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Lsi01G012140 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G012140
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionauxin-responsive protein SAUR50-like
Genome locationchr01:10371832..10372236
RNA-Seq ExpressionLsi01G012140
SyntenyLsi01G012140
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025249.1 auxin-induced protein X15 [Cucumis melo var. makuwa]2.9e-6192.59Show/hide
Query:  MLGKKMVSFKKLAKKVK-VRVGTESEASHNECLLTDRYELTEDHDYQSPSSPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRN
        ML KKMVSFKKLAKKVK VRVGT+SE SHNECLLTDR ELTED D  SPSSPTSTPTG FAIYVGDERQRFVVPTSFLSHPLFRM+LDKAYREFGFEQRN
Subjt:  MLGKKMVSFKKLAKKVK-VRVGTESEASHNECLLTDRYELTEDHDYQSPSSPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRN

Query:  ALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL
        ALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL
Subjt:  ALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL

XP_008462582.1 PREDICTED: auxin-induced protein X15 [Cucumis melo]7.6e-6292.59Show/hide
Query:  MLGKKMVSFKKLAKKVK-VRVGTESEASHNECLLTDRYELTEDHDYQSPSSPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRN
        ML KKMVSFKKLAKKVK VRVGT+SE SHNECLLTDR ELTEDHD  SPSSPTSTPTG FAIYVGDERQRFVVPTSFLSHPLFRM+LDKAYREFGFEQRN
Subjt:  MLGKKMVSFKKLAKKVK-VRVGTESEASHNECLLTDRYELTEDHDYQSPSSPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRN

Query:  ALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL
        ALVVPCSVSAF+EIVSAVECCNGRFDFGEIVEEFL
Subjt:  ALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL

XP_022962864.1 auxin-induced protein 6B-like [Cucurbita moschata]2.4e-6091.18Show/hide
Query:  MLGKKMVSFKKLAKKVKVRVGTESE-ASHNECLLTDRYELTEDHDYQSPS-SPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQR
        MLGKKMVSFKKLAKKVKVRVGTE E +SHNECLL DR E ++DHD  SPS SPTSTPTGSFA+YVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQR
Subjt:  MLGKKMVSFKKLAKKVKVRVGTESE-ASHNECLLTDRYELTEDHDYQSPS-SPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQR

Query:  NALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL
        NALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL
Subjt:  NALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL

XP_031742714.1 auxin-induced protein 6B [Cucumis sativus]1.7e-6191.85Show/hide
Query:  MLGKKMVSFKKLAKKVK-VRVGTESEASHNECLLTDRYELTEDHDYQSPSSPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRN
        ML KKMVSFKKLAKKVK VRVGTE+E SHNECLLTDR+EL  DHD  SPSSPTSTPTGSFAIYVG+ERQRFVVPTSFLSHPLFRM+LDKAYREFGFEQRN
Subjt:  MLGKKMVSFKKLAKKVK-VRVGTESEASHNECLLTDRYELTEDHDYQSPSSPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRN

Query:  ALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL
        ALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL
Subjt:  ALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL

XP_038883394.1 auxin-responsive protein SAUR50 [Benincasa hispida]5.1e-6697.01Show/hide
Query:  MLGKKMVSFKKLAKKVKVRVGTESEASHNECLLTDRYELTEDHDYQSPSSPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNA
        MLGKKMVSFKKLAKKVKVRVGTE+EASHNECLLTDR ELTEDHD  SPSSPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNA
Subjt:  MLGKKMVSFKKLAKKVKVRVGTESEASHNECLLTDRYELTEDHDYQSPSSPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNA

Query:  LVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL
        LVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL
Subjt:  LVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL

TrEMBL top hitse value%identityAlignment
A0A0A0KEY4 Uncharacterized protein8.2e-6291.85Show/hide
Query:  MLGKKMVSFKKLAKKVK-VRVGTESEASHNECLLTDRYELTEDHDYQSPSSPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRN
        ML KKMVSFKKLAKKVK VRVGTE+E SHNECLLTDR+EL  DHD  SPSSPTSTPTGSFAIYVG+ERQRFVVPTSFLSHPLFRM+LDKAYREFGFEQRN
Subjt:  MLGKKMVSFKKLAKKVK-VRVGTESEASHNECLLTDRYELTEDHDYQSPSSPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRN

Query:  ALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL
        ALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL
Subjt:  ALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL

A0A1S3CHA6 auxin-induced protein X153.7e-6292.59Show/hide
Query:  MLGKKMVSFKKLAKKVK-VRVGTESEASHNECLLTDRYELTEDHDYQSPSSPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRN
        ML KKMVSFKKLAKKVK VRVGT+SE SHNECLLTDR ELTEDHD  SPSSPTSTPTG FAIYVGDERQRFVVPTSFLSHPLFRM+LDKAYREFGFEQRN
Subjt:  MLGKKMVSFKKLAKKVK-VRVGTESEASHNECLLTDRYELTEDHDYQSPSSPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRN

Query:  ALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL
        ALVVPCSVSAF+EIVSAVECCNGRFDFGEIVEEFL
Subjt:  ALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL

A0A5A7SIW6 Auxin-induced protein X151.4e-6192.59Show/hide
Query:  MLGKKMVSFKKLAKKVK-VRVGTESEASHNECLLTDRYELTEDHDYQSPSSPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRN
        ML KKMVSFKKLAKKVK VRVGT+SE SHNECLLTDR ELTED D  SPSSPTSTPTG FAIYVGDERQRFVVPTSFLSHPLFRM+LDKAYREFGFEQRN
Subjt:  MLGKKMVSFKKLAKKVK-VRVGTESEASHNECLLTDRYELTEDHDYQSPSSPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRN

Query:  ALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL
        ALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL
Subjt:  ALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL

A0A6J1HIA1 auxin-induced protein 6B-like1.2e-6091.18Show/hide
Query:  MLGKKMVSFKKLAKKVKVRVGTESE-ASHNECLLTDRYELTEDHDYQSPS-SPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQR
        MLGKKMVSFKKLAKKVKVRVGTE E +SHNECLL DR E ++DHD  SPS SPTSTPTGSFA+YVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQR
Subjt:  MLGKKMVSFKKLAKKVKVRVGTESE-ASHNECLLTDRYELTEDHDYQSPS-SPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQR

Query:  NALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL
        NALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL
Subjt:  NALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL

A0A6J1IC38 auxin-responsive protein SAUR50-like2.6e-6091.04Show/hide
Query:  MLGKKMVSFKKLAKKVKVRVGTESEASHNECLLTDRYELTEDHDYQSPSSPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNA
        MLGKKMVSFKKLAKKVKVRVGTE E+SHNE LL DR E ++DHD  SP SPTSTPTGSFA+YVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNA
Subjt:  MLGKKMVSFKKLAKKVKVRVGTESEASHNECLLTDRYELTEDHDYQSPSSPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNA

Query:  LVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL
        LVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL
Subjt:  LVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL

SwissProt top hitse value%identityAlignment
O64538 Auxin-responsive protein SAUR402.0e-0936.36Show/hide
Query:  TSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIVSAV
        +S P+G   + VG++++RFVV    L+HP+F  LL+++ +E+G+ Q+  L +PC+V  F+++V ++
Subjt:  TSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIVSAV

O65695 Auxin-responsive protein SAUR502.0e-1242.47Show/hide
Query:  YQSPSSPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIVSAV
        Y     P   P G F +YVG+ R R++VP SFL+HP F+ LL +A  EFGF+    L +PC    FQ + S +
Subjt:  YQSPSSPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIVSAV

P0DKL1 Auxin-responsive protein SAUR501.6e-0938.81Show/hide
Query:  PTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIVSAV
        P   P G F +YVG+ R R++VP S L HP F+ LL ++  EFGF     +++PC    F    S +
Subjt:  PTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIVSAV

P32295 Indole-3-acetic acid-induced protein ARG71.6e-0941.1Show/hide
Query:  QSPSSPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQ-RNALVVPCSVSAFQEIVSAV
        ++ S     P G  A+YVG+  +RFV+P S L+ PLF+ LL +A  EFG++     L +PCS   FQ I S +
Subjt:  QSPSSPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQ-RNALVVPCSVSAFQEIVSAV

Q9LTV3 Auxin-responsive protein SAUR723.7e-1140.28Show/hide
Query:  QSPSSPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIVSAV
        +S    +S P G   +YVGDE +RFVV    L+HP+F  LL+++ +E+G+EQ+  L +PC V  F+ I+ ++
Subjt:  QSPSSPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIVSAV

Arabidopsis top hitse value%identityAlignment
AT1G19830.1 SAUR-like auxin-responsive protein family4.8e-1438.75Show/hide
Query:  ELTEDHDYQSPSSPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIVSAV
        E  + H++   S P   P G F +YVG  R R+V+P SFL+ P F++LL +A  EFGF+    L +PC   AF+ +++++
Subjt:  ELTEDHDYQSPSSPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIVSAV

AT2G36210.1 SAUR-like auxin-responsive protein family1.9e-3455.63Show/hide
Query:  MLGKKMVSFKKLAKKVK-----VRVGTE--SEASHNECLLTDRYELTEDHDYQSPSSPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREF
        MLGK++ SFK LAKK+K      R G E  SE+++NE LL +  +       ++    + TPTG+FA+YVG+ER + VVPTS+L+HPLFRMLLDK++ EF
Subjt:  MLGKKMVSFKKLAKKVK-----VRVGTE--SEASHNECLLTDRYELTEDHDYQSPSSPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREF

Query:  -GFEQRNALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL
          FEQ+  LVVPCS+S FQ++V+AVE CNG FDFGE VEEFL
Subjt:  -GFEQRNALVVPCSVSAFQEIVSAVECCNGRFDFGEIVEEFL

AT3G43120.1 SAUR-like auxin-responsive protein family3.5e-1746.15Show/hide
Query:  EDHDYQSPSSPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIVSAVE
        E+   QSP  P   P G  A+YVG E +RF++PT+FLSH LF++LL+KA  E+GF+   AL +PC V  F+ ++  +E
Subjt:  EDHDYQSPSSPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIVSAVE

AT5G20810.1 SAUR-like auxin-responsive protein family2.5e-1844.44Show/hide
Query:  NECLLTDRYELTEDHDYQSPSSPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIVSAVE
        N+ LL  +   +++   QSP  P   P G+ A+YVG E +RF++PTS+LSH LF++LL+KA  EFGF+Q  AL +PC V  F+ ++  +E
Subjt:  NECLLTDRYELTEDHDYQSPSSPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIVSAVE

AT5G20810.2 SAUR-like auxin-responsive protein family2.5e-1844.44Show/hide
Query:  NECLLTDRYELTEDHDYQSPSSPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIVSAVE
        N+ LL  +   +++   QSP  P   P G+ A+YVG E +RF++PTS+LSH LF++LL+KA  EFGF+Q  AL +PC V  F+ ++  +E
Subjt:  NECLLTDRYELTEDHDYQSPSSPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIVSAVE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTAGGCAAGAAAATGGTCTCCTTCAAGAAACTCGCCAAGAAAGTGAAGGTCCGAGTCGGAACCGAGAGCGAAGCATCGCACAACGAGTGTTTGCTCACAGATCGGTA
TGAATTAACGGAGGATCACGATTATCAGTCGCCGTCGTCTCCGACCTCGACACCAACCGGCTCGTTCGCGATTTACGTCGGCGACGAACGGCAGCGTTTCGTCGTGCCGA
CGAGCTTCTTATCGCATCCGCTCTTCAGGATGCTGCTGGATAAAGCGTACAGAGAGTTCGGATTCGAGCAGAGGAATGCGCTTGTTGTTCCTTGTAGCGTCTCTGCTTTT
CAAGAAATTGTGAGCGCTGTCGAATGTTGTAATGGCAGATTCGATTTCGGCGAGATTGTCGAGGAGTTTCTATAG
mRNA sequenceShow/hide mRNA sequence
ATGCTAGGCAAGAAAATGGTCTCCTTCAAGAAACTCGCCAAGAAAGTGAAGGTCCGAGTCGGAACCGAGAGCGAAGCATCGCACAACGAGTGTTTGCTCACAGATCGGTA
TGAATTAACGGAGGATCACGATTATCAGTCGCCGTCGTCTCCGACCTCGACACCAACCGGCTCGTTCGCGATTTACGTCGGCGACGAACGGCAGCGTTTCGTCGTGCCGA
CGAGCTTCTTATCGCATCCGCTCTTCAGGATGCTGCTGGATAAAGCGTACAGAGAGTTCGGATTCGAGCAGAGGAATGCGCTTGTTGTTCCTTGTAGCGTCTCTGCTTTT
CAAGAAATTGTGAGCGCTGTCGAATGTTGTAATGGCAGATTCGATTTCGGCGAGATTGTCGAGGAGTTTCTATAG
Protein sequenceShow/hide protein sequence
MLGKKMVSFKKLAKKVKVRVGTESEASHNECLLTDRYELTEDHDYQSPSSPTSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAF
QEIVSAVECCNGRFDFGEIVEEFL