGNVLKGHEGGVLAARFNSDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTSDNSKLCSCGGDRQVFYWDVSTGRVIRKFRGHDGEV
        +P+   N +  HEGG  +  F  +     + G+DR +++W+ + G  IK+       + D+ VT DN  + +      +F WDVS+GRV     GH  +V
Subjt:  LPTKEGNVLKGHEGGVLAARFNSDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTSDNSKLCSCGGDRQVFYWDVSTGRVIRKFRGHDGEV

Query:  NAVKFNEYAS-VVVSAGYDQSLRAWDC-RSHSTEPIQIIDTFSDSVMSVCLTKS--EIIGGSVDGTVRTFDMRIGREISDNLG--QPVNCISMSNDANCI
         AV  ++++S  VVSA YD++++ WD  + + T  +     F+ +  ++CL+     +  G +DG +R +D++ G+ +S+  G    V  +S+S + N I
Subjt:  NAVKFNEYAS-VVVSAGYDQSLRAWDC-RSHSTEPIQIIDTFSDSVMSVCLTKS--EIIGGSVDGTVRTFDMRIGREISDNLG--QPVNCISMSNDANCI

Query:  LASCLDSTLRLLDRSSGELLQEYK--GHTCKSYKLDCCLTNTDAHVTGGSEDGFIYFWDLVDASIVSKFRAHSS
        L S  D+   + D  + E+    +  G+   S     C++  D +V  GS DG ++ W L   +IVS  +  +S
Subjt:  LASCLDSTLRLLDRSSGELLQEYK--GHTCKSYKLDCCLTNTDAHVTGGSEDGFIYFWDLVDASIVSKFRAHSS

AT5G64730.1 Transducin/WD40 repeat-like superfamily protein4.5e-13882.72Show/hide
Query:  MSVAELPTKEGNVLKGHEGGVLAARFNSDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTSDNSKLCSCGGDRQVFYWDVSTGRVIRKFRG
        MS  ELPTKE ++LKGHEG VLAARFN DGNY L+CGKDRTIRLWNPHRGI IKTYKSHGREVRDVHVTSDN+K CSCGGDRQV+YWDVSTGRVIRKFRG
Subjt:  MSVAELPTKEGNVLKGHEGGVLAARFNSDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTSDNSKLCSCGGDRQVFYWDVSTGRVIRKFRG

Query:  HDGEVNAVKFNEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDMRIGREISDNLGQPVNCISMSNDANCIL
        HDGEVNAVKFN+ +SVVVSAG+D+SLR WDCRSHS EP+QIIDTF D+VMSV LTK+EIIGGSVDGTVRTFDMRIGRE+SDNLGQPVNCIS+SND NC+L
Subjt:  HDGEVNAVKFNEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDMRIGREISDNLGQPVNCISMSNDANCIL

Query:  ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDAHVTGGSEDGFIYFWDLVDASIVSKFRAHSSV
        A CLDSTLRLLDR++GELLQ YKGH  KS+K DCCLTN+DAHV GGSEDG ++FWDLVDA ++SKFRAH  V
Subjt:  ASCLDSTLRLLDRSSGELLQEYKGHTCKSYKLDCCLTNTDAHVTGGSEDGFIYFWDLVDASIVSKFRAHSSV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGTCGCAGAACTACCGACGAAGGAGGGCAATGTTTTGAAAGGGCATGAAGGTGGAGTTCTTGCTGCAAGGTTCAATAGCGACGGCAATTACTGCCTCAGCTGTGG
CAAGGATCGCACAATTCGCCTCTGGAATCCTCACCGTGGTATTCACATCAAGACCTACAAATCACATGGCCGTGAAGTCCGCGACGTCCATGTCACCTCAGACAACTCTA
AGTTATGTTCATGCGGCGGTGATCGCCAAGTCTTCTATTGGGATGTTTCTACTGGCCGCGTTATTCGAAAATTTCGGGGCCATGATGGCGAGGTGAATGCTGTGAAATTT
AATGAGTATGCTTCTGTCGTAGTCTCAGCAGGCTATGATCAATCATTGCGTGCTTGGGACTGCAGATCTCATAGCACTGAGCCAATTCAGATCATTGATACATTTTCAGA
CAGTGTAATGTCTGTTTGCTTAACAAAAAGTGAAATTATTGGAGGAAGTGTTGATGGTACTGTTCGAACATTTGACATGCGAATTGGCAGAGAAATATCAGATAACTTGG
GGCAGCCTGTAAATTGTATCTCCATGTCCAACGATGCTAATTGCATATTAGCTAGTTGCTTAGATTCAACTCTCCGTCTATTGGACAGGTCTTCTGGTGAGCTATTACAA
GAATACAAGGGCCATACTTGTAAGTCTTACAAGCTGGATTGCTGCCTTACCAATACTGATGCACATGTAACTGGCGGATCTGAGGATGGATTCATTTATTTCTGGGATTT
AGTAGATGCATCTATTGTCTCCAAGTTTCGAGCTCATTCCTCTGTTGGATGTGCTGACAATCTGTTGGGCACAACAAAATTGTCGTTGGGCCAAAATCACAAACACATTT
TCTACTTGGTACCAAGATCTCCAATCAACCTGCCATCTATCTGCACATTCGAGAAGCTGGATAAAATTTACTTGAAGGCACCAATACAAGCACCTGACAAGATTGAAATC
ACTCGGCAGAAGACTTGA
mRNA sequenceShow/hide mRNA sequence
AAATTATTTCTTTTAGGTCACTTTTCACTCTATTCAGTGTGTGTATATATATTTCCCGTCTTCCTAATTCCTTACAGGCAGTTGAATTTTCAGTACACTCCCGCCATCTT
ATAATGATTCTCACTGAAAGAAGCAAACTCTAAACCCAGAGAAGAAGAAACATGAGTGTCGCAGAACTACCGACGAAGGAGGGCAATGTTTTGAAAGGGCATGAAGGTGG
AGTTCTTGCTGCAAGGTTCAATAGCGACGGCAATTACTGCCTCAGCTGTGGCAAGGATCGCACAATTCGCCTCTGGAATCCTCACCGTGGTATTCACATCAAGACCTACA
AATCACATGGCCGTGAAGTCCGCGACGTCCATGTCACCTCAGACAACTCTAAGTTATGTTCATGCGGCGGTGATCGCCAAGTCTTCTATTGGGATGTTTCTACTGGCCGC
GTTATTCGAAAATTTCGGGGCCATGATGGCGAGGTGAATGCTGTGAAATTTAATGAGTATGCTTCTGTCGTAGTCTCAGCAGGCTATGATCAATCATTGCGTGCTTGGGA
CTGCAGATCTCATAGCACTGAGCCAATTCAGATCATTGATACATTTTCAGACAGTGTAATGTCTGTTTGCTTAACAAAAAGTGAAATTATTGGAGGAAGTGTTGATGGTA
CTGTTCGAACATTTGACATGCGAATTGGCAGAGAAATATCAGATAACTTGGGGCAGCCTGTAAATTGTATCTCCATGTCCAACGATGCTAATTGCATATTAGCTAGTTGC
TTAGATTCAACTCTCCGTCTATTGGACAGGTCTTCTGGTGAGCTATTACAAGAATACAAGGGCCATACTTGTAAGTCTTACAAGCTGGATTGCTGCCTTACCAATACTGA
TGCACATGTAACTGGCGGATCTGAGGATGGATTCATTTATTTCTGGGATTTAGTAGATGCATCTATTGTCTCCAAGTTTCGAGCTCATTCCTCTGTTGGATGTGCTGACA
ATCTGTTGGGCACAACAAAATTGTCGTTGGGCCAAAATCACAAACACATTTTCTACTTGGTACCAAGATCTCCAATCAACCTGCCATCTATCTGCACATTCGAGAAGCTG
GATAAAATTTACTTGAAGGCACCAATACAAGCACCTGACAAGATTGAAATCACTCGGCAGAAGACTTGA
Protein sequenceShow/hide protein sequence
MSVAELPTKEGNVLKGHEGGVLAARFNSDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSHGREVRDVHVTSDNSKLCSCGGDRQVFYWDVSTGRVIRKFRGHDGEVNAVKF
NEYASVVVSAGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKSEIIGGSVDGTVRTFDMRIGREISDNLGQPVNCISMSNDANCILASCLDSTLRLLDRSSGELLQ
EYKGHTCKSYKLDCCLTNTDAHVTGGSEDGFIYFWDLVDASIVSKFRAHSSVGCADNLLGTTKLSLGQNHKHIFYLVPRSPINLPSICTFEKLDKIYLKAPIQAPDKIEI
TRQKT