CuGenDBv2

Gene ID	Lsi01G011570
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	NAD(P)H-quinone oxidoreductase subunit O, chloroplastic
Genome location	chr01:9731205..9738588
RNA-Seq Expression	Lsi01G011570
Synteny	Lsi01G011570
Gene Ontology terms	GO:0005886 - plasma membrane (cellular component) GO:0016655 - oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor (molecular function) GO:0048038 - quinone binding (molecular function)
InterPro domains	IPR020905 - NAD(P)H-quinone oxidoreductase subunit O

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004148658.1 NAD(P)H-quinone oxidoreductase subunit O, chloroplastic [Cucumis sativus]

2.4e-58

90.98

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Query:  MAFSASLSHNSFSCLTQFPHSFRRNPLRSHLIRAVKSTEPEKKVSETKTQEPPMPEPSSSSSPTASPKVPKKPVYSMKKGQIVRVDKEKYLNSVNYLSVG
        M FSAS SHNSFSCLTQFP +FRRNPLR HLIRAVKSTEPEKKVSETKTQE P+ EPSSSSSPTASPKV KKPVYSMKKGQIVRVDKEKYLNSVNYLSVG
Subjt:  MAFSASLSHNSFSCLTQFPHSFRRNPLRSHLIRAVKSTEPEKKVSETKTQEPPMPEPSSSSSPTASPKVPKKPVYSMKKGQIVRVDKEKYLNSVNYLSVG

Query:  HPPYYKGLDYIYEDRGEVLDLRIFETGEYALVS
        HPPY+KGLDYIYEDRGEVLDLRIFETGEYAL++
Subjt:  HPPYYKGLDYIYEDRGEVLDLRIFETGEYALVS

XP_008441053.1 PREDICTED: NAD(P)H-quinone oxidoreductase subunit O, chloroplastic [Cucumis melo]

2.6e-60

92.48

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Query:  MAFSASLSHNSFSCLTQFPHSFRRNPLRSHLIRAVKSTEPEKKVSETKTQEPPMPEPSSSSSPTASPKVPKKPVYSMKKGQIVRVDKEKYLNSVNYLSVG
        M FSASLSHNSFSCLTQFP +FRRNPLR HLIRAVKSTEPEKKV ETKTQEPP+ EPSSSSSPTASPKVPKKPVYSMKKGQIVRVDKEKYLNSVNYLSVG
Subjt:  MAFSASLSHNSFSCLTQFPHSFRRNPLRSHLIRAVKSTEPEKKVSETKTQEPPMPEPSSSSSPTASPKVPKKPVYSMKKGQIVRVDKEKYLNSVNYLSVG

Query:  HPPYYKGLDYIYEDRGEVLDLRIFETGEYALVS
        HPPY+KGLDYIYEDRGEVLDLRIFETGEYAL++
Subjt:  HPPYYKGLDYIYEDRGEVLDLRIFETGEYALVS

XP_022950243.1 NAD(P)H-quinone oxidoreductase subunit O, chloroplastic [Cucurbita moschata]

3.9e-56

87.22

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Query:  MAFSASLSHNSFSCLTQFPHSFRRNPLRSHLIRAVKSTEPEKKVSETKTQEPPMPEPSSSSSPTASPKVPKKPVYSMKKGQIVRVDKEKYLNSVNYLSVG
        MAFSASLSHNSFSCL+QFP SFRRNPLR + IRA+KST+PE K SETKTQ+PPM EPS+SSSP ASPKV KKPVYSMKKGQIVRVDKEKYLNSVNYLSVG
Subjt:  MAFSASLSHNSFSCLTQFPHSFRRNPLRSHLIRAVKSTEPEKKVSETKTQEPPMPEPSSSSSPTASPKVPKKPVYSMKKGQIVRVDKEKYLNSVNYLSVG

Query:  HPPYYKGLDYIYEDRGEVLDLRIFETGEYALVS
        HPPYYKGLDYIYEDRGEVLD+RIFETGEYAL++
Subjt:  HPPYYKGLDYIYEDRGEVLDLRIFETGEYALVS

XP_022977966.1 NAD(P)H-quinone oxidoreductase subunit O, chloroplastic isoform X1 [Cucurbita maxima]

1.3e-56

87.97

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Query:  MAFSASLSHNSFSCLTQFPHSFRRNPLRSHLIRAVKSTEPEKKVSETKTQEPPMPEPSSSSSPTASPKVPKKPVYSMKKGQIVRVDKEKYLNSVNYLSVG
        MAFSASLSHNSFSCLTQFP SFRRNPLR + IRA+KST+PE K SETKTQ+PPM EPS+SSSP ASPKV KKPVYSMKKGQIVRVDKEKYLNSVNYLSVG
Subjt:  MAFSASLSHNSFSCLTQFPHSFRRNPLRSHLIRAVKSTEPEKKVSETKTQEPPMPEPSSSSSPTASPKVPKKPVYSMKKGQIVRVDKEKYLNSVNYLSVG

Query:  HPPYYKGLDYIYEDRGEVLDLRIFETGEYALVS
        HPPYYKGLDYIYEDRGEVLD+RIFETGEYAL++
Subjt:  HPPYYKGLDYIYEDRGEVLDLRIFETGEYALVS

XP_038881195.1 NAD(P)H-quinone oxidoreductase subunit O, chloroplastic [Benincasa hispida]

2.7e-57

91.73

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Query:  MAFSASLSHNSFSCLTQFPHSFRRNPLRSHLIRAVKSTEPEKKVSETKTQEPPMPEPSSSSSPTASPKVPKKPVYSMKKGQIVRVDKEKYLNSVNYLSVG
        MAFSASLSHNSFSCLTQFP SFRRNPLR  LIRAVKSTEPE KVSETKTQEP   EPSSSSSPT +PKVPKKPVYSMKKGQIVRVDKEKYLNSVNYLSVG
Subjt:  MAFSASLSHNSFSCLTQFPHSFRRNPLRSHLIRAVKSTEPEKKVSETKTQEPPMPEPSSSSSPTASPKVPKKPVYSMKKGQIVRVDKEKYLNSVNYLSVG

Query:  HPPYYKGLDYIYEDRGEVLDLRIFETGEYALVS
        HPPYYKGLDYIYEDRGEVLDLRIFETGEYAL++
Subjt:  HPPYYKGLDYIYEDRGEVLDLRIFETGEYALVS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KHQ6 Uncharacterized protein

1.2e-58

90.98

Show/hide

Query:  MAFSASLSHNSFSCLTQFPHSFRRNPLRSHLIRAVKSTEPEKKVSETKTQEPPMPEPSSSSSPTASPKVPKKPVYSMKKGQIVRVDKEKYLNSVNYLSVG
        M FSAS SHNSFSCLTQFP +FRRNPLR HLIRAVKSTEPEKKVSETKTQE P+ EPSSSSSPTASPKV KKPVYSMKKGQIVRVDKEKYLNSVNYLSVG
Subjt:  MAFSASLSHNSFSCLTQFPHSFRRNPLRSHLIRAVKSTEPEKKVSETKTQEPPMPEPSSSSSPTASPKVPKKPVYSMKKGQIVRVDKEKYLNSVNYLSVG

Query:  HPPYYKGLDYIYEDRGEVLDLRIFETGEYALVS
        HPPY+KGLDYIYEDRGEVLDLRIFETGEYAL++
Subjt:  HPPYYKGLDYIYEDRGEVLDLRIFETGEYALVS

A0A1S3B2K7 NAD(P)H-quinone oxidoreductase subunit O, chloroplastic

1.2e-60

92.48

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Query:  MAFSASLSHNSFSCLTQFPHSFRRNPLRSHLIRAVKSTEPEKKVSETKTQEPPMPEPSSSSSPTASPKVPKKPVYSMKKGQIVRVDKEKYLNSVNYLSVG
        M FSASLSHNSFSCLTQFP +FRRNPLR HLIRAVKSTEPEKKV ETKTQEPP+ EPSSSSSPTASPKVPKKPVYSMKKGQIVRVDKEKYLNSVNYLSVG
Subjt:  MAFSASLSHNSFSCLTQFPHSFRRNPLRSHLIRAVKSTEPEKKVSETKTQEPPMPEPSSSSSPTASPKVPKKPVYSMKKGQIVRVDKEKYLNSVNYLSVG

Query:  HPPYYKGLDYIYEDRGEVLDLRIFETGEYALVS
        HPPY+KGLDYIYEDRGEVLDLRIFETGEYAL++
Subjt:  HPPYYKGLDYIYEDRGEVLDLRIFETGEYALVS

A0A6J1BWP0 NAD(P)H-quinone oxidoreductase subunit O, chloroplastic

6.9e-51

82.71

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Query:  MAFSASLSHNSFSCLTQFPHSFRRNPLRSHLIRAVKSTEPEKKVSETKTQEPPMPEPSSSSSPTASPKVPKKPVYSMKKGQIVRVDKEKYLNSVNYLSVG
        MAFSASLSH+SFSCLT F  +FRRNPL  H IRAVKSTEPE+K SE KTQ     EPSSSSS  ASPK PKKPVYSMKKGQIVRVDKEKYLNSVNYLSVG
Subjt:  MAFSASLSHNSFSCLTQFPHSFRRNPLRSHLIRAVKSTEPEKKVSETKTQEPPMPEPSSSSSPTASPKVPKKPVYSMKKGQIVRVDKEKYLNSVNYLSVG

Query:  HPPYYKGLDYIYEDRGEVLDLRIFETGEYALVS
        HPPY+KGLDYIYEDRGEVLD+RIFETGEYAL++
Subjt:  HPPYYKGLDYIYEDRGEVLDLRIFETGEYALVS

A0A6J1GED5 NAD(P)H-quinone oxidoreductase subunit O, chloroplastic

1.9e-56

87.22

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Query:  MAFSASLSHNSFSCLTQFPHSFRRNPLRSHLIRAVKSTEPEKKVSETKTQEPPMPEPSSSSSPTASPKVPKKPVYSMKKGQIVRVDKEKYLNSVNYLSVG
        MAFSASLSHNSFSCL+QFP SFRRNPLR + IRA+KST+PE K SETKTQ+PPM EPS+SSSP ASPKV KKPVYSMKKGQIVRVDKEKYLNSVNYLSVG
Subjt:  MAFSASLSHNSFSCLTQFPHSFRRNPLRSHLIRAVKSTEPEKKVSETKTQEPPMPEPSSSSSPTASPKVPKKPVYSMKKGQIVRVDKEKYLNSVNYLSVG

Query:  HPPYYKGLDYIYEDRGEVLDLRIFETGEYALVS
        HPPYYKGLDYIYEDRGEVLD+RIFETGEYAL++
Subjt:  HPPYYKGLDYIYEDRGEVLDLRIFETGEYALVS

A0A6J1ILG8 NAD(P)H-quinone oxidoreductase subunit O, chloroplastic isoform X1

6.4e-57

87.97

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Query:  MAFSASLSHNSFSCLTQFPHSFRRNPLRSHLIRAVKSTEPEKKVSETKTQEPPMPEPSSSSSPTASPKVPKKPVYSMKKGQIVRVDKEKYLNSVNYLSVG
        MAFSASLSHNSFSCLTQFP SFRRNPLR + IRA+KST+PE K SETKTQ+PPM EPS+SSSP ASPKV KKPVYSMKKGQIVRVDKEKYLNSVNYLSVG
Subjt:  MAFSASLSHNSFSCLTQFPHSFRRNPLRSHLIRAVKSTEPEKKVSETKTQEPPMPEPSSSSSPTASPKVPKKPVYSMKKGQIVRVDKEKYLNSVNYLSVG

Query:  HPPYYKGLDYIYEDRGEVLDLRIFETGEYALVS
        HPPYYKGLDYIYEDRGEVLD+RIFETGEYAL++
Subjt:  HPPYYKGLDYIYEDRGEVLDLRIFETGEYALVS

SwissProt top hits

e value

%identity

Alignment

Q9S829 NAD(P)H-quinone oxidoreductase subunit O, chloroplastic

3.4e-31

60.45

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Query:  MAFSASLSH-NSFSCL-TQFPHSFRRNPLRSHLIRAVKSTEPEKKVSETKTQEPPMPEPSSSSSPTASPKVPKKPVYSMKKGQIVRVDKEKYLNSVNYLS
        MAFSA++S  +S S + +  P S RR P RS L +     E EK+   T+ +      P+++ +P     +PKKPVYSMKKGQIVRV+KEKYLNS+NYLS
Subjt:  MAFSASLSH-NSFSCL-TQFPHSFRRNPLRSHLIRAVKSTEPEKKVSETKTQEPPMPEPSSSSSPTASPKVPKKPVYSMKKGQIVRVDKEKYLNSVNYLS

Query:  VGHPPYYKGLDYIYEDRGEVLDLRIFETGEYALV
        VGHPP+YKGLDYIYEDRGEVLDLR+FETGEYALV
Subjt:  VGHPPYYKGLDYIYEDRGEVLDLRIFETGEYALV

Arabidopsis top hits

e value

%identity

Alignment

AT1G74880.1 NAD(P)H:plastoquinone dehydrogenase complex subunit O

2.4e-32

60.45

Show/hide

Query:  MAFSASLSH-NSFSCL-TQFPHSFRRNPLRSHLIRAVKSTEPEKKVSETKTQEPPMPEPSSSSSPTASPKVPKKPVYSMKKGQIVRVDKEKYLNSVNYLS
        MAFSA++S  +S S + +  P S RR P RS L +     E EK+   T+ +      P+++ +P     +PKKPVYSMKKGQIVRV+KEKYLNS+NYLS
Subjt:  MAFSASLSH-NSFSCL-TQFPHSFRRNPLRSHLIRAVKSTEPEKKVSETKTQEPPMPEPSSSSSPTASPKVPKKPVYSMKKGQIVRVDKEKYLNSVNYLS

Query:  VGHPPYYKGLDYIYEDRGEVLDLRIFETGEYALV
        VGHPP+YKGLDYIYEDRGEVLDLR+FETGEYALV
Subjt:  VGHPPYYKGLDYIYEDRGEVLDLRIFETGEYALV

Sequences

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CDS sequence

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ATGGCTTTTTCTGCATCTCTTTCTCACAACTCTTTCTCATGCCTCACTCAGTTCCCACATAGTTTTAGAAGAAACCCACTTCGTTCTCACCTCATTCGAGCTGTAAAATC
CACTGAACCGGAGAAGAAGGTCTCGGAGACCAAAACCCAGGAGCCTCCCATGCCTGAACCTTCAAGTTCAAGCTCCCCCACCGCCTCTCCTAAGGTTCCAAAGAAGCCCG
TCTATTCGATGAAGAAGGGTCAGATTGTGAGAGTTGATAAAGAGAAGTATCTTAATAGTGTTAATTATCTATCTGTTGGACATCCACCTTATTACAAGGGCTTGGATTAC
ATTTATGAAGACCGTGGTGAGGTATTGGATCTTCGCATTTTCGAGACAGGAGAATATGCACTTGTGAGTAACTTTCATTTGGATTCCATGTATATATGA

mRNA sequence

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TCCTTTCCATGTTCAAAGGTCGGATTTTTCATTGCATATACATTTTTATTTTTCACAAAGCAATCCCTCTCAAAGATTTATGCAGCAGCTTTTTTGTATTGTCGATATGT
GGTTTATCATTTTAGCGTTATCTCTGTTCGACTGCTCATTGAGTGAGTGAGGGACATTTCTGTAGCTCACAGGCTAAATCTCTACCTCTCTCTGTCCTTTTTCCGCCATG
GCTTTTTCTGCATCTCTTTCTCACAACTCTTTCTCATGCCTCACTCAGTTCCCACATAGTTTTAGAAGAAACCCACTTCGTTCTCACCTCATTCGAGCTGTAAAATCCAC
TGAACCGGAGAAGAAGGTCTCGGAGACCAAAACCCAGGAGCCTCCCATGCCTGAACCTTCAAGTTCAAGCTCCCCCACCGCCTCTCCTAAGGTTCCAAAGAAGCCCGTCT
ATTCGATGAAGAAGGGTCAGATTGTGAGAGTTGATAAAGAGAAGTATCTTAATAGTGTTAATTATCTATCTGTTGGACATCCACCTTATTACAAGGGCTTGGATTACATT
TATGAAGACCGTGGTGAGGTATTGGATCTTCGCATTTTCGAGACAGGAGAATATGCACTTGTGAGTAACTTTCATTTGGATTCCATGTATATATGATGCTTTGGCTTTTC
TTTTTATTTTCTATAGGATCTGCTGGACATCCACCTTATCACAAGTTTCATTAACTACTATAATTTATCAAAATAGTGAGAGAAAAAGGAAACTTAGCTCAAGCAAAATG
GATATTTGCTTTGGTTGCAAATGCATTGTTGTGTTACATTTTCACTCAAAATTCTTGGACAGATTGCATGGGTTGGTATTCCAACTGCACCAGCTTGGCTGCCGACAGAC
ATGCTTATAAAGTCGGAGAAACTCAACTACGAAAGACTCTAATCACAGCTTTGAATCAACGATGCTCACTTGACGGTTTATAGTTTACACTTTTCCCCATGTCTCTGTAA
AGAGGTGTAGTTATTTCTTTACTCCATTAATAATTCATCACAAATCTTCTGCAACCTTGATGGTTCTTCTGTTAATATTTAACATTAAATTATGTATTAGAACAAAAAGA
AGAAAAATGTTTTTATGAAGAATGATAATGTAAGTAATAAGGGATGGAAGTAACCTTCTGAGAATCTTAGTTTTGAATGGCTGATCTAATGATAGCAGTAATAAACTAAA
ACTGATTATTTCATATACAGACCACCTTCCCTTTACAAGGATCAAAAAAATAGTTGTTACGAGGTACAAGATATCTCTAAGTAATTACATCATATCCCCAGTTAGAAAAT
TTTATCCCACCACTATCAATCAAGTATCCTTCTTTCAAATGCTGATACATGAATAAATCAATCTCTCTTCACAATAAACTTTCCAGAATTTCCATTAGAAAGCCCCAATG
CTTACATACTTCTGATACAGTGGGTAAAATTACACCTGGGGATGTGAAGAAGATATTTTTCTTCTTTTTTCATGAGAAGTTTAGTCAAAGAGGTC

Protein sequence

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MAFSASLSHNSFSCLTQFPHSFRRNPLRSHLIRAVKSTEPEKKVSETKTQEPPMPEPSSSSSPTASPKVPKKPVYSMKKGQIVRVDKEKYLNSVNYLSVGHPPYYKGLDY
IYEDRGEVLDLRIFETGEYALVSNFHLDSMYI

Lsi01G011570 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome