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Lsi01G012750 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G012750
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionThreonine dehydratase
Genome locationchr01:11021648..11023842
RNA-Seq ExpressionLsi01G012750
SyntenyLsi01G012750
Gene Ontology termsGO:0006567 - threonine catabolic process (biological process)
GO:0009097 - isoleucine biosynthetic process (biological process)
GO:0004794 - L-threonine ammonia-lyase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025312.1 threonine dehydratase biosynthetic [Cucumis melo var. makuwa]7.9e-0554.55Show/hide
Query:  RNKISGVSKVPKVSSDNTWYPLGMLGAIPKRPE-IDREMQIKYLTAILSSKVYDV
        +N  + + K+P VS     YP G LGA+PKRPE ID + Q++YL  ILSSKVYDV
Subjt:  RNKISGVSKVPKVSSDNTWYPLGMLGAIPKRPE-IDREMQIKYLTAILSSKVYDV

KAA0025315.1 threonine dehydratase biosynthetic [Cucumis melo var. makuwa]1.0e-0439.09Show/hide
Query:  SLNVLLIIVQNMEPLLLFTTTTTVLN-SLTQKSLLPLSQSSFSFGHSSIK----LRNKISGVSKVPKVSSDNTWYPLGMLGAIPKRPE-IDREMQIKYLT
        S  + +++  N+  ++LF +   +    +  K    L  S+ S  +++ K    +   I+ V+ VP+VS  +  YP GMLGAIPKRPE ID   Q+KYL 
Subjt:  SLNVLLIIVQNMEPLLLFTTTTTVLN-SLTQKSLLPLSQSSFSFGHSSIK----LRNKISGVSKVPKVSSDNTWYPLGMLGAIPKRPE-IDREMQIKYLT

Query:  AILSSKVYDV
         ILSSKVYDV
Subjt:  AILSSKVYDV

TYK07357.1 threonine dehydratase biosynthetic [Cucumis melo var. makuwa]7.9e-0554.55Show/hide
Query:  RNKISGVSKVPKVSSDNTWYPLGMLGAIPKRPE-IDREMQIKYLTAILSSKVYDV
        +N  + + K+P VS     YP G LGA+PKRPE ID + Q++YL  ILSSKVYDV
Subjt:  RNKISGVSKVPKVSSDNTWYPLGMLGAIPKRPE-IDREMQIKYLTAILSSKVYDV

XP_004143369.1 threonine dehydratase biosynthetic, chloroplastic [Cucumis sativus]1.2e-0844.27Show/hide
Query:  LLFTTTTTVLNSLTQKSLLPLSQSSFSFGHSSIKLRNK------------ISGVSKVPKVSSDN-------------------------TW----YPLGM
        LL TTTT+V NSL  KSLLP SQ S    HSSI+L N+            ++ +SK+PK S+++                         +W    YP GM
Subjt:  LLFTTTTTVLNSLTQKSLLPLSQSSFSFGHSSIKLRNK------------ISGVSKVPKVSSDN-------------------------TW----YPLGM

Query:  LGAIPKRPE-IDREMQIKYLTAILSSKVYDV
        LGAIPKRPE ID   Q++YLT ILSSKVYDV
Subjt:  LGAIPKRPE-IDREMQIKYLTAILSSKVYDV

XP_008465584.1 PREDICTED: threonine dehydratase biosynthetic, chloroplastic-like [Cucumis melo]7.9e-0554.55Show/hide
Query:  RNKISGVSKVPKVSSDNTWYPLGMLGAIPKRPE-IDREMQIKYLTAILSSKVYDV
        +N  + + K+P VS     YP G LGA+PKRPE ID + Q++YL  ILSSKVYDV
Subjt:  RNKISGVSKVPKVSSDNTWYPLGMLGAIPKRPE-IDREMQIKYLTAILSSKVYDV

TrEMBL top hitse value%identityAlignment
A0A0A0KHC3 Threonine dehydratase5.7e-0944.27Show/hide
Query:  LLFTTTTTVLNSLTQKSLLPLSQSSFSFGHSSIKLRNK------------ISGVSKVPKVSSDN-------------------------TW----YPLGM
        LL TTTT+V NSL  KSLLP SQ S    HSSI+L N+            ++ +SK+PK S+++                         +W    YP GM
Subjt:  LLFTTTTTVLNSLTQKSLLPLSQSSFSFGHSSIKLRNK------------ISGVSKVPKVSSDN-------------------------TW----YPLGM

Query:  LGAIPKRPE-IDREMQIKYLTAILSSKVYDV
        LGAIPKRPE ID   Q++YLT ILSSKVYDV
Subjt:  LGAIPKRPE-IDREMQIKYLTAILSSKVYDV

A0A1S3CP75 Threonine dehydratase3.8e-0554.55Show/hide
Query:  RNKISGVSKVPKVSSDNTWYPLGMLGAIPKRPE-IDREMQIKYLTAILSSKVYDV
        +N  + + K+P VS     YP G LGA+PKRPE ID + Q++YL  ILSSKVYDV
Subjt:  RNKISGVSKVPKVSSDNTWYPLGMLGAIPKRPE-IDREMQIKYLTAILSSKVYDV

A0A5A7SJE6 Threonine dehydratase3.8e-0554.55Show/hide
Query:  RNKISGVSKVPKVSSDNTWYPLGMLGAIPKRPE-IDREMQIKYLTAILSSKVYDV
        +N  + + K+P VS     YP G LGA+PKRPE ID + Q++YL  ILSSKVYDV
Subjt:  RNKISGVSKVPKVSSDNTWYPLGMLGAIPKRPE-IDREMQIKYLTAILSSKVYDV

A0A5A7SLH6 Threonine dehydratase biosynthetic5.0e-0539.09Show/hide
Query:  SLNVLLIIVQNMEPLLLFTTTTTVLN-SLTQKSLLPLSQSSFSFGHSSIK----LRNKISGVSKVPKVSSDNTWYPLGMLGAIPKRPE-IDREMQIKYLT
        S  + +++  N+  ++LF +   +    +  K    L  S+ S  +++ K    +   I+ V+ VP+VS  +  YP GMLGAIPKRPE ID   Q+KYL 
Subjt:  SLNVLLIIVQNMEPLLLFTTTTTVLN-SLTQKSLLPLSQSSFSFGHSSIK----LRNKISGVSKVPKVSSDNTWYPLGMLGAIPKRPE-IDREMQIKYLT

Query:  AILSSKVYDV
         ILSSKVYDV
Subjt:  AILSSKVYDV

A0A5D3C648 Threonine dehydratase3.8e-0554.55Show/hide
Query:  RNKISGVSKVPKVSSDNTWYPLGMLGAIPKRPE-IDREMQIKYLTAILSSKVYDV
        +N  + + K+P VS     YP G LGA+PKRPE ID + Q++YL  ILSSKVYDV
Subjt:  RNKISGVSKVPKVSSDNTWYPLGMLGAIPKRPE-IDREMQIKYLTAILSSKVYDV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G10050.1 L-O-methylthreonine resistant 19.3e-0446.81Show/hide
Query:  KVSSDNTWYPLGMLGAIPKRPEIDREMQI----KYLTAILSSKVYDV
        KVS ++  YP G LGA+P+R        I    +YLT ILS+KVYD+
Subjt:  KVSSDNTWYPLGMLGAIPKRPEIDREMQI----KYLTAILSSKVYDV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCCATTTTGTTTTGGTTCATTCAAACCAGTCGATCTATGCTTCGGCTGAAAGTACCGATTTCAAAATACTGTATGAGCTTTCTTCTTGTTATTTCCATAGACCC
AAAACTTGCAAGAATTTTAGTACTGGTAGAGCAGAGCACACCTACTTTCTCTCTAAATGTCTTGCTCATTATTGTCCAAAATATGGAGCCCCTTCTTCTTTTCACAACCA
CAACCACTGTGCTAAACTCACTCACCCAAAAATCTTTGCTTCCATTATCTCAATCCTCCTTCTCCTTTGGACACTCTTCCATTAAACTTCGCAACAAAATATCAGGCGTT
TCAAAGGTTCCAAAGGTGTCGTCGGATAACACGTGGTACCCACTTGGGATGCTCGGTGCTATTCCCAAACGGCCAGAGATCGATAGAGAAATGCAGATAAAGTATTTGAC
TGCTATACTGTCTTCCAAAGTCTACGATGTACTACACCTAAGATACATATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGCCATTTTGTTTTGGTTCATTCAAACCAGTCGATCTATGCTTCGGCTGAAAGTACCGATTTCAAAATACTGTATGAGCTTTCTTCTTGTTATTTCCATAGACCC
AAAACTTGCAAGAATTTTAGTACTGGTAGAGCAGAGCACACCTACTTTCTCTCTAAATGTCTTGCTCATTATTGTCCAAAATATGGAGCCCCTTCTTCTTTTCACAACCA
CAACCACTGTGCTAAACTCACTCACCCAAAAATCTTTGCTTCCATTATCTCAATCCTCCTTCTCCTTTGGACACTCTTCCATTAAACTTCGCAACAAAATATCAGGCGTT
TCAAAGGTTCCAAAGGTGTCGTCGGATAACACGTGGTACCCACTTGGGATGCTCGGTGCTATTCCCAAACGGCCAGAGATCGATAGAGAAATGCAGATAAAGTATTTGAC
TGCTATACTGTCTTCCAAAGTCTACGATGTACTACACCTAAGATACATATGA
Protein sequenceShow/hide protein sequence
MAAILFWFIQTSRSMLRLKVPISKYCMSFLLVISIDPKLARILVLVEQSTPTFSLNVLLIIVQNMEPLLLFTTTTTVLNSLTQKSLLPLSQSSFSFGHSSIKLRNKISGV
SKVPKVSSDNTWYPLGMLGAIPKRPEIDREMQIKYLTAILSSKVYDVLHLRYI