CuGenDBv2

Gene ID	Lsi01G012840
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	protein SHOOT GRAVITROPISM 6
Genome location	chr01:11113936..11114845
RNA-Seq Expression	Lsi01G012840
Synteny	Lsi01G012840
Gene Ontology terms	GO:0008194 - UDP-glycosyltransferase activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

TYK07351.1 protein SHOOT GRAVITROPISM 6 [Cucumis melo var. makuwa]

5.0e-47

98.11

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Query:  MASSGSGNSIPAPEAVQILVSSLADESPIVREASMASLKDIATLNPLLVLDCCYAVSRGGRRRFGNMAGAFLVMSFGVRALDKEDVDPAFMSKLAKISTT
        MASSGS NSIPAPEAVQILVSSLADESP+VREASMASLKDIATLNPLLVLDCCYAVSRGGRRRFGNMAGAFLVMSFGVRALDKEDVDPAFMSKLAKISTT
Subjt:  MASSGSGNSIPAPEAVQILVSSLADESPIVREASMASLKDIATLNPLLVLDCCYAVSRGGRRRFGNMAGAFLVMSFGVRALDKEDVDPAFMSKLAKISTT

Query:  EIISSK
        EIISSK
Subjt:  EIISSK

XP_008462510.1 PREDICTED: protein SHOOT GRAVITROPISM 6 [Cucumis melo]

5.0e-47

98.11

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Query:  MASSGSGNSIPAPEAVQILVSSLADESPIVREASMASLKDIATLNPLLVLDCCYAVSRGGRRRFGNMAGAFLVMSFGVRALDKEDVDPAFMSKLAKISTT
        MASSGS NSIPAPEAVQILVSSLADESP+VREASMASLKDIATLNPLLVLDCCYAVSRGGRRRFGNMAGAFLVMSFGVRALDKEDVDPAFMSKLAKISTT
Subjt:  MASSGSGNSIPAPEAVQILVSSLADESPIVREASMASLKDIATLNPLLVLDCCYAVSRGGRRRFGNMAGAFLVMSFGVRALDKEDVDPAFMSKLAKISTT

Query:  EIISSK
        EIISSK
Subjt:  EIISSK

XP_011657679.1 protein SHOOT GRAVITROPISM 6 [Cucumis sativus]

2.9e-47

98.11

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Query:  MASSGSGNSIPAPEAVQILVSSLADESPIVREASMASLKDIATLNPLLVLDCCYAVSRGGRRRFGNMAGAFLVMSFGVRALDKEDVDPAFMSKLAKISTT
        MASSGSGNSIPAPEAVQILVSSLADESP+VREASMASLKDIATLNPLLVLDCCYAVSRGGRRRFGNMAGAFLVMSFGVRALD+EDVDPAFMSKLAKISTT
Subjt:  MASSGSGNSIPAPEAVQILVSSLADESPIVREASMASLKDIATLNPLLVLDCCYAVSRGGRRRFGNMAGAFLVMSFGVRALDKEDVDPAFMSKLAKISTT

Query:  EIISSK
        EIISSK
Subjt:  EIISSK

XP_038883575.1 protein SHOOT GRAVITROPISM 6 isoform X1 [Benincasa hispida]

1.1e-46

98.11

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Query:  MASSGSGNSIPAPEAVQILVSSLADESPIVREASMASLKDIATLNPLLVLDCCYAVSRGGRRRFGNMAGAFLVMSFGVRALDKEDVDPAFMSKLAKISTT
        MASS SGNSIPAPEAVQILVSSLADESP+VREASMASLKDIATLNPLLVLDCCYAVSRGGRRRFGNMAGAFLVMSFGVRALDKEDVDPAFMSKLAKISTT
Subjt:  MASSGSGNSIPAPEAVQILVSSLADESPIVREASMASLKDIATLNPLLVLDCCYAVSRGGRRRFGNMAGAFLVMSFGVRALDKEDVDPAFMSKLAKISTT

Query:  EIISSK
        EIISSK
Subjt:  EIISSK

XP_038883576.1 protein SHOOT GRAVITROPISM 6 isoform X2 [Benincasa hispida]

1.1e-46

98.11

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Query:  MASSGSGNSIPAPEAVQILVSSLADESPIVREASMASLKDIATLNPLLVLDCCYAVSRGGRRRFGNMAGAFLVMSFGVRALDKEDVDPAFMSKLAKISTT
        MASS SGNSIPAPEAVQILVSSLADESP+VREASMASLKDIATLNPLLVLDCCYAVSRGGRRRFGNMAGAFLVMSFGVRALDKEDVDPAFMSKLAKISTT
Subjt:  MASSGSGNSIPAPEAVQILVSSLADESPIVREASMASLKDIATLNPLLVLDCCYAVSRGGRRRFGNMAGAFLVMSFGVRALDKEDVDPAFMSKLAKISTT

Query:  EIISSK
        EIISSK
Subjt:  EIISSK

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CH33 protein SHOOT GRAVITROPISM 6

2.4e-47

98.11

Show/hide

Query:  MASSGSGNSIPAPEAVQILVSSLADESPIVREASMASLKDIATLNPLLVLDCCYAVSRGGRRRFGNMAGAFLVMSFGVRALDKEDVDPAFMSKLAKISTT
        MASSGS NSIPAPEAVQILVSSLADESP+VREASMASLKDIATLNPLLVLDCCYAVSRGGRRRFGNMAGAFLVMSFGVRALDKEDVDPAFMSKLAKISTT
Subjt:  MASSGSGNSIPAPEAVQILVSSLADESPIVREASMASLKDIATLNPLLVLDCCYAVSRGGRRRFGNMAGAFLVMSFGVRALDKEDVDPAFMSKLAKISTT

Query:  EIISSK
        EIISSK
Subjt:  EIISSK

A0A5D3C634 Protein SHOOT GRAVITROPISM 6

2.4e-47

98.11

Show/hide

Query:  MASSGSGNSIPAPEAVQILVSSLADESPIVREASMASLKDIATLNPLLVLDCCYAVSRGGRRRFGNMAGAFLVMSFGVRALDKEDVDPAFMSKLAKISTT
        MASSGS NSIPAPEAVQILVSSLADESP+VREASMASLKDIATLNPLLVLDCCYAVSRGGRRRFGNMAGAFLVMSFGVRALDKEDVDPAFMSKLAKISTT
Subjt:  MASSGSGNSIPAPEAVQILVSSLADESPIVREASMASLKDIATLNPLLVLDCCYAVSRGGRRRFGNMAGAFLVMSFGVRALDKEDVDPAFMSKLAKISTT

Query:  EIISSK
        EIISSK
Subjt:  EIISSK

A0A6J1CS52 protein SHOOT GRAVITROPISM 6

4.6e-46

97.17

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Query:  MASSGSGNSIPAPEAVQILVSSLADESPIVREASMASLKDIATLNPLLVLDCCYAVSRGGRRRFGNMAGAFLVMSFGVRALDKEDVDPAFMSKLAKISTT
        MASSGS NSIPAPEAVQILVSSLADESPIVREASMASLKDIA LNPLLVLDCCYAVSRGGRRRFGNMAGAFLVMSFGVRAL+KEDVDPAFMSKLAKISTT
Subjt:  MASSGSGNSIPAPEAVQILVSSLADESPIVREASMASLKDIATLNPLLVLDCCYAVSRGGRRRFGNMAGAFLVMSFGVRALDKEDVDPAFMSKLAKISTT

Query:  EIISSK
        EIISSK
Subjt:  EIISSK

A0A6J1IJZ3 protein SHOOT GRAVITROPISM 6 isoform X2

5.9e-46

96.23

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Query:  MASSGSGNSIPAPEAVQILVSSLADESPIVREASMASLKDIATLNPLLVLDCCYAVSRGGRRRFGNMAGAFLVMSFGVRALDKEDVDPAFMSKLAKISTT
        MASSGSGNSIPAPEAVQILVSSLADES +VREASMASLKDIA L+PLLVLDCCYAVSRGGRRRFGNMAGAFLVMSFGVRALDKEDVDPAFMSKLAKISTT
Subjt:  MASSGSGNSIPAPEAVQILVSSLADESPIVREASMASLKDIATLNPLLVLDCCYAVSRGGRRRFGNMAGAFLVMSFGVRALDKEDVDPAFMSKLAKISTT

Query:  EIISSK
        EIISSK
Subjt:  EIISSK

A0A6J1IMD7 protein SHOOT GRAVITROPISM 6 isoform X1

5.9e-46

96.23

Show/hide

Query:  MASSGSGNSIPAPEAVQILVSSLADESPIVREASMASLKDIATLNPLLVLDCCYAVSRGGRRRFGNMAGAFLVMSFGVRALDKEDVDPAFMSKLAKISTT
        MASSGSGNSIPAPEAVQILVSSLADES +VREASMASLKDIA L+PLLVLDCCYAVSRGGRRRFGNMAGAFLVMSFGVRALDKEDVDPAFMSKLAKISTT
Subjt:  MASSGSGNSIPAPEAVQILVSSLADESPIVREASMASLKDIATLNPLLVLDCCYAVSRGGRRRFGNMAGAFLVMSFGVRALDKEDVDPAFMSKLAKISTT

Query:  EIISSK
        EIISSK
Subjt:  EIISSK

SwissProt top hits

e value

%identity

Alignment

F4IP13 Protein SHOOT GRAVITROPISM 6

4.4e-38

78.3

Show/hide

Query:  MASSGSGNSIPAPEAVQILVSSLADESPIVREASMASLKDIATLNPLLVLDCCYAVSRGGRRRFGNMAGAFLVMSFGVRALDKEDVDPAFMSKLAKISTT
        MASS  G+SIPAPEAVQ+LVSSLAD+S +VREASMASL+DIA+LNPLLVLDCCYAVSRGGRRRFGNMAG F VM+F V AL+K + D  FM KLAKI+T 
Subjt:  MASSGSGNSIPAPEAVQILVSSLADESPIVREASMASLKDIATLNPLLVLDCCYAVSRGGRRRFGNMAGAFLVMSFGVRALDKEDVDPAFMSKLAKISTT

Query:  EIISSK
        EIISSK
Subjt:  EIISSK

Arabidopsis top hits

e value

%identity

Alignment

AT2G36810.1 ARM repeat superfamily protein

3.1e-39

78.3

Show/hide

Query:  MASSGSGNSIPAPEAVQILVSSLADESPIVREASMASLKDIATLNPLLVLDCCYAVSRGGRRRFGNMAGAFLVMSFGVRALDKEDVDPAFMSKLAKISTT
        MASS  G+SIPAPEAVQ+LVSSLAD+S +VREASMASL+DIA+LNPLLVLDCCYAVSRGGRRRFGNMAG F VM+F V AL+K + D  FM KLAKI+T 
Subjt:  MASSGSGNSIPAPEAVQILVSSLADESPIVREASMASLKDIATLNPLLVLDCCYAVSRGGRRRFGNMAGAFLVMSFGVRALDKEDVDPAFMSKLAKISTT

Query:  EIISSK
        EIISSK
Subjt:  EIISSK

Sequences

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CDS sequence

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ATGGCATCGTCGGGTTCCGGAAACTCAATTCCTGCACCAGAGGCTGTTCAAATTTTAGTTTCATCTCTTGCTGATGAATCGCCCATAGTGAGGGAGGCGTCCATGGCTTC
GCTTAAGGACATAGCTACATTGAATCCGCTTCTGGTTCTCGACTGCTGCTATGCTGTTTCACGAGGAGGACGCCGGCGTTTTGGAAATATGGCTGGAGCTTTTCTAGTAA
TGTCATTCGGAGTGCGAGCCTTGGACAAAGAAGATGTTGATCCAGCTTTCATGTCCAAGCTTGCAAAGATTTCGACGACTGAGATAATCTCTTCCAAGGTCTTTTTCATA
CTGAAGTTGTTGGTTCGGTTTCTATTTTTCCAATCTTTTTGGTTGTCACATTAA

mRNA sequence

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TAAAAAATGGAATTTTCTGTTGCATATAAGAATCTGAAGAATTCATGTCAAAAGAATTTTAGATCCACGGCCGTTGAAACTTGAGAATTGCTTGCCTCTTCCTTTCCCTG
TAAACTTGCCATGGAAATTTAACGAAGCAGCAGGATCGCTGTGCCAACCTCTCTAGGCTGTTGATTTTGTTTATATCCTGCCATGGCATCGTCGGGTTCCGGAAACTCAA
TTCCTGCACCAGAGGCTGTTCAAATTTTAGTTTCATCTCTTGCTGATGAATCGCCCATAGTGAGGGAGGCGTCCATGGCTTCGCTTAAGGACATAGCTACATTGAATCCG
CTTCTGGTTCTCGACTGCTGCTATGCTGTTTCACGAGGAGGACGCCGGCGTTTTGGAAATATGGCTGGAGCTTTTCTAGTAATGTCATTCGGAGTGCGAGCCTTGGACAA
AGAAGATGTTGATCCAGCTTTCATGTCCAAGCTTGCAAAGATTTCGACGACTGAGATAATCTCTTCCAAGGTCTTTTTCATACTGAAGTTGTTGGTTCGGTTTCTATTTT
TCCAATCTTTTTGGTTGTCACATTAA

Protein sequence

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MASSGSGNSIPAPEAVQILVSSLADESPIVREASMASLKDIATLNPLLVLDCCYAVSRGGRRRFGNMAGAFLVMSFGVRALDKEDVDPAFMSKLAKISTTEIISSKVFFI
LKLLVRFLFFQSFWLSH

Lsi01G012840 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome