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Lsi01G013020 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G013020
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionMYB-related transcription factor
Genome locationchr01:11291226..11296303
RNA-Seq ExpressionLsi01G013020
SyntenyLsi01G013020
Gene Ontology termsNA
InterPro domainsIPR001005 - SANT/Myb domain
IPR009057 - Homeobox-like domain superfamily
IPR017930 - Myb domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EYU41364.1 hypothetical protein MIMGU_mgv1a019098mg, partial [Erythranthe guttata]8.8e-4389.89Show/hide
Query:  MGRAPCCDKASVKRGPWSPEEDAKLKHHIHNHGTGGNWISLPQKAGLKRCGKSCRLRWLNYLRPNIKHGGFTEDEDRIICSLFTTIGSR
        MGRAPCCDKA+VKRGPWSPEED KLK +IHNHGTGGNWISLPQK GLKRCGKSCRLRWLNYLRPNIKHGGFTEDED +ICSL+ TIGSR
Subjt:  MGRAPCCDKASVKRGPWSPEEDAKLKHHIHNHGTGGNWISLPQKAGLKRCGKSCRLRWLNYLRPNIKHGGFTEDEDRIICSLFTTIGSR

XP_022948843.1 transcription factor MYB36-like [Cucurbita moschata]4.6e-4461.33Show/hide
Query:  MGRAPCCDKASVKRGPWSPEEDAKLKHHIHNHGTGGNWISLPQKAGLKRCGKSCRLRWLNYLRPNIKHGGFTEDEDRIICSLFTTIGSRRPDAALPTEVQ
        MGR+PCCDKA+VK+GPWSPEEDAKLK +IHNHGTGGNWISLPQKAGLKRCGKSCRLRWLNYLRPNIKHGGFTE+EDRIIC+LF+TIGSR   + + T++ 
Subjt:  MGRAPCCDKASVKRGPWSPEEDAKLKHHIHNHGTGGNWISLPQKAGLKRCGKSCRLRWLNYLRPNIKHGGFTEDEDRIICSLFTTIGSRRPDAALPTEVQ

Query:  AATTSATAEEKWNMTKMENSMLYFEM-----------FSPHDFDHCAPNF
          T +   +  WN +K++  ++  E            +S H  DH   +F
Subjt:  AATTSATAEEKWNMTKMENSMLYFEM-----------FSPHDFDHCAPNF

XP_022998892.1 transcription factor MYB36-like [Cucurbita maxima]3.6e-4461.74Show/hide
Query:  MGRAPCCDKASVKRGPWSPEEDAKLKHHIHNHGTGGNWISLPQKAGLKRCGKSCRLRWLNYLRPNIKHGGFTEDEDRIICSLFTTIGSRRPDAALPTEVQ
        MGR+PCCDKA+VK+GPWSPEEDAKLK +IHNHGTGGNWISLPQKAGLKRCGKSCRLRWLNYLRPNIKHGGFTE+EDRIIC+LF+TIGSR   + + T++ 
Subjt:  MGRAPCCDKASVKRGPWSPEEDAKLKHHIHNHGTGGNWISLPQKAGLKRCGKSCRLRWLNYLRPNIKHGGFTEDEDRIICSLFTTIGSRRPDAALPTEVQ

Query:  AATTSATAEEKWNMTKMENSMLYFEM----------FSPHDFDHCAPNF
          T +   +  WN +K++  ++  E           +S H  DH   +F
Subjt:  AATTSATAEEKWNMTKMENSMLYFEM----------FSPHDFDHCAPNF

XP_023524586.1 transcription factor MYB36-like [Cucurbita pepo subsp. pepo]1.0e-4360.67Show/hide
Query:  MGRAPCCDKASVKRGPWSPEEDAKLKHHIHNHGTGGNWISLPQKAGLKRCGKSCRLRWLNYLRPNIKHGGFTEDEDRIICSLFTTIGSRRPDAALPTEVQ
        MGR+PCCDKA+VK+GPWSPEEDAKLK +IHNHGTGGNWISLPQKAGLKRCGKSCRLRWLNYLRPNIKHGGFTE+EDRIIC+L++TIGSR   + + T++ 
Subjt:  MGRAPCCDKASVKRGPWSPEEDAKLKHHIHNHGTGGNWISLPQKAGLKRCGKSCRLRWLNYLRPNIKHGGFTEDEDRIICSLFTTIGSRRPDAALPTEVQ

Query:  AATTSATAEEKWNMTKMENSMLYFEM-----------FSPHDFDHCAPNF
          T +   +  WN +K++  ++  E            +S H  DH   +F
Subjt:  AATTSATAEEKWNMTKMENSMLYFEM-----------FSPHDFDHCAPNF

XP_038882300.1 transcription factor RAX2-like [Benincasa hispida]3.9e-4363.95Show/hide
Query:  MGRAPCCDKASVKRGPWSPEEDAKLKHHIHNHGTGGNWISLPQKAGLKRCGKSCRLRWLNYLRPNIKHGGFTEDEDRIICSLFTTIGSRRP--DAALP--
        MGR+PCCDKASVK+GPWSPEEDAKLK HIHNHGTGGNWISLP +AGLKRCGKSCRLRWLNYLRP+IKHG FTEDEDRIICSLF TIGSR     A LP  
Subjt:  MGRAPCCDKASVKRGPWSPEEDAKLKHHIHNHGTGGNWISLPQKAGLKRCGKSCRLRWLNYLRPNIKHGGFTEDEDRIICSLFTTIGSRRP--DAALP--

Query:  TEVQAATTSATAEEKWNMTKMENSMLYFEMFSPHDFDHCAPNFDKKS
        T+        T  +K  MT + +S        PH   + +P+ + K+
Subjt:  TEVQAATTSATAEEKWNMTKMENSMLYFEMFSPHDFDHCAPNFDKKS

TrEMBL top hitse value%identityAlignment
A0A022RMR7 Uncharacterized protein (Fragment)4.2e-4389.89Show/hide
Query:  MGRAPCCDKASVKRGPWSPEEDAKLKHHIHNHGTGGNWISLPQKAGLKRCGKSCRLRWLNYLRPNIKHGGFTEDEDRIICSLFTTIGSR
        MGRAPCCDKA+VKRGPWSPEED KLK +IHNHGTGGNWISLPQK GLKRCGKSCRLRWLNYLRPNIKHGGFTEDED +ICSL+ TIGSR
Subjt:  MGRAPCCDKASVKRGPWSPEEDAKLKHHIHNHGTGGNWISLPQKAGLKRCGKSCRLRWLNYLRPNIKHGGFTEDEDRIICSLFTTIGSR

A0A4U6VQH2 Uncharacterized protein1.2e-4262.59Show/hide
Query:  MGRAPCCDKASVKRGPWSPEEDAKLKHHIHNHGTGGNWISLPQKAGLKRCGKSCRLRWLNYLRPNIKHGGFTEDEDRIICSLFTTIGSRRP--DAALPTE
        MGRAPCCDKA+VK+GPWSPEED KLK +IH HGTGGNWI+LP KAGLKRCGKSCRLRWLNYLRPNIKHG F++DEDRIIC+LF TIGSR     A LP  
Subjt:  MGRAPCCDKASVKRGPWSPEEDAKLKHHIHNHGTGGNWISLPQKAGLKRCGKSCRLRWLNYLRPNIKHGGFTEDEDRIICSLFTTIGSRRP--DAALPTE

Query:  VQAATTSATAEEKWNMTKMENSMLY-FEMFSPHDFDHCA
             T    +  WN TK++  +++  + ++ H  +HC+
Subjt:  VQAATTSATAEEKWNMTKMENSMLY-FEMFSPHDFDHCA

A0A6J1GAF5 transcription factor MYB36-like2.2e-4461.33Show/hide
Query:  MGRAPCCDKASVKRGPWSPEEDAKLKHHIHNHGTGGNWISLPQKAGLKRCGKSCRLRWLNYLRPNIKHGGFTEDEDRIICSLFTTIGSRRPDAALPTEVQ
        MGR+PCCDKA+VK+GPWSPEEDAKLK +IHNHGTGGNWISLPQKAGLKRCGKSCRLRWLNYLRPNIKHGGFTE+EDRIIC+LF+TIGSR   + + T++ 
Subjt:  MGRAPCCDKASVKRGPWSPEEDAKLKHHIHNHGTGGNWISLPQKAGLKRCGKSCRLRWLNYLRPNIKHGGFTEDEDRIICSLFTTIGSRRPDAALPTEVQ

Query:  AATTSATAEEKWNMTKMENSMLYFEM-----------FSPHDFDHCAPNF
          T +   +  WN +K++  ++  E            +S H  DH   +F
Subjt:  AATTSATAEEKWNMTKMENSMLYFEM-----------FSPHDFDHCAPNF

A0A6J1K990 transcription factor MYB36-like1.7e-4461.74Show/hide
Query:  MGRAPCCDKASVKRGPWSPEEDAKLKHHIHNHGTGGNWISLPQKAGLKRCGKSCRLRWLNYLRPNIKHGGFTEDEDRIICSLFTTIGSRRPDAALPTEVQ
        MGR+PCCDKA+VK+GPWSPEEDAKLK +IHNHGTGGNWISLPQKAGLKRCGKSCRLRWLNYLRPNIKHGGFTE+EDRIIC+LF+TIGSR   + + T++ 
Subjt:  MGRAPCCDKASVKRGPWSPEEDAKLKHHIHNHGTGGNWISLPQKAGLKRCGKSCRLRWLNYLRPNIKHGGFTEDEDRIICSLFTTIGSRRPDAALPTEVQ

Query:  AATTSATAEEKWNMTKMENSMLYFEM----------FSPHDFDHCAPNF
          T +   +  WN +K++  ++  E           +S H  DH   +F
Subjt:  AATTSATAEEKWNMTKMENSMLYFEM----------FSPHDFDHCAPNF

K3ZVB3 Uncharacterized protein1.2e-4262.59Show/hide
Query:  MGRAPCCDKASVKRGPWSPEEDAKLKHHIHNHGTGGNWISLPQKAGLKRCGKSCRLRWLNYLRPNIKHGGFTEDEDRIICSLFTTIGSRRP--DAALPTE
        MGRAPCCDKA+VK+GPWSPEED KLK +IH HGTGGNWI+LP KAGLKRCGKSCRLRWLNYLRPNIKHG F++DEDRIIC+LF TIGSR     A LP  
Subjt:  MGRAPCCDKASVKRGPWSPEEDAKLKHHIHNHGTGGNWISLPQKAGLKRCGKSCRLRWLNYLRPNIKHGGFTEDEDRIICSLFTTIGSRRP--DAALPTE

Query:  VQAATTSATAEEKWNMTKMENSMLY-FEMFSPHDFDHCA
             T    +  WN TK++  +++  + ++ H  +HC+
Subjt:  VQAATTSATAEEKWNMTKMENSMLY-FEMFSPHDFDHCA

SwissProt top hitse value%identityAlignment
F4JSU0 Transcription factor MYB875.5e-4078.65Show/hide
Query:  MGRAPCCDKASVKRGPWSPEEDAKLKHHIHNHGTGGNWISLPQKAGLKRCGKSCRLRWLNYLRPNIKHGGFTEDEDRIICSLFTTIGSR
        MGRAPCCDK +VK+GPWS EEDA LK +I  HGTG NWISLPQ+ G+KRCGKSCRLRWLNYLRPN+KHGGFT++ED IICSL+ TIGSR
Subjt:  MGRAPCCDKASVKRGPWSPEEDAKLKHHIHNHGTGGNWISLPQKAGLKRCGKSCRLRWLNYLRPNIKHGGFTEDEDRIICSLFTTIGSR

Q9FG68 Transcription factor RAX14.7e-3978.65Show/hide
Query:  MGRAPCCDKASVKRGPWSPEEDAKLKHHIHNHGTGGNWISLPQKAGLKRCGKSCRLRWLNYLRPNIKHGGFTEDEDRIICSLFTTIGSR
        MGRAPCCDK  VKRGPWSPEED+KL+ +I  +G GGNWIS P KAGL+RCGKSCRLRWLNYLRPNIKHG F+E+EDRII SLF  IGSR
Subjt:  MGRAPCCDKASVKRGPWSPEEDAKLKHHIHNHGTGGNWISLPQKAGLKRCGKSCRLRWLNYLRPNIKHGGFTEDEDRIICSLFTTIGSR

Q9FKL2 Transcription factor MYB365.0e-4166.13Show/hide
Query:  MGRAPCCDKASVKRGPWSPEEDAKLKHHIHNHGTGGNWISLPQKAGLKRCGKSCRLRWLNYLRPNIKHGGFTEDEDRIICSLFTTIGSRRP--DAALPTE
        MGRAPCCDKA+VK+GPWSPEED KLK +I  +GTGGNWI+LPQK GLKRCGKSCRLRWLNYLRPNIKHGGF+E+EDRII SL+ +IGSR     A LP  
Subjt:  MGRAPCCDKASVKRGPWSPEEDAKLKHHIHNHGTGGNWISLPQKAGLKRCGKSCRLRWLNYLRPNIKHGGFTEDEDRIICSLFTTIGSRRP--DAALPTE

Query:  VQAATTSATAEEKWNMTKMENSML
             T    +  WN TK++  +L
Subjt:  VQAATTSATAEEKWNMTKMENSML

Q9M2Y9 Transcription factor RAX39.1e-4384.27Show/hide
Query:  MGRAPCCDKASVKRGPWSPEEDAKLKHHIHNHGTGGNWISLPQKAGLKRCGKSCRLRWLNYLRPNIKHGGFTEDEDRIICSLFTTIGSR
        MGRAPCCDKA+VK+GPWSPEEDAKLK +I N GTGGNWI+LPQK GLKRCGKSCRLRWLNYLRPNIKHGGF+E+E+ IICSL+ TIGSR
Subjt:  MGRAPCCDKASVKRGPWSPEEDAKLKHHIHNHGTGGNWISLPQKAGLKRCGKSCRLRWLNYLRPNIKHGGFTEDEDRIICSLFTTIGSR

Q9SJL7 Transcription factor RAX28.5e-4162.31Show/hide
Query:  MGRAPCCDKASVKRGPWSPEEDAKLKHHIHNHGTGGNWISLPQKAGLKRCGKSCRLRWLNYLRPNIKHGGFTEDEDRIICSLFTTIGSRRPDAALPTEVQ
        MGRAPCCDKA+VKRGPWSPEEDAKLK +I   GTGGNWI+LP KAGL+RCGKSCRLRWLNYLRPNI+HG FTE+ED II SLF +IGSR   + +   +Q
Subjt:  MGRAPCCDKASVKRGPWSPEEDAKLKHHIHNHGTGGNWISLPQKAGLKRCGKSCRLRWLNYLRPNIKHGGFTEDEDRIICSLFTTIGSRRPDAALPTEVQ

Query:  AATTSATAEEKWNMTKMENSMLYFEMFSPH
          T +   +  WN TK++  ++      PH
Subjt:  AATTSATAEEKWNMTKMENSMLYFEMFSPH

Arabidopsis top hitse value%identityAlignment
AT2G36890.1 Duplicated homeodomain-like superfamily protein6.1e-4262.31Show/hide
Query:  MGRAPCCDKASVKRGPWSPEEDAKLKHHIHNHGTGGNWISLPQKAGLKRCGKSCRLRWLNYLRPNIKHGGFTEDEDRIICSLFTTIGSRRPDAALPTEVQ
        MGRAPCCDKA+VKRGPWSPEEDAKLK +I   GTGGNWI+LP KAGL+RCGKSCRLRWLNYLRPNI+HG FTE+ED II SLF +IGSR   + +   +Q
Subjt:  MGRAPCCDKASVKRGPWSPEEDAKLKHHIHNHGTGGNWISLPQKAGLKRCGKSCRLRWLNYLRPNIKHGGFTEDEDRIICSLFTTIGSRRPDAALPTEVQ

Query:  AATTSATAEEKWNMTKMENSMLYFEMFSPH
          T +   +  WN TK++  ++      PH
Subjt:  AATTSATAEEKWNMTKMENSMLYFEMFSPH

AT3G49690.1 myb domain protein 846.5e-4484.27Show/hide
Query:  MGRAPCCDKASVKRGPWSPEEDAKLKHHIHNHGTGGNWISLPQKAGLKRCGKSCRLRWLNYLRPNIKHGGFTEDEDRIICSLFTTIGSR
        MGRAPCCDKA+VK+GPWSPEEDAKLK +I N GTGGNWI+LPQK GLKRCGKSCRLRWLNYLRPNIKHGGF+E+E+ IICSL+ TIGSR
Subjt:  MGRAPCCDKASVKRGPWSPEEDAKLKHHIHNHGTGGNWISLPQKAGLKRCGKSCRLRWLNYLRPNIKHGGFTEDEDRIICSLFTTIGSR

AT4G37780.1 myb domain protein 873.9e-4178.65Show/hide
Query:  MGRAPCCDKASVKRGPWSPEEDAKLKHHIHNHGTGGNWISLPQKAGLKRCGKSCRLRWLNYLRPNIKHGGFTEDEDRIICSLFTTIGSR
        MGRAPCCDK +VK+GPWS EEDA LK +I  HGTG NWISLPQ+ G+KRCGKSCRLRWLNYLRPN+KHGGFT++ED IICSL+ TIGSR
Subjt:  MGRAPCCDKASVKRGPWSPEEDAKLKHHIHNHGTGGNWISLPQKAGLKRCGKSCRLRWLNYLRPNIKHGGFTEDEDRIICSLFTTIGSR

AT5G57620.1 myb domain protein 363.5e-4266.13Show/hide
Query:  MGRAPCCDKASVKRGPWSPEEDAKLKHHIHNHGTGGNWISLPQKAGLKRCGKSCRLRWLNYLRPNIKHGGFTEDEDRIICSLFTTIGSRRP--DAALPTE
        MGRAPCCDKA+VK+GPWSPEED KLK +I  +GTGGNWI+LPQK GLKRCGKSCRLRWLNYLRPNIKHGGF+E+EDRII SL+ +IGSR     A LP  
Subjt:  MGRAPCCDKASVKRGPWSPEEDAKLKHHIHNHGTGGNWISLPQKAGLKRCGKSCRLRWLNYLRPNIKHGGFTEDEDRIICSLFTTIGSRRP--DAALPTE

Query:  VQAATTSATAEEKWNMTKMENSML
             T    +  WN TK++  +L
Subjt:  VQAATTSATAEEKWNMTKMENSML

AT5G65790.1 myb domain protein 688.4e-4483.15Show/hide
Query:  MGRAPCCDKASVKRGPWSPEEDAKLKHHIHNHGTGGNWISLPQKAGLKRCGKSCRLRWLNYLRPNIKHGGFTEDEDRIICSLFTTIGSR
        MGRAPCCDKA+VK+GPWSPEEDAKLK +I N GTGGNWI+LPQK GL+RCGKSCRLRWLNYLRPNIKHGGF+E+ED IIC+L+ TIGSR
Subjt:  MGRAPCCDKASVKRGPWSPEEDAKLKHHIHNHGTGGNWISLPQKAGLKRCGKSCRLRWLNYLRPNIKHGGFTEDEDRIICSLFTTIGSR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAGAGCTCCATGTTGTGACAAGGCAAGTGTGAAGAGAGGGCCTTGGTCACCTGAAGAAGATGCAAAGCTCAAACACCATATTCACAACCATGGAACTGGTGGCAA
TTGGATTTCCCTCCCTCAAAAAGCTGGACTTAAGCGATGTGGGAAAAGTTGCAGATTGAGATGGCTTAATTATCTGAGACCAAATATTAAACATGGCGGTTTCACTGAAG
ATGAAGATCGAATTATTTGCTCCCTCTTCACCACCATAGGAAGCAGGCGGCCGGATGCAGCTCTTCCGACGGAAGTTCAGGCGGCAACCACCTCAGCTACGGCGGAGGAG
AAATGGAATATGACCAAAATGGAAAATTCCATGTTGTATTTTGAAATGTTTTCTCCACATGATTTTGACCATTGTGCCCCTAATTTCGATAAAAAGAGTAATTTTAGGGC
AATCTTTGTATTGACATTCAATGTTGGATGGTACTTTGCATGCCCATCCCAGCAGCTAGGTCGGCGTCCAATTGCGTGTGTGGTGCAGGACCCGTCATTAGTTTTACCCT
GCAACATTGTCGTCGTTGTGGATCAGGAACATTGTTAA
mRNA sequenceShow/hide mRNA sequence
CTTCCTTGTATGAAAAATAGAGAGAGATCATAATCATAATCATAATCATAAATTAAGGTTATGGGAAGAGCTCCATGTTGTGACAAGGCAAGTGTGAAGAGAGGGCCTTG
GTCACCTGAAGAAGATGCAAAGCTCAAACACCATATTCACAACCATGGAACTGGTGGCAATTGGATTTCCCTCCCTCAAAAAGCTGGACTTAAGCGATGTGGGAAAAGTT
GCAGATTGAGATGGCTTAATTATCTGAGACCAAATATTAAACATGGCGGTTTCACTGAAGATGAAGATCGAATTATTTGCTCCCTCTTCACCACCATAGGAAGCAGGCGG
CCGGATGCAGCTCTTCCGACGGAAGTTCAGGCGGCAACCACCTCAGCTACGGCGGAGGAGAAATGGAATATGACCAAAATGGAAAATTCCATGTTGTATTTTGAAATGTT
TTCTCCACATGATTTTGACCATTGTGCCCCTAATTTCGATAAAAAGAGTAATTTTAGGGCAATCTTTGTATTGACATTCAATGTTGGATGGTACTTTGCATGCCCATCCC
AGCAGCTAGGTCGGCGTCCAATTGCGTGTGTGGTGCAGGACCCGTCATTAGTTTTACCCTGCAACATTGTCGTCGTTGTGGATCAGGAACATTGTTAA
Protein sequenceShow/hide protein sequence
MGRAPCCDKASVKRGPWSPEEDAKLKHHIHNHGTGGNWISLPQKAGLKRCGKSCRLRWLNYLRPNIKHGGFTEDEDRIICSLFTTIGSRRPDAALPTEVQAATTSATAEE
KWNMTKMENSMLYFEMFSPHDFDHCAPNFDKKSNFRAIFVLTFNVGWYFACPSQQLGRRPIACVVQDPSLVLPCNIVVVVDQEHC