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Lsi01G013100 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G013100
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionSAUR-like auxin-responsive protein family
Genome locationchr01:11376087..11376464
RNA-Seq ExpressionLsi01G013100
SyntenyLsi01G013100
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063814.1 auxin-responsive protein SAUR40-like [Cucumis melo var. makuwa]2.0e-5693.6Show/hide
Query:  MMLRLFTALLQKSLSPLLSKEPKPESFDEEFEAAVTVPKDVEEGHFVVFAVDGDERRRFVINLEFLSNPEFLRLLELAKEEYGFQQKGALTVPCRPEELQ
        M LRL  ALLQKSLSPLLSKEPKPESF EEFEAA TVPKDVEEGHFVVFAVDGDER+RFVINLEFLSNPEFLRLLELAKEEYGFQQKGALTVPCRPEELQ
Subjt:  MMLRLFTALLQKSLSPLLSKEPKPESFDEEFEAAVTVPKDVEEGHFVVFAVDGDERRRFVINLEFLSNPEFLRLLELAKEEYGFQQKGALTVPCRPEELQ

Query:  KIVEERRKQKNGEWIASSVHIITSY
        KIVEERRKQK+GEWIASSVHIITS+
Subjt:  KIVEERRKQKNGEWIASSVHIITSY

KAG6604402.1 Auxin-responsive protein SAUR72, partial [Cucurbita argyrosperma subsp. sororia]6.0e-5387.2Show/hide
Query:  MMLRLFTALLQKSLSPLLSKEPKPESFDEEFEAAVTVPKDVEEGHFVVFAVDGDERRRFVINLEFLSNPEFLRLLELAKEEYGFQQKGALTVPCRPEELQ
        M LRLF ++LQKSLSPL+SKEPK +SFDEEF+AAV VPKDVEEGHFVVFA DGDER+RFVINL+FLSNP FLRLLELAKEEYGFQQKGALTVPC PEELQ
Subjt:  MMLRLFTALLQKSLSPLLSKEPKPESFDEEFEAAVTVPKDVEEGHFVVFAVDGDERRRFVINLEFLSNPEFLRLLELAKEEYGFQQKGALTVPCRPEELQ

Query:  KIVEERRKQKNGEWIASSVHIITSY
        KIVEERRKQK GEWIASSVHIIT Y
Subjt:  KIVEERRKQKNGEWIASSVHIITSY

XP_023543955.1 uncharacterized protein LOC111803675 [Cucurbita pepo subsp. pepo]6.0e-5387.2Show/hide
Query:  MMLRLFTALLQKSLSPLLSKEPKPESFDEEFEAAVTVPKDVEEGHFVVFAVDGDERRRFVINLEFLSNPEFLRLLELAKEEYGFQQKGALTVPCRPEELQ
        M LRLF ++LQKSLSPL+SKEPK +SFDEEF+AAV VPKDVEEGHFVVFA DGDER+RFVINL+FLSNP FLRLLELAKEEYGFQQKGALTVPC PEELQ
Subjt:  MMLRLFTALLQKSLSPLLSKEPKPESFDEEFEAAVTVPKDVEEGHFVVFAVDGDERRRFVINLEFLSNPEFLRLLELAKEEYGFQQKGALTVPCRPEELQ

Query:  KIVEERRKQKNGEWIASSVHIITSY
        KIVEERRKQK GEWIASSVHIIT Y
Subjt:  KIVEERRKQKNGEWIASSVHIITSY

XP_031742896.1 auxin-induced protein 10A5-like [Cucumis sativus]1.1e-5492Show/hide
Query:  MMLRLFTALLQKSLSPLLSKEPKPESFDEEFEAAVTVPKDVEEGHFVVFAVDGDERRRFVINLEFLSNPEFLRLLELAKEEYGFQQKGALTVPCRPEELQ
        M LRL  ALLQKSLSPLLSKE + ESF EEFEAA TVPKDVEEGHFVVFAVDGDER+RFVINLEFLSNPEFLRLLELAKEEYGFQQKGALTVPCRPEELQ
Subjt:  MMLRLFTALLQKSLSPLLSKEPKPESFDEEFEAAVTVPKDVEEGHFVVFAVDGDERRRFVINLEFLSNPEFLRLLELAKEEYGFQQKGALTVPCRPEELQ

Query:  KIVEERRKQKNGEWIASSVHIITSY
        KIVEERRKQKNGEWIASSVHIITS+
Subjt:  KIVEERRKQKNGEWIASSVHIITSY

XP_038881209.1 auxin-responsive protein SAUR71-like [Benincasa hispida]1.8e-5794.4Show/hide
Query:  MMLRLFTALLQKSLSPLLSKEPKPESFDEEFEAAVTVPKDVEEGHFVVFAVDGDERRRFVINLEFLSNPEFLRLLELAKEEYGFQQKGALTVPCRPEELQ
        MML+LF ALLQKSLSPLLSKE KPESFDEEFEAA+TVPKDVEEGHFVVFAVDGDER+RFVINLEFLSNPEFLRLLELAKEEYGFQQKGALTVPC PEELQ
Subjt:  MMLRLFTALLQKSLSPLLSKEPKPESFDEEFEAAVTVPKDVEEGHFVVFAVDGDERRRFVINLEFLSNPEFLRLLELAKEEYGFQQKGALTVPCRPEELQ

Query:  KIVEERRKQKNGEWIASSVHIITSY
        KIVEERRKQK+GEWIASSVHIITSY
Subjt:  KIVEERRKQKNGEWIASSVHIITSY

TrEMBL top hitse value%identityAlignment
A0A0A0KEQ9 Uncharacterized protein5.3e-5592Show/hide
Query:  MMLRLFTALLQKSLSPLLSKEPKPESFDEEFEAAVTVPKDVEEGHFVVFAVDGDERRRFVINLEFLSNPEFLRLLELAKEEYGFQQKGALTVPCRPEELQ
        M LRL  ALLQKSLSPLLSKE + ESF EEFEAA TVPKDVEEGHFVVFAVDGDER+RFVINLEFLSNPEFLRLLELAKEEYGFQQKGALTVPCRPEELQ
Subjt:  MMLRLFTALLQKSLSPLLSKEPKPESFDEEFEAAVTVPKDVEEGHFVVFAVDGDERRRFVINLEFLSNPEFLRLLELAKEEYGFQQKGALTVPCRPEELQ

Query:  KIVEERRKQKNGEWIASSVHIITSY
        KIVEERRKQKNGEWIASSVHIITS+
Subjt:  KIVEERRKQKNGEWIASSVHIITSY

A0A498ICP9 Uncharacterized protein2.1e-2760.68Show/hide
Query:  MMLRLFTA-LLQKSLSPLLSK-----EPKPESFDEEFEAAVTVPKDVEEGHFVVFAVDGDERRRFVINLEFLSNPEFLRLLELAKEEYGFQQKGALTVPC
        MMLRL    L+ K LS L S+      P+   FDE+ E A  VPKDV+EGHF VFAV G+E  RFV+ LE LSNPEFLRLLE AKEEYGF+QKGAL +PC
Subjt:  MMLRLFTA-LLQKSLSPLLSK-----EPKPESFDEEFEAAVTVPKDVEEGHFVVFAVDGDERRRFVINLEFLSNPEFLRLLELAKEEYGFQQKGALTVPC

Query:  RPEELQKIVEERRKQKN
        RP+ELQKI++  R++K+
Subjt:  RPEELQKIVEERRKQKN

A0A5A7V9B1 Auxin-responsive protein SAUR40-like9.6e-5793.6Show/hide
Query:  MMLRLFTALLQKSLSPLLSKEPKPESFDEEFEAAVTVPKDVEEGHFVVFAVDGDERRRFVINLEFLSNPEFLRLLELAKEEYGFQQKGALTVPCRPEELQ
        M LRL  ALLQKSLSPLLSKEPKPESF EEFEAA TVPKDVEEGHFVVFAVDGDER+RFVINLEFLSNPEFLRLLELAKEEYGFQQKGALTVPCRPEELQ
Subjt:  MMLRLFTALLQKSLSPLLSKEPKPESFDEEFEAAVTVPKDVEEGHFVVFAVDGDERRRFVINLEFLSNPEFLRLLELAKEEYGFQQKGALTVPCRPEELQ

Query:  KIVEERRKQKNGEWIASSVHIITSY
        KIVEERRKQK+GEWIASSVHIITS+
Subjt:  KIVEERRKQKNGEWIASSVHIITSY

A0A6J1EC89 uncharacterized protein LOC1114330023.2e-5286.4Show/hide
Query:  MMLRLFTALLQKSLSPLLSKEPKPESFDEEFEAAVTVPKDVEEGHFVVFAVDGDERRRFVINLEFLSNPEFLRLLELAKEEYGFQQKGALTVPCRPEELQ
        M LRLF ++LQKSLSPL+SKEPK +SFDEEF AAV VPKDVEEGHFVVFA DGDER+RFVINL+FLSNP FLRLLELAKEEYGFQQKGALTVPC PEELQ
Subjt:  MMLRLFTALLQKSLSPLLSKEPKPESFDEEFEAAVTVPKDVEEGHFVVFAVDGDERRRFVINLEFLSNPEFLRLLELAKEEYGFQQKGALTVPCRPEELQ

Query:  KIVEERRKQKNGEWIASSVHIITSY
        KIVEERRKQK G WIASSVHIIT Y
Subjt:  KIVEERRKQKNGEWIASSVHIITSY

A0A6J1IPG4 uncharacterized protein LOC1114776312.9e-5387.2Show/hide
Query:  MMLRLFTALLQKSLSPLLSKEPKPESFDEEFEAAVTVPKDVEEGHFVVFAVDGDERRRFVINLEFLSNPEFLRLLELAKEEYGFQQKGALTVPCRPEELQ
        M LRLF ++LQKSLSPL+SKEPK +SFDEEF+AAV VPKDVEEGHFVVFA DGDER+RFVINL+FLSNP FLRLLELAKEEYGFQQKGALTVPC PEELQ
Subjt:  MMLRLFTALLQKSLSPLLSKEPKPESFDEEFEAAVTVPKDVEEGHFVVFAVDGDERRRFVINLEFLSNPEFLRLLELAKEEYGFQQKGALTVPCRPEELQ

Query:  KIVEERRKQKNGEWIASSVHIITSY
        KIVEERRKQK GEWIASSVHIIT Y
Subjt:  KIVEERRKQKNGEWIASSVHIITSY

SwissProt top hitse value%identityAlignment
O64538 Auxin-responsive protein SAUR401.8e-0738.89Show/hide
Query:  TVPKDVEEGHFVVFAVDGDERRRFVINLEFLSNPEFLRLLELAKEEYGFQQKGALTVPCRPEELQKIVEERR
        TV   V  GH  V    G+++ RFV++ E L++P F+ LL  + +EYG+ QKG L +PC     +++VE  R
Subjt:  TVPKDVEEGHFVVFAVDGDERRRFVINLEFLSNPEFLRLLELAKEEYGFQQKGALTVPCRPEELQKIVEERR

O65695 Auxin-responsive protein SAUR504.7e-0838.2Show/hide
Query:  TALLQKSLSPLLSKEPK-PESFDEEFEAAVTVPKDVEEGHFVVFAVDGDERRRFVINLEFLSNPEFLRLLELAKEEYGFQQKGALTVPC
        TA+L++ L    S   K    +DE+      +P DV +GHF V+   G+ R R+++ + FL++PEF  LL+ A+EE+GF     LT+PC
Subjt:  TALLQKSLSPLLSKEPK-PESFDEEFEAAVTVPKDVEEGHFVVFAVDGDERRRFVINLEFLSNPEFLRLLELAKEEYGFQQKGALTVPC

Q9LTV3 Auxin-responsive protein SAUR722.1e-0837.37Show/hide
Query:  SPLLSKEPKPESFDEEF-EAAVT-----VPKDVEEGHFVVFAVDGDERRRFVINLEFLSNPEFLRLLELAKEEYGFQQKGALTVPCRPEELQKIVEERR
        S L S   +P    E F  ++VT         V EGH  V+   GDE  RFV++ E L++P F+ LL  + +EYG++QKG L +PC     ++I+E  R
Subjt:  SPLLSKEPKPESFDEEF-EAAVT-----VPKDVEEGHFVVFAVDGDERRRFVINLEFLSNPEFLRLLELAKEEYGFQQKGALTVPCRPEELQKIVEERR

Q9SGU2 Auxin-responsive protein SAUR712.7e-0841.79Show/hide
Query:  VEEGHFVVFAVDGDERRRFVINLEFLSNPEFLRLLELAKEEYGFQQKGALTVPCRPEELQKIVEERR
        V EGH  V+   G E  RFV+N E L++P F+ LL+ + +EYG++Q+G L +PC     ++I+E  R
Subjt:  VEEGHFVVFAVDGDERRRFVINLEFLSNPEFLRLLELAKEEYGFQQKGALTVPCRPEELQKIVEERR

Q9ZUZ3 Auxin-responsive protein SAUR329.4e-0935.87Show/hide
Query:  ESFDEEFEAAVTVPKDVEEGHFVV-FAVDGDERRRFVINLEFLSNPEFLRLLELAKEEYGFQQKGALTVPCRPEE---LQKIVEERRKQKNG
        +SF    + +V V KDV +G   +     G+E++RF++ + + ++P F++LL+ A++EYGF QKG +T+PC  EE   +Q +++  R   NG
Subjt:  ESFDEEFEAAVTVPKDVEEGHFVV-FAVDGDERRRFVINLEFLSNPEFLRLLELAKEEYGFQQKGALTVPCRPEE---LQKIVEERRKQKNG

Arabidopsis top hitse value%identityAlignment
AT2G28085.1 SAUR-like auxin-responsive protein family1.5e-1751.11Show/hide
Query:  SKEPKPESFDEEFEAAVTVPKDVEEGHFVVFAVDG--DERRRFVINLEFLSNPEFLRLLELAKEEYGFQQKGALTVPCRPEELQKIVEER
        +K+P PE +  +      VPKDV+EGHF V AVDG  +  +RFV+ L FL +P F +LLE A+EEYGF   GAL VPCRP  L+ I+ E+
Subjt:  SKEPKPESFDEEFEAAVTVPKDVEEGHFVVFAVDG--DERRRFVINLEFLSNPEFLRLLELAKEEYGFQQKGALTVPCRPEELQKIVEER

AT3G09870.1 SAUR-like auxin-responsive protein family7.6e-2257.32Show/hide
Query:  FDEEFEAAVTVPKDVEEGHFVVFAVDGDERRRFVINLEFLSNPEFLRLLELAKEEYGFQQKGALTVPCRPEELQKIVEERRK
        F+EE  AA  +P DV+EGH  V AV G+  +RFV+ LE L+ PEFLRLLE A+EE+GFQ +G LT+PC+PEE+QKI++  R+
Subjt:  FDEEFEAAVTVPKDVEEGHFVVFAVDGDERRRFVINLEFLSNPEFLRLLELAKEEYGFQQKGALTVPCRPEELQKIVEERRK

AT4G38860.1 SAUR-like auxin-responsive protein family1.8e-1041.57Show/hide
Query:  TALLQKSLSPLLSKEPKPESFDEEFEAAVTVPKDVEEGHFVVFAVDGDERRRFVINLEFLSNPEFLRLLELAKEEYGFQ-QKGALTVPC
        TA+L K +    S   K + +DEE      +P DV +GHF V+   G++R R+++ + FL++PEFL LL+ A+EE+GF+   G LT+PC
Subjt:  TALLQKSLSPLLSKEPKPESFDEEFEAAVTVPKDVEEGHFVVFAVDGDERRRFVINLEFLSNPEFLRLLELAKEEYGFQ-QKGALTVPC

AT5G20810.1 SAUR-like auxin-responsive protein family3.9e-1039.36Show/hide
Query:  LSPLLSK---EPKPESFDEEFEAAVTVPKDVEEGHFVVFAVDGDERRRFVINLEFLSNPEFLRLLELAKEEYGFQQKGALTVPCRPEELQKIVE
        +SP ++K   + K    DEE   +   P DV +G+  V+   G E RRF+I   +LS+  F  LLE A+EE+GF Q GALT+PC  E  + +++
Subjt:  LSPLLSK---EPKPESFDEEFEAAVTVPKDVEEGHFVVFAVDGDERRRFVINLEFLSNPEFLRLLELAKEEYGFQQKGALTVPCRPEELQKIVE

AT5G20810.2 SAUR-like auxin-responsive protein family3.9e-1039.36Show/hide
Query:  LSPLLSK---EPKPESFDEEFEAAVTVPKDVEEGHFVVFAVDGDERRRFVINLEFLSNPEFLRLLELAKEEYGFQQKGALTVPCRPEELQKIVE
        +SP ++K   + K    DEE   +   P DV +G+  V+   G E RRF+I   +LS+  F  LLE A+EE+GF Q GALT+PC  E  + +++
Subjt:  LSPLLSK---EPKPESFDEEFEAAVTVPKDVEEGHFVVFAVDGDERRRFVINLEFLSNPEFLRLLELAKEEYGFQQKGALTVPCRPEELQKIVE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGCTAAGGTTATTCACCGCTCTCCTCCAAAAGAGCCTCTCTCCACTGCTATCTAAAGAACCTAAACCTGAAAGTTTTGACGAAGAATTCGAAGCAGCAGTTACGGT
ACCAAAAGACGTGGAAGAAGGCCATTTTGTGGTATTTGCAGTGGATGGTGATGAGAGAAGGAGGTTTGTCATTAATTTAGAGTTCCTGTCTAACCCTGAATTCTTAAGGC
TATTGGAGCTGGCAAAGGAAGAATATGGATTCCAACAAAAGGGAGCTCTAACAGTCCCTTGTCGGCCTGAGGAACTACAGAAGATTGTAGAAGAAAGAAGAAAACAGAAA
AACGGGGAGTGGATTGCATCTAGTGTTCATATCATAACTAGCTATTAG
mRNA sequenceShow/hide mRNA sequence
ATGATGCTAAGGTTATTCACCGCTCTCCTCCAAAAGAGCCTCTCTCCACTGCTATCTAAAGAACCTAAACCTGAAAGTTTTGACGAAGAATTCGAAGCAGCAGTTACGGT
ACCAAAAGACGTGGAAGAAGGCCATTTTGTGGTATTTGCAGTGGATGGTGATGAGAGAAGGAGGTTTGTCATTAATTTAGAGTTCCTGTCTAACCCTGAATTCTTAAGGC
TATTGGAGCTGGCAAAGGAAGAATATGGATTCCAACAAAAGGGAGCTCTAACAGTCCCTTGTCGGCCTGAGGAACTACAGAAGATTGTAGAAGAAAGAAGAAAACAGAAA
AACGGGGAGTGGATTGCATCTAGTGTTCATATCATAACTAGCTATTAG
Protein sequenceShow/hide protein sequence
MMLRLFTALLQKSLSPLLSKEPKPESFDEEFEAAVTVPKDVEEGHFVVFAVDGDERRRFVINLEFLSNPEFLRLLELAKEEYGFQQKGALTVPCRPEELQKIVEERRKQK
NGEWIASSVHIITSY