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Lsi01G011270 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G011270
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionpollen-specific leucine-rich repeat extensin-like protein 1 isoform X1
Genome locationchr01:9393898..9394296
RNA-Seq ExpressionLsi01G011270
SyntenyLsi01G011270
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008441002.1 PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 1 isoform X1 [Cucumis melo]7.5e-3073.81Show/hide
Query:  QKEGNKESNEKEKTEDANPAEKQETTPPETEKQIINPPAEEKPSENKPPEAEAPVSDCVTENKTIISSEKLMETPNEPNKENDPKNGEPIEDKIKVEVTN
        QKEGN     KEKTE A+P EKQET PPETEKQ I+P  EEKPSEN PP  E  VSD VTEN T+ISSEKLMETPNE NKE DPKN    EDKIKVEVT 
Subjt:  QKEGNKESNEKEKTEDANPAEKQETTPPETEKQIINPPAEEKPSENKPPEAEAPVSDCVTENKTIISSEKLMETPNEPNKENDPKNGEPIEDKIKVEVTN

Query:  ENDLPSEKAESSDKPTETEKEVKVIS
        END+P EK ESS+KPTETEKEVKVI+
Subjt:  ENDLPSEKAESSDKPTETEKEVKVIS

XP_008441003.1 PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 1 isoform X2 [Cucumis melo]1.7e-2972.66Show/hide
Query:  IVQKEGNKESNEKEKTEDANPAEKQETTPPETEKQIINPPAEEKPSENKPPEAEAPVSDCVTENKTIISSEKLMETPNEPNKENDPKNGEPIEDKIKVEV
        IV  +  KE N KEKTE A+P EKQET PPETEKQ I+P  EEKPSEN PP  E  VSD VTEN T+ISSEKLMETPNE NKE DPKN    EDKIKVEV
Subjt:  IVQKEGNKESNEKEKTEDANPAEKQETTPPETEKQIINPPAEEKPSENKPPEAEAPVSDCVTENKTIISSEKLMETPNEPNKENDPKNGEPIEDKIKVEV

Query:  TNENDLPSEKAESSDKPTETEKEVKVIS
        T END+P EK ESS+KPTETEKEVKVI+
Subjt:  TNENDLPSEKAESSDKPTETEKEVKVIS

XP_038881338.1 early nodulin-75-like isoform X1 [Benincasa hispida]4.9e-3777.17Show/hide
Query:  QKEGNKESNEKEKTEDANPAEKQETTPPETEKQIINPPAEEKPSENKPPEAEAPVSDCVTENKTIISSEKLMETPNEPNKENDPKNGEPIEDKIKVEVTN
        QKEG KESNEKEKTED NP EKQ+TTPPET KQII PP EEKPSEN PPE E PVSD VTENK      K +E+PNE NKE+DPK  EPIEDKIK EVT 
Subjt:  QKEGNKESNEKEKTEDANPAEKQETTPPETEKQIINPPAEEKPSENKPPEAEAPVSDCVTENKTIISSEKLMETPNEPNKENDPKNGEPIEDKIKVEVTN

Query:  ENDLPSEKAESSDKPTETEKEVKVISN
        ENDLP EK ESS+KPTETEKEVKVISN
Subjt:  ENDLPSEKAESSDKPTETEKEVKVISN

XP_038881339.1 fibrous sheath CABYR-binding protein-like isoform X2 [Benincasa hispida]1.1e-3674.62Show/hide
Query:  LIVQKEGNKESNEKEKTEDANPAEKQETTPPETEKQIINPPAEEKPSENKPPEAEAPVSDCVTENKTIISSEKLMETPNEPNKENDPKNGEPIEDKIKVE
        L   +EG KESNEKEKTED NP EKQ+TTPPET KQII PP EEKPSEN PPE E PVSD VTENK      K +E+PNE NKE+DPK  EPIEDKIK E
Subjt:  LIVQKEGNKESNEKEKTEDANPAEKQETTPPETEKQIINPPAEEKPSENKPPEAEAPVSDCVTENKTIISSEKLMETPNEPNKENDPKNGEPIEDKIKVE

Query:  VTNENDLPSEKAESSDKPTETEKEVKVISN
        VT ENDLP EK ESS+KPTETEKEVKVISN
Subjt:  VTNENDLPSEKAESSDKPTETEKEVKVISN

XP_038881340.1 early nodulin-75-like isoform X3 [Benincasa hispida]1.4e-3676.38Show/hide
Query:  QKEGNKESNEKEKTEDANPAEKQETTPPETEKQIINPPAEEKPSENKPPEAEAPVSDCVTENKTIISSEKLMETPNEPNKENDPKNGEPIEDKIKVEVTN
        +KEG KESNEKEKTED NP EKQ+TTPPET KQII PP EEKPSEN PPE E PVSD VTENK      K +E+PNE NKE+DPK  EPIEDKIK EVT 
Subjt:  QKEGNKESNEKEKTEDANPAEKQETTPPETEKQIINPPAEEKPSENKPPEAEAPVSDCVTENKTIISSEKLMETPNEPNKENDPKNGEPIEDKIKVEVTN

Query:  ENDLPSEKAESSDKPTETEKEVKVISN
        ENDLP EK ESS+KPTETEKEVKVISN
Subjt:  ENDLPSEKAESSDKPTETEKEVKVISN

TrEMBL top hitse value%identityAlignment
A0A0A0KFS6 Uncharacterized protein1.7e-1960.94Show/hide
Query:  VLIVQKEGNKESNEKEKTEDANPAEKQETTPPETEKQIINPPAEEKPSENKPPEAEAPVSDCVTENKTIISSEKLMETPNEPNKENDPKNGEPIEDKIKV
        + I QKEGN     KEKTEDA+P EKQET PPETEKQ INP  EEKPSEN PP  E  VSD VTENKT+      METP+E                IKV
Subjt:  VLIVQKEGNKESNEKEKTEDANPAEKQETTPPETEKQIINPPAEEKPSENKPPEAEAPVSDCVTENKTIISSEKLMETPNEPNKENDPKNGEPIEDKIKV

Query:  EVTNENDLPSEKAESSDKPTETEKEVKV
        EVT END+P EK ES++KPTETEKEVKV
Subjt:  EVTNENDLPSEKAESSDKPTETEKEVKV

A0A1S3B2F3 pollen-specific leucine-rich repeat extensin-like protein 1 isoform X28.1e-3072.66Show/hide
Query:  IVQKEGNKESNEKEKTEDANPAEKQETTPPETEKQIINPPAEEKPSENKPPEAEAPVSDCVTENKTIISSEKLMETPNEPNKENDPKNGEPIEDKIKVEV
        IV  +  KE N KEKTE A+P EKQET PPETEKQ I+P  EEKPSEN PP  E  VSD VTEN T+ISSEKLMETPNE NKE DPKN    EDKIKVEV
Subjt:  IVQKEGNKESNEKEKTEDANPAEKQETTPPETEKQIINPPAEEKPSENKPPEAEAPVSDCVTENKTIISSEKLMETPNEPNKENDPKNGEPIEDKIKVEV

Query:  TNENDLPSEKAESSDKPTETEKEVKVIS
        T END+P EK ESS+KPTETEKEVKVI+
Subjt:  TNENDLPSEKAESSDKPTETEKEVKVIS

A0A1S3B2G7 pollen-specific leucine-rich repeat extensin-like protein 1 isoform X13.6e-3073.81Show/hide
Query:  QKEGNKESNEKEKTEDANPAEKQETTPPETEKQIINPPAEEKPSENKPPEAEAPVSDCVTENKTIISSEKLMETPNEPNKENDPKNGEPIEDKIKVEVTN
        QKEGN     KEKTE A+P EKQET PPETEKQ I+P  EEKPSEN PP  E  VSD VTEN T+ISSEKLMETPNE NKE DPKN    EDKIKVEVT 
Subjt:  QKEGNKESNEKEKTEDANPAEKQETTPPETEKQIINPPAEEKPSENKPPEAEAPVSDCVTENKTIISSEKLMETPNEPNKENDPKNGEPIEDKIKVEVTN

Query:  ENDLPSEKAESSDKPTETEKEVKVIS
        END+P EK ESS+KPTETEKEVKVI+
Subjt:  ENDLPSEKAESSDKPTETEKEVKVIS

A0A5A7SHD6 Pollen-specific leucine-rich repeat extensin-like protein 1 isoform X13.6e-3073.81Show/hide
Query:  QKEGNKESNEKEKTEDANPAEKQETTPPETEKQIINPPAEEKPSENKPPEAEAPVSDCVTENKTIISSEKLMETPNEPNKENDPKNGEPIEDKIKVEVTN
        QKEGN     KEKTE A+P EKQET PPETEKQ I+P  EEKPSEN PP  E  VSD VTEN T+ISSEKLMETPNE NKE DPKN    EDKIKVEVT 
Subjt:  QKEGNKESNEKEKTEDANPAEKQETTPPETEKQIINPPAEEKPSENKPPEAEAPVSDCVTENKTIISSEKLMETPNEPNKENDPKNGEPIEDKIKVEVTN

Query:  ENDLPSEKAESSDKPTETEKEVKVIS
        END+P EK ESS+KPTETEKEVKVI+
Subjt:  ENDLPSEKAESSDKPTETEKEVKVIS

A0A6J1GDB0 pollen-specific leucine-rich repeat extensin-like protein 14.2e-1051.67Show/hide
Query:  NEKEKTEDANPAEKQETTPPETEKQIINPPAEEKPSENKPPEAEAPVSDCVTENKTIISSEKLMETPNEPNKENDPKNGEPIEDKIKVEVTNENDLPSEK
        N++EKT  A+P+EK+E  PPE+EK+ +NPP EEKPSE  PPE E  ++   TE K    SE     P  P  ++  +N  PIE  IKVEV +EN  P EK
Subjt:  NEKEKTEDANPAEKQETTPPETEKQIINPPAEEKPSENKPPEAEAPVSDCVTENKTIISSEKLMETPNEPNKENDPKNGEPIEDKIKVEVTNENDLPSEK

Query:  AESSDKPTETEKEV-KVISN
         ES +KPTETE+ V KVISN
Subjt:  AESSDKPTETEKEV-KVISN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTTAATTGTACAGAAAGAAGGTAATAAGGAGTCCAATGAAAAGGAGAAGACAGAAGATGCAAATCCAGCGGAGAAGCAAGAGACCACCCCACCGGAAACTGAAAA
GCAAATAATAAACCCACCGGCGGAGGAGAAGCCGTCGGAAAACAAGCCACCGGAGGCGGAGGCACCAGTTTCCGACTGTGTTACAGAAAACAAAACAATTATCTCATCAG
AGAAATTAATGGAAACCCCAAATGAGCCAAACAAAGAAAATGACCCAAAAAATGGGGAACCAATTGAAGACAAAATCAAAGTGGAAGTTACCAATGAAAATGATCTTCCT
TCTGAGAAGGCAGAGTCATCGGACAAACCAACTGAAACAGAGAAAGAAGTGAAGGTAATTAGCAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTTTAATTGTACAGAAAGAAGGTAATAAGGAGTCCAATGAAAAGGAGAAGACAGAAGATGCAAATCCAGCGGAGAAGCAAGAGACCACCCCACCGGAAACTGAAAA
GCAAATAATAAACCCACCGGCGGAGGAGAAGCCGTCGGAAAACAAGCCACCGGAGGCGGAGGCACCAGTTTCCGACTGTGTTACAGAAAACAAAACAATTATCTCATCAG
AGAAATTAATGGAAACCCCAAATGAGCCAAACAAAGAAAATGACCCAAAAAATGGGGAACCAATTGAAGACAAAATCAAAGTGGAAGTTACCAATGAAAATGATCTTCCT
TCTGAGAAGGCAGAGTCATCGGACAAACCAACTGAAACAGAGAAAGAAGTGAAGGTAATTAGCAATTAA
Protein sequenceShow/hide protein sequence
MVLIVQKEGNKESNEKEKTEDANPAEKQETTPPETEKQIINPPAEEKPSENKPPEAEAPVSDCVTENKTIISSEKLMETPNEPNKENDPKNGEPIEDKIKVEVTNENDLP
SEKAESSDKPTETEKEVKVISN