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Lsi01G012200 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G012200
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr01:10418105..10418602
RNA-Seq ExpressionLsi01G012200
SyntenyLsi01G012200
Gene Ontology termsNA
InterPro domainsIPR025322 - Protein of unknown function DUF4228, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7034500.1 hypothetical protein SDJN02_04230, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-6679.43Show/hide
Query:  MGNCNCLFVDQKPIRIMKTDGKILEYKSPTRVFQVLSDFSGHQISDAVPVTHHLHRTAKLLSGHLYFLIPTEAEEKKPKKAVRFAEPEKEIGGG------
        MGN NCLFVDQKPIRIMKTDGKILEYKSPTRVFQVLSDFSGHQISDAVPV+ HLH TAKLL+GHLYFLIP EA EKKPKK VRFA+ EKE  GG      
Subjt:  MGNCNCLFVDQKPIRIMKTDGKILEYKSPTRVFQVLSDFSGHQISDAVPVTHHLHRTAKLLSGHLYFLIPTEAEEKKPKKAVRFAEPEKEIGGG------

Query:  ------VVRIKVVMTKKELQEMVERGGITAEEMICKIKSGSGEINCRELEGEDEESELQRWKPVLESIPESEVAC
              VVRIK+VMTKKELQEMVERGGI+ +EMICKIKSGSGEI+C ELE EDEE   QRWKP L+SIPESEVAC
Subjt:  ------VVRIKVVMTKKELQEMVERGGITAEEMICKIKSGSGEINCRELEGEDEESELQRWKPVLESIPESEVAC

XP_004143322.2 uncharacterized protein LOC101213283 [Cucumis sativus]6.2e-7486.63Show/hide
Query:  MGNCNCLFVDQKPIRIMKTDGKILEYKSPTRVFQVLSDFSGHQISDAVPVTHHLHRTAKLLSGHLYFLIPTEAEEKKPKKAVRFAEPEKE--IGGGVVRI
        MGNCNCLF+D KPIRIMKTDGKILEYKSPTRVFQVLSDFSGH+ISDAVPV+HHLHRTAKLLSGHLYFLIP E EEKKPKKAVRFAEPEKE   GGGVVRI
Subjt:  MGNCNCLFVDQKPIRIMKTDGKILEYKSPTRVFQVLSDFSGHQISDAVPVTHHLHRTAKLLSGHLYFLIPTEAEEKKPKKAVRFAEPEKE--IGGGVVRI

Query:  KVVMTKKELQEMVERGGITAEEMICKIKSGSGEINCR-ELEGE------DEESELQRWKPVLESIPESEVAC
        KVVMTKKELQEMVERGGI+AEEMICKIK+G GEI+ R E+E E      DEESELQRWKPVLESIPESEVAC
Subjt:  KVVMTKKELQEMVERGGITAEEMICKIKSGSGEINCR-ELEGE------DEESELQRWKPVLESIPESEVAC

XP_008462573.1 PREDICTED: uncharacterized protein LOC103500900 [Cucumis melo]2.1e-7486.21Show/hide
Query:  MGNCNCLFVDQKPIRIMKTDGKILEYKSPTRVFQVLSDFSGHQISDAVPVTHHLHRTAKLLSGHLYFLIPTEAEEKKPKKAVRFAEPEKE-----IGGGV
        MGNCNCLFVD KPIRIMKTDGKILEYKSPTRVFQVLSDFSGH+ISDAVPVTHHLHRTAKLLSGHLYFLIP E  EKKPKKAVRFAEPEKE      GGGV
Subjt:  MGNCNCLFVDQKPIRIMKTDGKILEYKSPTRVFQVLSDFSGHQISDAVPVTHHLHRTAKLLSGHLYFLIPTEAEEKKPKKAVRFAEPEKE-----IGGGV

Query:  VRIKVVMTKKELQEMVERGGITAEEMICKIKSGSGEINCR------ELEGEDEESELQRWKPVLESIPESEVAC
        VRIKVVMTKKELQEMVERGGI+AEEMICKIK+G GEI+ R      E E EDEESELQRWKPVLESIPESEVAC
Subjt:  VRIKVVMTKKELQEMVERGGITAEEMICKIKSGSGEINCR------ELEGEDEESELQRWKPVLESIPESEVAC

XP_022977419.1 uncharacterized protein LOC111477765 [Cucurbita maxima]4.3e-6781.18Show/hide
Query:  MGNCNCLFVDQKPIRIMKTDGKILEYKSPTRVFQVLSDFSGHQISDAVPVTHHLHRTAKLLSGHLYFLIPTEAEEKKPKKAVRFAEPEK----EIGGG--
        MGN NCLFVDQKPIRIMKTDGKILEYKSPTRVFQVLSDFSGHQISDAVPV+ HLH TAKLL+GHLYFLIPTEA EKKPKK VRFA+ EK    E GGG  
Subjt:  MGNCNCLFVDQKPIRIMKTDGKILEYKSPTRVFQVLSDFSGHQISDAVPVTHHLHRTAKLLSGHLYFLIPTEAEEKKPKKAVRFAEPEK----EIGGG--

Query:  -VVRIKVVMTKKELQEMVERGGITAEEMICKIKSGSGEINCRELEGEDEESELQRWKPVLESIPESEVAC
         VVRIK+VMTKKELQEMVERGGI+ +EM+CKIKSGSGEI+C EL    EE+E QRWKP L+SIPESEVAC
Subjt:  -VVRIKVVMTKKELQEMVERGGITAEEMICKIKSGSGEINCRELEGEDEESELQRWKPVLESIPESEVAC

XP_038882971.1 uncharacterized protein LOC120074056 [Benincasa hispida]1.2e-7790.18Show/hide
Query:  MGNCNCLFVDQKPIRIMKTDGKILEYKSPTRVFQVLSDFSGHQISDAVPVTHHLHRTAKLLSGHLYFLIPTEAEEKKPKKAVRFAEPEKEIGGGVVRIKV
        MGNCNCLF+D+KPIRIMK DGKILEYKSPTRVFQVLSDFSGH+ISDAVPVTHHLHRTAKLLSGHLYFLIP + EEKK KKAVRFAEPEKE GGGVVRIKV
Subjt:  MGNCNCLFVDQKPIRIMKTDGKILEYKSPTRVFQVLSDFSGHQISDAVPVTHHLHRTAKLLSGHLYFLIPTEAEEKKPKKAVRFAEPEKEIGGGVVRIKV

Query:  VMTKKELQEMVERGGITAEEMICKIKSGSGEINCRELEGEDEESELQRWKPVLESIPESEVAC
        VMTKKEL+EMVERGGI+AEEMI KIKSGSGEI+CR+LE EDEESELQRWKPVL+SIPESEVAC
Subjt:  VMTKKELQEMVERGGITAEEMICKIKSGSGEINCRELEGEDEESELQRWKPVLESIPESEVAC

TrEMBL top hitse value%identityAlignment
A0A0A0KHH5 Uncharacterized protein3.0e-7486.63Show/hide
Query:  MGNCNCLFVDQKPIRIMKTDGKILEYKSPTRVFQVLSDFSGHQISDAVPVTHHLHRTAKLLSGHLYFLIPTEAEEKKPKKAVRFAEPEKE--IGGGVVRI
        MGNCNCLF+D KPIRIMKTDGKILEYKSPTRVFQVLSDFSGH+ISDAVPV+HHLHRTAKLLSGHLYFLIP E EEKKPKKAVRFAEPEKE   GGGVVRI
Subjt:  MGNCNCLFVDQKPIRIMKTDGKILEYKSPTRVFQVLSDFSGHQISDAVPVTHHLHRTAKLLSGHLYFLIPTEAEEKKPKKAVRFAEPEKE--IGGGVVRI

Query:  KVVMTKKELQEMVERGGITAEEMICKIKSGSGEINCR-ELEGE------DEESELQRWKPVLESIPESEVAC
        KVVMTKKELQEMVERGGI+AEEMICKIK+G GEI+ R E+E E      DEESELQRWKPVLESIPESEVAC
Subjt:  KVVMTKKELQEMVERGGITAEEMICKIKSGSGEINCR-ELEGE------DEESELQRWKPVLESIPESEVAC

A0A1S3CHA7 uncharacterized protein LOC1035009001.0e-7486.21Show/hide
Query:  MGNCNCLFVDQKPIRIMKTDGKILEYKSPTRVFQVLSDFSGHQISDAVPVTHHLHRTAKLLSGHLYFLIPTEAEEKKPKKAVRFAEPEKE-----IGGGV
        MGNCNCLFVD KPIRIMKTDGKILEYKSPTRVFQVLSDFSGH+ISDAVPVTHHLHRTAKLLSGHLYFLIP E  EKKPKKAVRFAEPEKE      GGGV
Subjt:  MGNCNCLFVDQKPIRIMKTDGKILEYKSPTRVFQVLSDFSGHQISDAVPVTHHLHRTAKLLSGHLYFLIPTEAEEKKPKKAVRFAEPEKE-----IGGGV

Query:  VRIKVVMTKKELQEMVERGGITAEEMICKIKSGSGEINCR------ELEGEDEESELQRWKPVLESIPESEVAC
        VRIKVVMTKKELQEMVERGGI+AEEMICKIK+G GEI+ R      E E EDEESELQRWKPVLESIPESEVAC
Subjt:  VRIKVVMTKKELQEMVERGGITAEEMICKIKSGSGEINCR------ELEGEDEESELQRWKPVLESIPESEVAC

A0A5A7SLB3 Uncharacterized protein7.4e-6585.99Show/hide
Query:  MKTDGKILEYKSPTRVFQVLSDFSGHQISDAVPVTHHLHRTAKLLSGHLYFLIPTEAEEKKPKKAVRFAEPEKE-----IGGGVVRIKVVMTKKELQEMV
        MKTDGKILEYKSPTRVFQVLSDFSGH+ISDAVPVTHHLHRTAKLLSGHLYFLIP E +EKKPKKAVRFAEPEKE      GGGVVRIKVVMTKKELQEMV
Subjt:  MKTDGKILEYKSPTRVFQVLSDFSGHQISDAVPVTHHLHRTAKLLSGHLYFLIPTEAEEKKPKKAVRFAEPEKE-----IGGGVVRIKVVMTKKELQEMV

Query:  ERGGITAEEMICKIKSGSGEINCR-----ELEGEDEESELQRWKPVLESIPESEVAC
        ERGGI+AEEMICKIK+G GEI+ R     E E EDEESELQRWKPVLESIPESEVAC
Subjt:  ERGGITAEEMICKIKSGSGEINCR-----ELEGEDEESELQRWKPVLESIPESEVAC

A0A6J1I5B2 uncharacterized protein LOC1114711581.5e-6581.33Show/hide
Query:  NCLFVDQKPIRIMKTDGKILEYKSPTRVFQVLSDFSGHQISDAVPVTHHLHRTAKLLSGHLYFLIPT---EAEEKKPKKAVRFAEPEKEIGGG---VVRI
        NCL V+QKPIRIMK DGKILEYKSPTRVFQVLSDFSGH ISDAVPVTHHL +T KLLSGHLYFLIPT   EA EK+ KKAVRFAEPEKE GGG   V+RI
Subjt:  NCLFVDQKPIRIMKTDGKILEYKSPTRVFQVLSDFSGHQISDAVPVTHHLHRTAKLLSGHLYFLIPT---EAEEKKPKKAVRFAEPEKEIGGG---VVRI

Query:  KVVMTKKELQEMVERGGITAEEMICKIKSGSGEINCRELEGEDE-ESELQRWKPVLESIPESEVAC
        KVVMTKKEL+EMVERGGITA+EMICKIKSGSGEI+CRELE E+E + EL +W+P L+SIPESEVAC
Subjt:  KVVMTKKELQEMVERGGITAEEMICKIKSGSGEINCRELEGEDE-ESELQRWKPVLESIPESEVAC

A0A6J1IRC0 uncharacterized protein LOC1114777652.1e-6781.18Show/hide
Query:  MGNCNCLFVDQKPIRIMKTDGKILEYKSPTRVFQVLSDFSGHQISDAVPVTHHLHRTAKLLSGHLYFLIPTEAEEKKPKKAVRFAEPEK----EIGGG--
        MGN NCLFVDQKPIRIMKTDGKILEYKSPTRVFQVLSDFSGHQISDAVPV+ HLH TAKLL+GHLYFLIPTEA EKKPKK VRFA+ EK    E GGG  
Subjt:  MGNCNCLFVDQKPIRIMKTDGKILEYKSPTRVFQVLSDFSGHQISDAVPVTHHLHRTAKLLSGHLYFLIPTEAEEKKPKKAVRFAEPEK----EIGGG--

Query:  -VVRIKVVMTKKELQEMVERGGITAEEMICKIKSGSGEINCRELEGEDEESELQRWKPVLESIPESEVAC
         VVRIK+VMTKKELQEMVERGGI+ +EM+CKIKSGSGEI+C EL    EE+E QRWKP L+SIPESEVAC
Subjt:  -VVRIKVVMTKKELQEMVERGGITAEEMICKIKSGSGEINCRELEGEDEESELQRWKPVLESIPESEVAC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G10120.1 unknown protein1.7e-2436.31Show/hide
Query:  NCLFVDQKPIRIMKTDGKILEYKSPTRVFQVLSDFSGH-QISDAVPVTHHLHRTAKLLSGHLYFLIPTEAEE----KKPKKAVRFAEPE-----------
        NCL +++K I+IM+ DGK++EY+ P +V  +L+ FS H  + D++    HLH  AKLL G LY+L+P E       KK  K VRFA PE           
Subjt:  NCLFVDQKPIRIMKTDGKILEYKSPTRVFQVLSDFSGH-QISDAVPVTHHLHRTAKLLSGHLYFLIPTEAEE----KKPKKAVRFAEPE-----------

Query:  -------KEIGGGVVRIKVVMTKKELQEMVERGGITAEEMICKIKSGSGEINCRELEGEDEESELQRWKPVLESIPESE
               KE   GVVR+K+V++K+EL+++++ G +   EM+ +       +  + L  +D+E   + W+P+L+SIPE++
Subjt:  -------KEIGGGVVRIKVVMTKKELQEMVERGGITAEEMICKIKSGSGEINCRELEGEDEESELQRWKPVLESIPESE

AT3G21680.1 unknown protein5.9e-0634.04Show/hide
Query:  LIPTEAEEKKPKKAVRFAEPEKEIGGGVVRIKVVMTKKELQEMV-ERGGITA-EEMICKIKSGSGEINCRELEGEDEESELQRWKPVLESIPES
        L+    E K   +    +E   E    VVRIKVV+TKKEL++++  + GI + ++++  +K     I+    E +++E   + W+P LESIPES
Subjt:  LIPTEAEEKKPKKAVRFAEPEKEIGGGVVRIKVVMTKKELQEMV-ERGGITA-EEMICKIKSGSGEINCRELEGEDEESELQRWKPVLESIPES

AT5G03890.1 unknown protein9.1e-2336.02Show/hide
Query:  NCLFVDQKPIRIMKTDGKILEYKSPTRVFQVLSDFSGHQISDAVPVTHHLHRTAKLLSGHLYFLIPTEAEEKKPKKAVRFAEPEKE--------------
        NCL +++K I+I++ DGK+LEY+ P  V  +L+ FSGH IS       HL   AKLLSG LY+L+PT   +KK  K V FA PE E              
Subjt:  NCLFVDQKPIRIMKTDGKILEYKSPTRVFQVLSDFSGHQISDAVPVTHHLHRTAKLLSGHLYFLIPTEAEEKKPKKAVRFAEPEKE--------------

Query:  ----IGGG------VVRIKVVMTKKELQEMVERGGI------TAEEMICKIKSGSGEINCRELEGEDEESELQRWKPVLESIPESE
            I G       VVR+K+V+ K+EL+++++ G +      T E+ +    S   ++ C              W+P L+SIPESE
Subjt:  ----IGGG------VVRIKVVMTKKELQEMVERGGI------TAEEMICKIKSGSGEINCRELEGEDEESELQRWKPVLESIPESE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCAATTGTAATTGTTTGTTCGTCGACCAAAAACCCATCAGAATCATGAAAACCGACGGCAAAATCCTCGAATACAAATCCCCCACTAGAGTCTTCCAAGTCCTCTC
CGATTTCTCCGGCCACCAAATCTCCGACGCCGTTCCAGTCACCCACCATCTCCACCGTACCGCCAAGCTCCTCTCCGGCCACCTCTATTTTCTGATCCCCACGGAAGCAG
AGGAGAAAAAGCCGAAAAAGGCAGTCCGGTTTGCGGAACCAGAGAAGGAAATCGGCGGCGGGGTGGTCAGAATAAAAGTGGTTATGACGAAGAAGGAGCTGCAGGAGATG
GTTGAAAGAGGGGGGATTACGGCGGAGGAAATGATTTGTAAGATAAAAAGTGGAAGTGGGGAAATTAATTGCAGAGAATTGGAGGGAGAGGATGAGGAATCGGAGTTGCA
GAGATGGAAGCCGGTTCTTGAAAGTATACCGGAAAGTGAAGTTGCTTGCCAGTGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGCAATTGTAATTGTTTGTTCGTCGACCAAAAACCCATCAGAATCATGAAAACCGACGGCAAAATCCTCGAATACAAATCCCCCACTAGAGTCTTCCAAGTCCTCTC
CGATTTCTCCGGCCACCAAATCTCCGACGCCGTTCCAGTCACCCACCATCTCCACCGTACCGCCAAGCTCCTCTCCGGCCACCTCTATTTTCTGATCCCCACGGAAGCAG
AGGAGAAAAAGCCGAAAAAGGCAGTCCGGTTTGCGGAACCAGAGAAGGAAATCGGCGGCGGGGTGGTCAGAATAAAAGTGGTTATGACGAAGAAGGAGCTGCAGGAGATG
GTTGAAAGAGGGGGGATTACGGCGGAGGAAATGATTTGTAAGATAAAAAGTGGAAGTGGGGAAATTAATTGCAGAGAATTGGAGGGAGAGGATGAGGAATCGGAGTTGCA
GAGATGGAAGCCGGTTCTTGAAAGTATACCGGAAAGTGAAGTTGCTTGCCAGTGTTAG
Protein sequenceShow/hide protein sequence
MGNCNCLFVDQKPIRIMKTDGKILEYKSPTRVFQVLSDFSGHQISDAVPVTHHLHRTAKLLSGHLYFLIPTEAEEKKPKKAVRFAEPEKEIGGGVVRIKVVMTKKELQEM
VERGGITAEEMICKIKSGSGEINCRELEGEDEESELQRWKPVLESIPESEVACQC