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Lsi01G012210 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G012210
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptioncytochrome b-c1 complex subunit 9-like
Genome locationchr01:10435480..10437916
RNA-Seq ExpressionLsi01G012210
SyntenyLsi01G012210
Gene Ontology termsGO:0006122 - mitochondrial electron transport, ubiquinol to cytochrome c (biological process)
GO:0005750 - mitochondrial respiratory chain complex III (cellular component)
InterPro domainsIPR008027 - Cytochrome b-c1 complex subunit 9
IPR036656 - Cytochrome b-c1 complex subunit 9 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7017456.1 hypothetical protein SDJN02_19321, partial [Cucurbita argyrosperma subsp. argyrosperma]7.7e-2354.93Show/hide
Query:  TKRRTLFPFNSIVSKSQHHRRREALRIELRRSGGRRLSQYITLMDSAARSSGGGLLEGLYRVIMRRNSVYVTFIIAGAFVGERYCNLEHASLLNSVPLMQ
        T + T FP     S S + RR + L     RS G+ L++  T M+SA R SGGGL EGLYRVIMRRNSVYVTFIIAGAF+GER                 
Subjt:  TKRRTLFPFNSIVSKSQHHRRREALRIELRRSGGRRLSQYITLMDSAARSSGGGLLEGLYRVIMRRNSVYVTFIIAGAFVGERYCNLEHASLLNSVPLMQ

Query:  AIDYGVHKLWERNNVGSSRPYSMLSEKRYEDISVLGQRQSEE
        A+DYGVHKLWE NNVG          KRYEDISVLGQR SEE
Subjt:  AIDYGVHKLWERNNVGSSRPYSMLSEKRYEDISVLGQRQSEE

XP_022132374.1 cytochrome b-c1 complex subunit 9-like [Momordica charantia]1.7e-2267.68Show/hide
Query:  MDSAARSSGGGLLEGLYRVIMRRNSVYVTFIIAGAFVGERYCNLEHASLLNSVPLMQAIDYGVHKLWERNNVGSSRPYSMLSEKRYEDISVLGQRQSEE
        MDSAAR  GGGLLEGLYRVIMRRNSVYVTFIIAGAFVGER                 A+DYGVHKLWE NNVG          KRYEDISVLGQR SEE
Subjt:  MDSAARSSGGGLLEGLYRVIMRRNSVYVTFIIAGAFVGERYCNLEHASLLNSVPLMQAIDYGVHKLWERNNVGSSRPYSMLSEKRYEDISVLGQRQSEE

XP_022144609.1 cytochrome b-c1 complex subunit 9-like [Momordica charantia]7.7e-2367.68Show/hide
Query:  MDSAARSSGGGLLEGLYRVIMRRNSVYVTFIIAGAFVGERYCNLEHASLLNSVPLMQAIDYGVHKLWERNNVGSSRPYSMLSEKRYEDISVLGQRQSEE
        M+SA R SGGGLLEGLYRVIMRRNSVYVTFIIAGAFVGER                 A+DYGVHKLWE NNVG          KRYEDISVLGQRQSEE
Subjt:  MDSAARSSGGGLLEGLYRVIMRRNSVYVTFIIAGAFVGERYCNLEHASLLNSVPLMQAIDYGVHKLWERNNVGSSRPYSMLSEKRYEDISVLGQRQSEE

XP_038881020.1 cytochrome b-c1 complex subunit 9-like isoform X3 [Benincasa hispida]5.9e-2368.69Show/hide
Query:  MDSAARSSGGGLLEGLYRVIMRRNSVYVTFIIAGAFVGERYCNLEHASLLNSVPLMQAIDYGVHKLWERNNVGSSRPYSMLSEKRYEDISVLGQRQSEE
        MDSAAR SGGGLLEGLYRVIMRRNSVYVTFIIAGAFVGER                 A+DYGVHKLWE NNVG          KRYEDISVLGQR SEE
Subjt:  MDSAARSSGGGLLEGLYRVIMRRNSVYVTFIIAGAFVGERYCNLEHASLLNSVPLMQAIDYGVHKLWERNNVGSSRPYSMLSEKRYEDISVLGQRQSEE

XP_038881369.1 cytochrome b-c1 complex subunit 9-like [Benincasa hispida]1.8e-2470.71Show/hide
Query:  MDSAARSSGGGLLEGLYRVIMRRNSVYVTFIIAGAFVGERYCNLEHASLLNSVPLMQAIDYGVHKLWERNNVGSSRPYSMLSEKRYEDISVLGQRQSEE
        MDSAAR SGGGLLEGLYRVIMRRNSVYVTFIIAGAFVGER                 A+DYGVHKLWERNNVG          KRYEDISVLGQRQSEE
Subjt:  MDSAARSSGGGLLEGLYRVIMRRNSVYVTFIIAGAFVGERYCNLEHASLLNSVPLMQAIDYGVHKLWERNNVGSSRPYSMLSEKRYEDISVLGQRQSEE

TrEMBL top hitse value%identityAlignment
A0A5N5I7J7 Cytochrome b-c1 complex subunit 9-like1.4e-2265.66Show/hide
Query:  MDSAARSSGGGLLEGLYRVIMRRNSVYVTFIIAGAFVGERYCNLEHASLLNSVPLMQAIDYGVHKLWERNNVGSSRPYSMLSEKRYEDISVLGQRQSEE
        MDSAAR SGGGL EGLYRVIMRRNSVYVTF+IAGAF+GER                 A+DYGVHKLWE NNVG          KRYEDISVLG RQSEE
Subjt:  MDSAARSSGGGLLEGLYRVIMRRNSVYVTFIIAGAFVGERYCNLEHASLLNSVPLMQAIDYGVHKLWERNNVGSSRPYSMLSEKRYEDISVLGQRQSEE

A0A6J1BSW3 cytochrome b-c1 complex subunit 9-like8.4e-2367.68Show/hide
Query:  MDSAARSSGGGLLEGLYRVIMRRNSVYVTFIIAGAFVGERYCNLEHASLLNSVPLMQAIDYGVHKLWERNNVGSSRPYSMLSEKRYEDISVLGQRQSEE
        MDSAAR  GGGLLEGLYRVIMRRNSVYVTFIIAGAFVGER                 A+DYGVHKLWE NNVG          KRYEDISVLGQR SEE
Subjt:  MDSAARSSGGGLLEGLYRVIMRRNSVYVTFIIAGAFVGERYCNLEHASLLNSVPLMQAIDYGVHKLWERNNVGSSRPYSMLSEKRYEDISVLGQRQSEE

A0A6J1CST4 cytochrome b-c1 complex subunit 9-like3.8e-2367.68Show/hide
Query:  MDSAARSSGGGLLEGLYRVIMRRNSVYVTFIIAGAFVGERYCNLEHASLLNSVPLMQAIDYGVHKLWERNNVGSSRPYSMLSEKRYEDISVLGQRQSEE
        M+SA R SGGGLLEGLYRVIMRRNSVYVTFIIAGAFVGER                 A+DYGVHKLWE NNVG          KRYEDISVLGQRQSEE
Subjt:  MDSAARSSGGGLLEGLYRVIMRRNSVYVTFIIAGAFVGERYCNLEHASLLNSVPLMQAIDYGVHKLWERNNVGSSRPYSMLSEKRYEDISVLGQRQSEE

A0A6J1I6G5 cytochrome b-c1 complex subunit 9-like1.9e-2266.67Show/hide
Query:  MDSAARSSGGGLLEGLYRVIMRRNSVYVTFIIAGAFVGERYCNLEHASLLNSVPLMQAIDYGVHKLWERNNVGSSRPYSMLSEKRYEDISVLGQRQSEE
        MDSAAR SGGGL EGLYRVIMRRNSVYVTFIIAGAF+GER                 A+DYGVHKLWE NNVG          KRYEDISVLGQR SEE
Subjt:  MDSAARSSGGGLLEGLYRVIMRRNSVYVTFIIAGAFVGERYCNLEHASLLNSVPLMQAIDYGVHKLWERNNVGSSRPYSMLSEKRYEDISVLGQRQSEE

A0A6P4ALE1 cytochrome b-c1 complex subunit 92.4e-2265.66Show/hide
Query:  MDSAARSSGGGLLEGLYRVIMRRNSVYVTFIIAGAFVGERYCNLEHASLLNSVPLMQAIDYGVHKLWERNNVGSSRPYSMLSEKRYEDISVLGQRQSEE
        MDSAAR SGGGL EGLYRVIMRRNSVYVTFIIAGAF+GER                 A+DYGVHK+WE NNVG          KRYEDI VLGQRQSEE
Subjt:  MDSAARSSGGGLLEGLYRVIMRRNSVYVTFIIAGAFVGERYCNLEHASLLNSVPLMQAIDYGVHKLWERNNVGSSRPYSMLSEKRYEDISVLGQRQSEE

SwissProt top hitse value%identityAlignment
P46270 Cytochrome b-c1 complex subunit 92.4e-1954.55Show/hide
Query:  MDSAARSSGGGLLEGLYRVIMRRNSVYVTFIIAGAFVGERYCNLEHASLLNSVPLMQAIDYGVHKLWERNNVGSSRPYSMLSEKRYEDISVLGQRQSEE
        M+SAAR SGGG+LEG YR++MRR  VYVTF+IAGA +GER                 A+DYGV  LWE+NNVG          KRYEDISVLGQR  +E
Subjt:  MDSAARSSGGGLLEGLYRVIMRRNSVYVTFIIAGAFVGERYCNLEHASLLNSVPLMQAIDYGVHKLWERNNVGSSRPYSMLSEKRYEDISVLGQRQSEE

Q9LXJ2 Cytochrome b-c1 complex subunit 9, mitochondrial8.3e-2057.58Show/hide
Query:  MDSAARSSGGGLLEGLYRVIMRRNSVYVTFIIAGAFVGERYCNLEHASLLNSVPLMQAIDYGVHKLWERNNVGSSRPYSMLSEKRYEDISVLGQRQSEE
        M+ AAR +  G  EG Y++IMRRNSVYVTFIIAGAF GER                 A+DYGVHKLWERNNVG          KRYEDISVLGQR  EE
Subjt:  MDSAARSSGGGLLEGLYRVIMRRNSVYVTFIIAGAFVGERYCNLEHASLLNSVPLMQAIDYGVHKLWERNNVGSSRPYSMLSEKRYEDISVLGQRQSEE

Arabidopsis top hitse value%identityAlignment
AT3G52730.1 ubiquinol-cytochrome C reductase UQCRX/QCR9-like family protein5.9e-2157.58Show/hide
Query:  MDSAARSSGGGLLEGLYRVIMRRNSVYVTFIIAGAFVGERYCNLEHASLLNSVPLMQAIDYGVHKLWERNNVGSSRPYSMLSEKRYEDISVLGQRQSEE
        M+ AAR +  G  EG Y++IMRRNSVYVTFIIAGAF GER                 A+DYGVHKLWERNNVG          KRYEDISVLGQR  EE
Subjt:  MDSAARSSGGGLLEGLYRVIMRRNSVYVTFIIAGAFVGERYCNLEHASLLNSVPLMQAIDYGVHKLWERNNVGSSRPYSMLSEKRYEDISVLGQRQSEE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTGAACCGAACCGATCAACCAATAACCAAAAGAAGAACTCTCTTCCCCTTCAATTCAATCGTCTCAAAATCTCAACATCATCGCAGAAGAGAAGCCCTTCGAATCGAATT
ACGTAGATCAGGAGGAAGAAGGTTAAGCCAGTACATCACGCTAATGGATTCTGCAGCTCGTAGCAGCGGAGGAGGCCTCCTTGAAGGGCTTTACAGAGTTATTATGCGCC
GGAACTCCGTTTATGTCACCTTCATTATCGCCGGCGCTTTTGTTGGCGAGCGGTACTGCAACTTGGAGCATGCTTCTTTACTCAATTCGGTTCCCCTGATGCAGGCTATT
GATTATGGCGTTCACAAGCTCTGGGAACGCAACAACGTTGGGTCTTCCCGACCCTATTCCATGCTTTCTGAGAAACGATATGAGGATATTTCAGTTTTGGGGCAAAGACA
ATCAGAAGAATGA
mRNA sequenceShow/hide mRNA sequence
TTGAACCGAACCGATCAACCAATAACCAAAAGAAGAACTCTCTTCCCCTTCAATTCAATCGTCTCAAAATCTCAACATCATCGCAGAAGAGAAGCCCTTCGAATCGAATT
ACGTAGATCAGGAGGAAGAAGGTTAAGCCAGTACATCACGCTAATGGATTCTGCAGCTCGTAGCAGCGGAGGAGGCCTCCTTGAAGGGCTTTACAGAGTTATTATGCGCC
GGAACTCCGTTTATGTCACCTTCATTATCGCCGGCGCTTTTGTTGGCGAGCGGTACTGCAACTTGGAGCATGCTTCTTTACTCAATTCGGTTCCCCTGATGCAGGCTATT
GATTATGGCGTTCACAAGCTCTGGGAACGCAACAACGTTGGGTCTTCCCGACCCTATTCCATGCTTTCTGAGAAACGATATGAGGATATTTCAGTTTTGGGGCAAAGACA
ATCAGAAGAATGA
Protein sequenceShow/hide protein sequence
LNRTDQPITKRRTLFPFNSIVSKSQHHRRREALRIELRRSGGRRLSQYITLMDSAARSSGGGLLEGLYRVIMRRNSVYVTFIIAGAFVGERYCNLEHASLLNSVPLMQAI
DYGVHKLWERNNVGSSRPYSMLSEKRYEDISVLGQRQSEE