; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi01G011990 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G011990
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionSecoisolariciresinol dehydrogenase
Genome locationchr01:10238456..10238662
RNA-Seq ExpressionLsi01G011990
SyntenyLsi01G011990
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7027179.1 hypothetical protein SDJN02_11190, partial [Cucurbita argyrosperma subsp. argyrosperma]5.1e-1492.86Show/hide
Query:  VAKTGSFVLCGVAACPPFPRINAEKCPAPAHTGPGLEAMTPV
        VA+TGSFVLCG AACPPFPRI AEKCPAPAHTGPGLEAMTPV
Subjt:  VAKTGSFVLCGVAACPPFPRINAEKCPAPAHTGPGLEAMTPV
PSS15891.1 Secoisolariciresinol dehydrogenase [Actinidia chinensis var. chinensis]7.4e-0550.75Show/hide
Query:  KAVAKTGSFVLCGVAACPPFPRINAEKCPAPAHTGPGLEAMTPVGKEGCTCNAKIPSMSSRASSCSI
        K   +  S V C +A CPPFPRI A   P PA  G GLE M PVGK G  CN K+    SRA S +I
Subjt:  KAVAKTGSFVLCGVAACPPFPRINAEKCPAPAHTGPGLEAMTPVGKEGCTCNAKIPSMSSRASSCSI
TrEMBL top hitse value%identityAlignment
A0A0A9CCE1 Uncharacterized protein3.0e-0445.9Show/hide
Query:  AKTGSFVLCGVAACPPFPRINAEKCPAPAHTGPGLEAMTPVGKEGCTCNAKIPSMSSRASS
        A  G   L G+AACPPFP   A+   A A  GPGL+   P G+ G TC   +    SRASS
Subjt:  AKTGSFVLCGVAACPPFPRINAEKCPAPAHTGPGLEAMTPVGKEGCTCNAKIPSMSSRASS
A0A2R6QVW5 Secoisolariciresinol dehydrogenase3.6e-0550.75Show/hide
Query:  KAVAKTGSFVLCGVAACPPFPRINAEKCPAPAHTGPGLEAMTPVGKEGCTCNAKIPSMSSRASSCSI
        K   +  S V C +A CPPFPRI A   P PA  G GLE M PVGK G  CN K+    SRA S +I
Subjt:  KAVAKTGSFVLCGVAACPPFPRINAEKCPAPAHTGPGLEAMTPVGKEGCTCNAKIPSMSSRASSCSI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGCTGTTGCCAAAACTGGGTCCTTCGTCTTATGTGGGGTTGCTGCATGTCCACCCTTTCCCCGGATCAATGCTGAAAAGTGTCCTGCTCCAGCGCATACTGGACC
CGGCCTAGAGGCTATGACACCAGTTGGTAAGGAGGGCTGTACGTGCAATGCAAAGATTCCATCAATGTCATCAAGGGCATCTTCTTGTAGCATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAAGCTGTTGCCAAAACTGGGTCCTTCGTCTTATGTGGGGTTGCTGCATGTCCACCCTTTCCCCGGATCAATGCTGAAAAGTGTCCTGCTCCAGCGCATACTGGACC
CGGCCTAGAGGCTATGACACCAGTTGGTAAGGAGGGCTGTACGTGCAATGCAAAGATTCCATCAATGTCATCAAGGGCATCTTCTTGTAGCATTTGA
Protein sequenceShow/hide protein sequence
MKAVAKTGSFVLCGVAACPPFPRINAEKCPAPAHTGPGLEAMTPVGKEGCTCNAKIPSMSSRASSCSI