| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0063818.1 RNA polymerase sigma factor sigF [Cucumis melo var. makuwa] | 3.3e-251 | 72.36 | Show/hide |
Query: VSMFHEQVTPARYFSTSFLSQEQHHECRPQSQILKDDITSQMTLDRRLIERSVSIDESSQSDHDHLVWELKHQAVEWPGLLSSWPSLQMEEYKISSVERQ
V MF EQ +PARYFSTSFLSQEQHHECRPQSQILKDD TSQMTLDRRLIERSV IDE S+SDHDHL+WELKHQAVEWP LLSSWPSLQMEEYKISS E++
Subjt: VSMFHEQVTPARYFSTSFLSQEQHHECRPQSQILKDDITSQMTLDRRLIERSVSIDESSQSDHDHLVWELKHQAVEWPGLLSSWPSLQMEEYKISSVERQ
Query: SYSASGELLVKDEPENVISLAKKALSASKQAALLVDESELVGTNLDYTSRDDSLSKEGRTVKSTRLQDRRSKKRKVPKHVTTIHETSILKGKDSRRKTSE
SY+A GE+LVKDEPENVI+LAKKALSASKQAALLVDESELVGT+LDY+S DDSLSKEGRTV+STRLQ+RRSKKRKVPKHVTTIHETS +GKDSRRKTSE
Subjt: SYSASGELLVKDEPENVISLAKKALSASKQAALLVDESELVGTNLDYTSRDDSLSKEGRTVKSTRLQDRRSKKRKVPKHVTTIHETSILKGKDSRRKTSE
Query: NFDPNDPLRLFLWGPETKKLLTAQEESELIVQIQDLMILDNVKARLQSQFGREPTLVEWAEALGLTCQCLQSQLHSFRISREKLINANLRMVVHIAKQYQ
FDPNDPLRLFLWGPETKKLLTAQEES+LIVQIQDLMILDNVKA+LQSQFGREPTLVEWAEALG+TCQ LQSQLHSFR SREKLINANLRMVVHIAKQY
Subjt: NFDPNDPLRLFLWGPETKKLLTAQEESELIVQIQDLMILDNVKARLQSQFGREPTLVEWAEALGLTCQCLQSQLHSFRISREKLINANLRMVVHIAKQYQ
Query: GRGLSLHDLLQATGHMHTEQSAKHAYSCGLLPKLECRALMTTSFVVQTHYPPHYTQSSSSQESYKPLNIELFVLRDWFRVQDSCFNEGSLGLMKSVEKFK
GRGLSLHDLLQ EGSLGLMKSVEKFK
Subjt: GRGLSLHDLLQATGHMHTEQSAKHAYSCGLLPKLECRALMTTSFVVQTHYPPHYTQSSSSQESYKPLNIELFVLRDWFRVQDSCFNEGSLGLMKSVEKFK
Query: PQAGCRFATYAYWWIRQSIRKAIFEHSRTIRLPENVYGLLGKVTEAKNYFVRAGNYKPSKEELAARVGITVERLDKLLFMSRIPRSLQQPVWADQDTTFQ
PQAGCRFA+YAYWWIR SI KAIF+HSRTIRLPENVY LLGKVTEAKNY VRAGNYKPSKEELAA VGITVERLDKL+FMSRIPRSLQQPVWADQDTT+Q
Subjt: PQAGCRFATYAYWWIRQSIRKAIFEHSRTIRLPENVYGLLGKVTEAKNYFVRAGNYKPSKEELAARVGITVERLDKLLFMSRIPRSLQQPVWADQDTTFQ
Query: DRKFNKDYYQKRENSTKIDLQVWYYFIAKFVKCWVTNEIHFITVIINKEAVLNAKENNDVRGRDHRDEITADSEVDTPDVSVERELMRRHIRNLLSILSP
EITADSEVDTPDVSVERELMRRHIRNLLSILSP
Subjt: DRKFNKDYYQKRENSTKIDLQVWYYFIAKFVKCWVTNEIHFITVIINKEAVLNAKENNDVRGRDHRDEITADSEVDTPDVSVERELMRRHIRNLLSILSP
Query: KERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAYADLLT
KERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAYADLLT
Subjt: KERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAYADLLT
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| TYK07306.1 RNA polymerase sigma factor sigF [Cucumis melo var. makuwa] | 5.7e-251 | 72.42 | Show/hide |
Query: MFHEQVTPARYFSTSFLSQEQHHECRPQSQILKDDITSQMTLDRRLIERSVSIDESSQSDHDHLVWELKHQAVEWPGLLSSWPSLQMEEYKISSVERQSY
MF EQ +PARYFSTSFLSQEQHHECRPQSQILKDD TSQMTLDRRLIERSV IDE S+SDHDHL+WELKHQAVEWP LLSSWPSLQMEEYKISS E++SY
Subjt: MFHEQVTPARYFSTSFLSQEQHHECRPQSQILKDDITSQMTLDRRLIERSVSIDESSQSDHDHLVWELKHQAVEWPGLLSSWPSLQMEEYKISSVERQSY
Query: SASGELLVKDEPENVISLAKKALSASKQAALLVDESELVGTNLDYTSRDDSLSKEGRTVKSTRLQDRRSKKRKVPKHVTTIHETSILKGKDSRRKTSENF
+A GE+LVKDEPENVI+LAKKALSASKQAALLVDESELVGT+LDY+S DDSLSKEGRTV+STRLQ+RRSKKRKVPKHVTTIHETS +GKDSRRKTSE F
Subjt: SASGELLVKDEPENVISLAKKALSASKQAALLVDESELVGTNLDYTSRDDSLSKEGRTVKSTRLQDRRSKKRKVPKHVTTIHETSILKGKDSRRKTSENF
Query: DPNDPLRLFLWGPETKKLLTAQEESELIVQIQDLMILDNVKARLQSQFGREPTLVEWAEALGLTCQCLQSQLHSFRISREKLINANLRMVVHIAKQYQGR
DPNDPLRLFLWGPETKKLLTAQEES+LIVQIQDLMILDNVKA+LQSQFGREPTLVEWAEALG+TCQ LQSQLHSFR SREKLINANLRMVVHIAKQY GR
Subjt: DPNDPLRLFLWGPETKKLLTAQEESELIVQIQDLMILDNVKARLQSQFGREPTLVEWAEALGLTCQCLQSQLHSFRISREKLINANLRMVVHIAKQYQGR
Query: GLSLHDLLQATGHMHTEQSAKHAYSCGLLPKLECRALMTTSFVVQTHYPPHYTQSSSSQESYKPLNIELFVLRDWFRVQDSCFNEGSLGLMKSVEKFKPQ
GLSLHDLLQ EGSLGLMKSVEKFKPQ
Subjt: GLSLHDLLQATGHMHTEQSAKHAYSCGLLPKLECRALMTTSFVVQTHYPPHYTQSSSSQESYKPLNIELFVLRDWFRVQDSCFNEGSLGLMKSVEKFKPQ
Query: AGCRFATYAYWWIRQSIRKAIFEHSRTIRLPENVYGLLGKVTEAKNYFVRAGNYKPSKEELAARVGITVERLDKLLFMSRIPRSLQQPVWADQDTTFQDR
AGCRFA+YAYWWIR SI KAIF+HSRTIRLPENVY LLGKVTEAKNY VRAGNYKPSKEELAA VGITVERLDKL+FMSRIPRSLQQPVWADQDTT+Q
Subjt: AGCRFATYAYWWIRQSIRKAIFEHSRTIRLPENVYGLLGKVTEAKNYFVRAGNYKPSKEELAARVGITVERLDKLLFMSRIPRSLQQPVWADQDTTFQDR
Query: KFNKDYYQKRENSTKIDLQVWYYFIAKFVKCWVTNEIHFITVIINKEAVLNAKENNDVRGRDHRDEITADSEVDTPDVSVERELMRRHIRNLLSILSPKE
EITADSEVDTPDVSVERELMRRHIRNLLSILSPKE
Subjt: KFNKDYYQKRENSTKIDLQVWYYFIAKFVKCWVTNEIHFITVIINKEAVLNAKENNDVRGRDHRDEITADSEVDTPDVSVERELMRRHIRNLLSILSPKE
Query: RRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAYADLLT
RRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAYADLLT
Subjt: RRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAYADLLT
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| XP_016902883.1 PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform X1 [Cucumis melo] | 1.1e-251 | 72.51 | Show/hide |
Query: VSMFHEQVTPARYFSTSFLSQEQHHECRPQSQILKDDITSQMTLDRRLIERSVSIDESSQSDHDHLVWELKHQAVEWPGLLSSWPSLQMEEYKISSVERQ
V MF EQ +PARYFSTSFLSQEQHHECRPQSQILKDD TSQMTLDRRLIERSV IDE S+SDHDHL+WELKHQAVEWP LLSSWPSLQMEEYKISS E++
Subjt: VSMFHEQVTPARYFSTSFLSQEQHHECRPQSQILKDDITSQMTLDRRLIERSVSIDESSQSDHDHLVWELKHQAVEWPGLLSSWPSLQMEEYKISSVERQ
Query: SYSASGELLVKDEPENVISLAKKALSASKQAALLVDESELVGTNLDYTSRDDSLSKEGRTVKSTRLQDRRSKKRKVPKHVTTIHETSILKGKDSRRKTSE
SY+A GE+LVKDEPENVI+LAKKALSASKQAALLVDESELVGT+LDY+S DDSLSKEGRTV+STRLQDRRSKKRKVPKHVTTIHETS +GKDSRRKTSE
Subjt: SYSASGELLVKDEPENVISLAKKALSASKQAALLVDESELVGTNLDYTSRDDSLSKEGRTVKSTRLQDRRSKKRKVPKHVTTIHETSILKGKDSRRKTSE
Query: NFDPNDPLRLFLWGPETKKLLTAQEESELIVQIQDLMILDNVKARLQSQFGREPTLVEWAEALGLTCQCLQSQLHSFRISREKLINANLRMVVHIAKQYQ
FDPNDPLRLFLWGPETKKLLTAQEES+LIVQIQDLMILDNVKA+LQSQFGREPTLVEWAEALG+TCQ LQSQLHSFR SREKLINANLRMVVHIAKQY
Subjt: NFDPNDPLRLFLWGPETKKLLTAQEESELIVQIQDLMILDNVKARLQSQFGREPTLVEWAEALGLTCQCLQSQLHSFRISREKLINANLRMVVHIAKQYQ
Query: GRGLSLHDLLQATGHMHTEQSAKHAYSCGLLPKLECRALMTTSFVVQTHYPPHYTQSSSSQESYKPLNIELFVLRDWFRVQDSCFNEGSLGLMKSVEKFK
GRGLSLHDLLQ EGSLGLMKSVEKFK
Subjt: GRGLSLHDLLQATGHMHTEQSAKHAYSCGLLPKLECRALMTTSFVVQTHYPPHYTQSSSSQESYKPLNIELFVLRDWFRVQDSCFNEGSLGLMKSVEKFK
Query: PQAGCRFATYAYWWIRQSIRKAIFEHSRTIRLPENVYGLLGKVTEAKNYFVRAGNYKPSKEELAARVGITVERLDKLLFMSRIPRSLQQPVWADQDTTFQ
PQAGCRFA+YAYWWIR SI KAIF+HSRTIRLPENVY LLGKVTEAKNY VRAGNYKPSKEELAA VGITVERLDKL+FMSRIPRSLQQPVWADQDTT+Q
Subjt: PQAGCRFATYAYWWIRQSIRKAIFEHSRTIRLPENVYGLLGKVTEAKNYFVRAGNYKPSKEELAARVGITVERLDKLLFMSRIPRSLQQPVWADQDTTFQ
Query: DRKFNKDYYQKRENSTKIDLQVWYYFIAKFVKCWVTNEIHFITVIINKEAVLNAKENNDVRGRDHRDEITADSEVDTPDVSVERELMRRHIRNLLSILSP
EITADSEVDTPDVSVERELMRRHIRNLLSILSP
Subjt: DRKFNKDYYQKRENSTKIDLQVWYYFIAKFVKCWVTNEIHFITVIINKEAVLNAKENNDVRGRDHRDEITADSEVDTPDVSVERELMRRHIRNLLSILSP
Query: KERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAYADLLT
KERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAYADLLT
Subjt: KERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAYADLLT
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| XP_016902885.1 PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform X2 [Cucumis melo] | 1.1e-251 | 72.51 | Show/hide |
Query: VSMFHEQVTPARYFSTSFLSQEQHHECRPQSQILKDDITSQMTLDRRLIERSVSIDESSQSDHDHLVWELKHQAVEWPGLLSSWPSLQMEEYKISSVERQ
V MF EQ +PARYFSTSFLSQEQHHECRPQSQILKDD TSQMTLDRRLIERSV IDE S+SDHDHL+WELKHQAVEWP LLSSWPSLQMEEYKISS E++
Subjt: VSMFHEQVTPARYFSTSFLSQEQHHECRPQSQILKDDITSQMTLDRRLIERSVSIDESSQSDHDHLVWELKHQAVEWPGLLSSWPSLQMEEYKISSVERQ
Query: SYSASGELLVKDEPENVISLAKKALSASKQAALLVDESELVGTNLDYTSRDDSLSKEGRTVKSTRLQDRRSKKRKVPKHVTTIHETSILKGKDSRRKTSE
SY+A GE+LVKDEPENVI+LAKKALSASKQAALLVDESELVGT+LDY+S DDSLSKEGRTV+STRLQDRRSKKRKVPKHVTTIHETS +GKDSRRKTSE
Subjt: SYSASGELLVKDEPENVISLAKKALSASKQAALLVDESELVGTNLDYTSRDDSLSKEGRTVKSTRLQDRRSKKRKVPKHVTTIHETSILKGKDSRRKTSE
Query: NFDPNDPLRLFLWGPETKKLLTAQEESELIVQIQDLMILDNVKARLQSQFGREPTLVEWAEALGLTCQCLQSQLHSFRISREKLINANLRMVVHIAKQYQ
FDPNDPLRLFLWGPETKKLLTAQEES+LIVQIQDLMILDNVKA+LQSQFGREPTLVEWAEALG+TCQ LQSQLHSFR SREKLINANLRMVVHIAKQY
Subjt: NFDPNDPLRLFLWGPETKKLLTAQEESELIVQIQDLMILDNVKARLQSQFGREPTLVEWAEALGLTCQCLQSQLHSFRISREKLINANLRMVVHIAKQYQ
Query: GRGLSLHDLLQATGHMHTEQSAKHAYSCGLLPKLECRALMTTSFVVQTHYPPHYTQSSSSQESYKPLNIELFVLRDWFRVQDSCFNEGSLGLMKSVEKFK
GRGLSLHDLLQ EGSLGLMKSVEKFK
Subjt: GRGLSLHDLLQATGHMHTEQSAKHAYSCGLLPKLECRALMTTSFVVQTHYPPHYTQSSSSQESYKPLNIELFVLRDWFRVQDSCFNEGSLGLMKSVEKFK
Query: PQAGCRFATYAYWWIRQSIRKAIFEHSRTIRLPENVYGLLGKVTEAKNYFVRAGNYKPSKEELAARVGITVERLDKLLFMSRIPRSLQQPVWADQDTTFQ
PQAGCRFA+YAYWWIR SI KAIF+HSRTIRLPENVY LLGKVTEAKNY VRAGNYKPSKEELAA VGITVERLDKL+FMSRIPRSLQQPVWADQDTT+Q
Subjt: PQAGCRFATYAYWWIRQSIRKAIFEHSRTIRLPENVYGLLGKVTEAKNYFVRAGNYKPSKEELAARVGITVERLDKLLFMSRIPRSLQQPVWADQDTTFQ
Query: DRKFNKDYYQKRENSTKIDLQVWYYFIAKFVKCWVTNEIHFITVIINKEAVLNAKENNDVRGRDHRDEITADSEVDTPDVSVERELMRRHIRNLLSILSP
EITADSEVDTPDVSVERELMRRHIRNLLSILSP
Subjt: DRKFNKDYYQKRENSTKIDLQVWYYFIAKFVKCWVTNEIHFITVIINKEAVLNAKENNDVRGRDHRDEITADSEVDTPDVSVERELMRRHIRNLLSILSP
Query: KERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAYADLLT
KERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAYADLLT
Subjt: KERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAYADLLT
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| XP_038882876.1 RNA polymerase sigma factor sigF, chloroplastic [Benincasa hispida] | 5.3e-257 | 74.21 | Show/hide |
Query: NVSMFHEQVTPARYFSTSFLSQEQHHECRPQSQILKDDITSQMTLDRRLIERSVSIDESSQSDHDHLVWELKHQAVEWPGLLSSWPSLQMEEYKISSVER
+VSMFHEQ PARYFSTSFLSQEQHHECRPQSQILKDD TSQ TLDRRLIERSVSIDE ++SDHDHL+WE KHQAVEWPGLLSSWPSLQMEEYKISSVE+
Subjt: NVSMFHEQVTPARYFSTSFLSQEQHHECRPQSQILKDDITSQMTLDRRLIERSVSIDESSQSDHDHLVWELKHQAVEWPGLLSSWPSLQMEEYKISSVER
Query: QSYSASGELLVKDEPENVISLAKKALSASKQAALLVDESELVGTNLDYTSRDDSLSKEGRTVKSTRLQDRRSKKRKVPKHVTTIHETSILKGKDSRRKTS
QSY+A GE+LVKDEPENVI+LAKKALSASKQAA LVDESELVGTNLDYTS DDSLSKEGRTV+STRLQDRRSKKRKVPKHVTTIHETS KGKDSRRKT
Subjt: QSYSASGELLVKDEPENVISLAKKALSASKQAALLVDESELVGTNLDYTSRDDSLSKEGRTVKSTRLQDRRSKKRKVPKHVTTIHETSILKGKDSRRKTS
Query: ENFDPNDPLRLFLWGPETKKLLTAQEESELIVQIQDLMILDNVKARLQSQFGREPTLVEWAEALGLTCQCLQSQLHSFRISREKLINANLRMVVHIAKQY
ENFDPNDPLRLFLWGPETKKLLT +EESELIVQIQDLMILDNVKARLQSQFGREPTLVEWAEALGLTCQ LQSQL SFRISREKLINANLRMVVHIAKQY
Subjt: ENFDPNDPLRLFLWGPETKKLLTAQEESELIVQIQDLMILDNVKARLQSQFGREPTLVEWAEALGLTCQCLQSQLHSFRISREKLINANLRMVVHIAKQY
Query: QGRGLSLHDLLQATGHMHTEQSAKHAYSCGLLPKLECRALMTTSFVVQTHYPPHYTQSSSSQESYKPLNIELFVLRDWFRVQDSCFNEGSLGLMKSVEKF
QGRGLSL DLLQ EGSLGLMKSVEKF
Subjt: QGRGLSLHDLLQATGHMHTEQSAKHAYSCGLLPKLECRALMTTSFVVQTHYPPHYTQSSSSQESYKPLNIELFVLRDWFRVQDSCFNEGSLGLMKSVEKF
Query: KPQAGCRFATYAYWWIRQSIRKAIFEHSRTIRLPENVYGLLGKVTEAKNYFVRAGNYKPSKEELAARVGITVERLDKLLFMSRIPRSLQQPVWADQDTTF
KPQAGCRFATYAYWWIRQSIRKAIFEHSRTIRLPENVYGLLGKVTEAKNYFVRAGNYKPSKEELAARVGITVERLDKLLFMSRIPRSLQQPVW DQDTTF
Subjt: KPQAGCRFATYAYWWIRQSIRKAIFEHSRTIRLPENVYGLLGKVTEAKNYFVRAGNYKPSKEELAARVGITVERLDKLLFMSRIPRSLQQPVWADQDTTF
Query: QDRKFNKDYYQKRENSTKIDLQVWYYFIAKFVKCWVTNEIHFITVIINKEAVLNAKENNDVRGRDHRDEITADSEVDTPDVSVERELMRRHIRNLLSILS
Q EITADSE+DTPDVSVERELMRRHIRNLLSILS
Subjt: QDRKFNKDYYQKRENSTKIDLQVWYYFIAKFVKCWVTNEIHFITVIINKEAVLNAKENNDVRGRDHRDEITADSEVDTPDVSVERELMRRHIRNLLSILS
Query: PKERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAYADLLT
PKERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLKRC NSQGLGAYADLLT
Subjt: PKERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAYADLLT
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0KEQ6 RNA polymerase sigma factor | 6.3e-248 | 71.04 | Show/hide |
Query: NVSMFHEQVTPARYFSTSFLSQEQHHECRPQSQILKDDITSQMTLDRRLIERSVSIDESSQSDHDHLVWELKHQAVEWPGLLSSWPSLQMEEYKISSVER
+V MF EQ +PARYFSTSFLSQEQHHECRPQSQILKDD +SQMTL+RRLIERSV IDE S+ DHDHL+WELKHQAVEWPGLLSSWP +QMEEYKISS+E+
Subjt: NVSMFHEQVTPARYFSTSFLSQEQHHECRPQSQILKDDITSQMTLDRRLIERSVSIDESSQSDHDHLVWELKHQAVEWPGLLSSWPSLQMEEYKISSVER
Query: QSYSASGELLVKDEPENVISLAKKALSASKQAALLVDESELVGTNLDYTSRDDSLSKEGRTVKSTRLQDRRSKKRKVPKHVTTIHETSILKGKDSRRKTS
+SY+A+GE+LVKDEPENVI+LAKKALSASKQAALLVDE+ELVGT+LDY+S DDSLSKEGRTV+STRLQDRRSKKRKVPKHVTTI E S +GKDSRRKTS
Subjt: QSYSASGELLVKDEPENVISLAKKALSASKQAALLVDESELVGTNLDYTSRDDSLSKEGRTVKSTRLQDRRSKKRKVPKHVTTIHETSILKGKDSRRKTS
Query: ENFDPNDPLRLFLWGPETKKLLTAQEESELIVQIQDLMILDNVKARLQSQFGREPTLVEWAEALGLTCQCLQSQLHSFRISREKLINANLRMVVHIAKQY
E FDPNDPLRLFLWGPETKKLLTAQEESELIVQIQDLMILDNVKARLQSQF REPTLVEWAEALG+TCQ LQSQLH F+ SREKLINANLRMVVHIAKQY
Subjt: ENFDPNDPLRLFLWGPETKKLLTAQEESELIVQIQDLMILDNVKARLQSQFGREPTLVEWAEALGLTCQCLQSQLHSFRISREKLINANLRMVVHIAKQY
Query: QGRGLSLHDLLQATGHMHTEQSAKHAYSCGLLPKLECRALMTTSFVVQTHYPPHYTQSSSSQESYKPLNIELFVLRDWFRVQDSCFNEGSLGLMKSVEKF
QGRGLSLHDLLQ GSLGLMKSVEKF
Subjt: QGRGLSLHDLLQATGHMHTEQSAKHAYSCGLLPKLECRALMTTSFVVQTHYPPHYTQSSSSQESYKPLNIELFVLRDWFRVQDSCFNEGSLGLMKSVEKF
Query: KPQAGCRFATYAYWWIRQSIRKAIFEHSRTIRLPENVYGLLGKVTEAKNYFVRAGNYKPSKEELAARVGITVERLDKLLFMSRIPRSLQQPVWADQDTTF
KPQAGCRF +YAYWWIR SI KAIF+HSRTIRLPENVY LLGKVTEAKNYFVRAGNYKPSKEELAARVGITVER DKL+FMSRIPRSLQQPVWADQ+TTF
Subjt: KPQAGCRFATYAYWWIRQSIRKAIFEHSRTIRLPENVYGLLGKVTEAKNYFVRAGNYKPSKEELAARVGITVERLDKLLFMSRIPRSLQQPVWADQDTTF
Query: QDRKFNKDYYQKRENSTKIDLQVWYYFIAKFVKCWVTNEIHFITVIINKEAVLNAKENNDVRGRDHRDEITADSEVDTPDVSVERELMRRHIRNLLSILS
Q EITADSEVDTPDVSVERELMRRHIRNLLSILS
Subjt: QDRKFNKDYYQKRENSTKIDLQVWYYFIAKFVKCWVTNEIHFITVIINKEAVLNAKENNDVRGRDHRDEITADSEVDTPDVSVERELMRRHIRNLLSILS
Query: PKERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAYADLLT
PKERRIIRLRFGIEDG+EKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAYADLLT
Subjt: PKERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAYADLLT
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| A0A1S4E3S8 RNA polymerase sigma factor sigF, chloroplastic isoform X1 | 5.5e-252 | 72.51 | Show/hide |
Query: VSMFHEQVTPARYFSTSFLSQEQHHECRPQSQILKDDITSQMTLDRRLIERSVSIDESSQSDHDHLVWELKHQAVEWPGLLSSWPSLQMEEYKISSVERQ
V MF EQ +PARYFSTSFLSQEQHHECRPQSQILKDD TSQMTLDRRLIERSV IDE S+SDHDHL+WELKHQAVEWP LLSSWPSLQMEEYKISS E++
Subjt: VSMFHEQVTPARYFSTSFLSQEQHHECRPQSQILKDDITSQMTLDRRLIERSVSIDESSQSDHDHLVWELKHQAVEWPGLLSSWPSLQMEEYKISSVERQ
Query: SYSASGELLVKDEPENVISLAKKALSASKQAALLVDESELVGTNLDYTSRDDSLSKEGRTVKSTRLQDRRSKKRKVPKHVTTIHETSILKGKDSRRKTSE
SY+A GE+LVKDEPENVI+LAKKALSASKQAALLVDESELVGT+LDY+S DDSLSKEGRTV+STRLQDRRSKKRKVPKHVTTIHETS +GKDSRRKTSE
Subjt: SYSASGELLVKDEPENVISLAKKALSASKQAALLVDESELVGTNLDYTSRDDSLSKEGRTVKSTRLQDRRSKKRKVPKHVTTIHETSILKGKDSRRKTSE
Query: NFDPNDPLRLFLWGPETKKLLTAQEESELIVQIQDLMILDNVKARLQSQFGREPTLVEWAEALGLTCQCLQSQLHSFRISREKLINANLRMVVHIAKQYQ
FDPNDPLRLFLWGPETKKLLTAQEES+LIVQIQDLMILDNVKA+LQSQFGREPTLVEWAEALG+TCQ LQSQLHSFR SREKLINANLRMVVHIAKQY
Subjt: NFDPNDPLRLFLWGPETKKLLTAQEESELIVQIQDLMILDNVKARLQSQFGREPTLVEWAEALGLTCQCLQSQLHSFRISREKLINANLRMVVHIAKQYQ
Query: GRGLSLHDLLQATGHMHTEQSAKHAYSCGLLPKLECRALMTTSFVVQTHYPPHYTQSSSSQESYKPLNIELFVLRDWFRVQDSCFNEGSLGLMKSVEKFK
GRGLSLHDLLQ EGSLGLMKSVEKFK
Subjt: GRGLSLHDLLQATGHMHTEQSAKHAYSCGLLPKLECRALMTTSFVVQTHYPPHYTQSSSSQESYKPLNIELFVLRDWFRVQDSCFNEGSLGLMKSVEKFK
Query: PQAGCRFATYAYWWIRQSIRKAIFEHSRTIRLPENVYGLLGKVTEAKNYFVRAGNYKPSKEELAARVGITVERLDKLLFMSRIPRSLQQPVWADQDTTFQ
PQAGCRFA+YAYWWIR SI KAIF+HSRTIRLPENVY LLGKVTEAKNY VRAGNYKPSKEELAA VGITVERLDKL+FMSRIPRSLQQPVWADQDTT+Q
Subjt: PQAGCRFATYAYWWIRQSIRKAIFEHSRTIRLPENVYGLLGKVTEAKNYFVRAGNYKPSKEELAARVGITVERLDKLLFMSRIPRSLQQPVWADQDTTFQ
Query: DRKFNKDYYQKRENSTKIDLQVWYYFIAKFVKCWVTNEIHFITVIINKEAVLNAKENNDVRGRDHRDEITADSEVDTPDVSVERELMRRHIRNLLSILSP
EITADSEVDTPDVSVERELMRRHIRNLLSILSP
Subjt: DRKFNKDYYQKRENSTKIDLQVWYYFIAKFVKCWVTNEIHFITVIINKEAVLNAKENNDVRGRDHRDEITADSEVDTPDVSVERELMRRHIRNLLSILSP
Query: KERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAYADLLT
KERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAYADLLT
Subjt: KERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAYADLLT
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| A0A1S4E4I4 RNA polymerase sigma factor sigF, chloroplastic isoform X2 | 5.5e-252 | 72.51 | Show/hide |
Query: VSMFHEQVTPARYFSTSFLSQEQHHECRPQSQILKDDITSQMTLDRRLIERSVSIDESSQSDHDHLVWELKHQAVEWPGLLSSWPSLQMEEYKISSVERQ
V MF EQ +PARYFSTSFLSQEQHHECRPQSQILKDD TSQMTLDRRLIERSV IDE S+SDHDHL+WELKHQAVEWP LLSSWPSLQMEEYKISS E++
Subjt: VSMFHEQVTPARYFSTSFLSQEQHHECRPQSQILKDDITSQMTLDRRLIERSVSIDESSQSDHDHLVWELKHQAVEWPGLLSSWPSLQMEEYKISSVERQ
Query: SYSASGELLVKDEPENVISLAKKALSASKQAALLVDESELVGTNLDYTSRDDSLSKEGRTVKSTRLQDRRSKKRKVPKHVTTIHETSILKGKDSRRKTSE
SY+A GE+LVKDEPENVI+LAKKALSASKQAALLVDESELVGT+LDY+S DDSLSKEGRTV+STRLQDRRSKKRKVPKHVTTIHETS +GKDSRRKTSE
Subjt: SYSASGELLVKDEPENVISLAKKALSASKQAALLVDESELVGTNLDYTSRDDSLSKEGRTVKSTRLQDRRSKKRKVPKHVTTIHETSILKGKDSRRKTSE
Query: NFDPNDPLRLFLWGPETKKLLTAQEESELIVQIQDLMILDNVKARLQSQFGREPTLVEWAEALGLTCQCLQSQLHSFRISREKLINANLRMVVHIAKQYQ
FDPNDPLRLFLWGPETKKLLTAQEES+LIVQIQDLMILDNVKA+LQSQFGREPTLVEWAEALG+TCQ LQSQLHSFR SREKLINANLRMVVHIAKQY
Subjt: NFDPNDPLRLFLWGPETKKLLTAQEESELIVQIQDLMILDNVKARLQSQFGREPTLVEWAEALGLTCQCLQSQLHSFRISREKLINANLRMVVHIAKQYQ
Query: GRGLSLHDLLQATGHMHTEQSAKHAYSCGLLPKLECRALMTTSFVVQTHYPPHYTQSSSSQESYKPLNIELFVLRDWFRVQDSCFNEGSLGLMKSVEKFK
GRGLSLHDLLQ EGSLGLMKSVEKFK
Subjt: GRGLSLHDLLQATGHMHTEQSAKHAYSCGLLPKLECRALMTTSFVVQTHYPPHYTQSSSSQESYKPLNIELFVLRDWFRVQDSCFNEGSLGLMKSVEKFK
Query: PQAGCRFATYAYWWIRQSIRKAIFEHSRTIRLPENVYGLLGKVTEAKNYFVRAGNYKPSKEELAARVGITVERLDKLLFMSRIPRSLQQPVWADQDTTFQ
PQAGCRFA+YAYWWIR SI KAIF+HSRTIRLPENVY LLGKVTEAKNY VRAGNYKPSKEELAA VGITVERLDKL+FMSRIPRSLQQPVWADQDTT+Q
Subjt: PQAGCRFATYAYWWIRQSIRKAIFEHSRTIRLPENVYGLLGKVTEAKNYFVRAGNYKPSKEELAARVGITVERLDKLLFMSRIPRSLQQPVWADQDTTFQ
Query: DRKFNKDYYQKRENSTKIDLQVWYYFIAKFVKCWVTNEIHFITVIINKEAVLNAKENNDVRGRDHRDEITADSEVDTPDVSVERELMRRHIRNLLSILSP
EITADSEVDTPDVSVERELMRRHIRNLLSILSP
Subjt: DRKFNKDYYQKRENSTKIDLQVWYYFIAKFVKCWVTNEIHFITVIINKEAVLNAKENNDVRGRDHRDEITADSEVDTPDVSVERELMRRHIRNLLSILSP
Query: KERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAYADLLT
KERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAYADLLT
Subjt: KERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAYADLLT
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| A0A5A7V893 RNA polymerase sigma factor sigF | 1.6e-251 | 72.36 | Show/hide |
Query: VSMFHEQVTPARYFSTSFLSQEQHHECRPQSQILKDDITSQMTLDRRLIERSVSIDESSQSDHDHLVWELKHQAVEWPGLLSSWPSLQMEEYKISSVERQ
V MF EQ +PARYFSTSFLSQEQHHECRPQSQILKDD TSQMTLDRRLIERSV IDE S+SDHDHL+WELKHQAVEWP LLSSWPSLQMEEYKISS E++
Subjt: VSMFHEQVTPARYFSTSFLSQEQHHECRPQSQILKDDITSQMTLDRRLIERSVSIDESSQSDHDHLVWELKHQAVEWPGLLSSWPSLQMEEYKISSVERQ
Query: SYSASGELLVKDEPENVISLAKKALSASKQAALLVDESELVGTNLDYTSRDDSLSKEGRTVKSTRLQDRRSKKRKVPKHVTTIHETSILKGKDSRRKTSE
SY+A GE+LVKDEPENVI+LAKKALSASKQAALLVDESELVGT+LDY+S DDSLSKEGRTV+STRLQ+RRSKKRKVPKHVTTIHETS +GKDSRRKTSE
Subjt: SYSASGELLVKDEPENVISLAKKALSASKQAALLVDESELVGTNLDYTSRDDSLSKEGRTVKSTRLQDRRSKKRKVPKHVTTIHETSILKGKDSRRKTSE
Query: NFDPNDPLRLFLWGPETKKLLTAQEESELIVQIQDLMILDNVKARLQSQFGREPTLVEWAEALGLTCQCLQSQLHSFRISREKLINANLRMVVHIAKQYQ
FDPNDPLRLFLWGPETKKLLTAQEES+LIVQIQDLMILDNVKA+LQSQFGREPTLVEWAEALG+TCQ LQSQLHSFR SREKLINANLRMVVHIAKQY
Subjt: NFDPNDPLRLFLWGPETKKLLTAQEESELIVQIQDLMILDNVKARLQSQFGREPTLVEWAEALGLTCQCLQSQLHSFRISREKLINANLRMVVHIAKQYQ
Query: GRGLSLHDLLQATGHMHTEQSAKHAYSCGLLPKLECRALMTTSFVVQTHYPPHYTQSSSSQESYKPLNIELFVLRDWFRVQDSCFNEGSLGLMKSVEKFK
GRGLSLHDLLQ EGSLGLMKSVEKFK
Subjt: GRGLSLHDLLQATGHMHTEQSAKHAYSCGLLPKLECRALMTTSFVVQTHYPPHYTQSSSSQESYKPLNIELFVLRDWFRVQDSCFNEGSLGLMKSVEKFK
Query: PQAGCRFATYAYWWIRQSIRKAIFEHSRTIRLPENVYGLLGKVTEAKNYFVRAGNYKPSKEELAARVGITVERLDKLLFMSRIPRSLQQPVWADQDTTFQ
PQAGCRFA+YAYWWIR SI KAIF+HSRTIRLPENVY LLGKVTEAKNY VRAGNYKPSKEELAA VGITVERLDKL+FMSRIPRSLQQPVWADQDTT+Q
Subjt: PQAGCRFATYAYWWIRQSIRKAIFEHSRTIRLPENVYGLLGKVTEAKNYFVRAGNYKPSKEELAARVGITVERLDKLLFMSRIPRSLQQPVWADQDTTFQ
Query: DRKFNKDYYQKRENSTKIDLQVWYYFIAKFVKCWVTNEIHFITVIINKEAVLNAKENNDVRGRDHRDEITADSEVDTPDVSVERELMRRHIRNLLSILSP
EITADSEVDTPDVSVERELMRRHIRNLLSILSP
Subjt: DRKFNKDYYQKRENSTKIDLQVWYYFIAKFVKCWVTNEIHFITVIINKEAVLNAKENNDVRGRDHRDEITADSEVDTPDVSVERELMRRHIRNLLSILSP
Query: KERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAYADLLT
KERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAYADLLT
Subjt: KERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAYADLLT
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| A0A5D3CAF4 RNA polymerase sigma factor | 2.7e-251 | 72.42 | Show/hide |
Query: MFHEQVTPARYFSTSFLSQEQHHECRPQSQILKDDITSQMTLDRRLIERSVSIDESSQSDHDHLVWELKHQAVEWPGLLSSWPSLQMEEYKISSVERQSY
MF EQ +PARYFSTSFLSQEQHHECRPQSQILKDD TSQMTLDRRLIERSV IDE S+SDHDHL+WELKHQAVEWP LLSSWPSLQMEEYKISS E++SY
Subjt: MFHEQVTPARYFSTSFLSQEQHHECRPQSQILKDDITSQMTLDRRLIERSVSIDESSQSDHDHLVWELKHQAVEWPGLLSSWPSLQMEEYKISSVERQSY
Query: SASGELLVKDEPENVISLAKKALSASKQAALLVDESELVGTNLDYTSRDDSLSKEGRTVKSTRLQDRRSKKRKVPKHVTTIHETSILKGKDSRRKTSENF
+A GE+LVKDEPENVI+LAKKALSASKQAALLVDESELVGT+LDY+S DDSLSKEGRTV+STRLQ+RRSKKRKVPKHVTTIHETS +GKDSRRKTSE F
Subjt: SASGELLVKDEPENVISLAKKALSASKQAALLVDESELVGTNLDYTSRDDSLSKEGRTVKSTRLQDRRSKKRKVPKHVTTIHETSILKGKDSRRKTSENF
Query: DPNDPLRLFLWGPETKKLLTAQEESELIVQIQDLMILDNVKARLQSQFGREPTLVEWAEALGLTCQCLQSQLHSFRISREKLINANLRMVVHIAKQYQGR
DPNDPLRLFLWGPETKKLLTAQEES+LIVQIQDLMILDNVKA+LQSQFGREPTLVEWAEALG+TCQ LQSQLHSFR SREKLINANLRMVVHIAKQY GR
Subjt: DPNDPLRLFLWGPETKKLLTAQEESELIVQIQDLMILDNVKARLQSQFGREPTLVEWAEALGLTCQCLQSQLHSFRISREKLINANLRMVVHIAKQYQGR
Query: GLSLHDLLQATGHMHTEQSAKHAYSCGLLPKLECRALMTTSFVVQTHYPPHYTQSSSSQESYKPLNIELFVLRDWFRVQDSCFNEGSLGLMKSVEKFKPQ
GLSLHDLLQ EGSLGLMKSVEKFKPQ
Subjt: GLSLHDLLQATGHMHTEQSAKHAYSCGLLPKLECRALMTTSFVVQTHYPPHYTQSSSSQESYKPLNIELFVLRDWFRVQDSCFNEGSLGLMKSVEKFKPQ
Query: AGCRFATYAYWWIRQSIRKAIFEHSRTIRLPENVYGLLGKVTEAKNYFVRAGNYKPSKEELAARVGITVERLDKLLFMSRIPRSLQQPVWADQDTTFQDR
AGCRFA+YAYWWIR SI KAIF+HSRTIRLPENVY LLGKVTEAKNY VRAGNYKPSKEELAA VGITVERLDKL+FMSRIPRSLQQPVWADQDTT+Q
Subjt: AGCRFATYAYWWIRQSIRKAIFEHSRTIRLPENVYGLLGKVTEAKNYFVRAGNYKPSKEELAARVGITVERLDKLLFMSRIPRSLQQPVWADQDTTFQDR
Query: KFNKDYYQKRENSTKIDLQVWYYFIAKFVKCWVTNEIHFITVIINKEAVLNAKENNDVRGRDHRDEITADSEVDTPDVSVERELMRRHIRNLLSILSPKE
EITADSEVDTPDVSVERELMRRHIRNLLSILSPKE
Subjt: KFNKDYYQKRENSTKIDLQVWYYFIAKFVKCWVTNEIHFITVIINKEAVLNAKENNDVRGRDHRDEITADSEVDTPDVSVERELMRRHIRNLLSILSPKE
Query: RRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAYADLLT
RRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAYADLLT
Subjt: RRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAYADLLT
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| SwissProt top hits | e value | %identity | Alignment |
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| O22056 RNA polymerase sigma factor sigB | 8.4e-48 | 27.45 | Show/hide |
Query: ERQSYSASGELLVKDEPENVISLAKKALSASKQAALLVDESELVGTNLDYTSRDDSLSKEGRTVKSTRLQDRRSKKRK-VPKHVTTIHETSILKGKDSRR
E++ G L V D N I K SAS + ++ ESE ++ S+S V+STR +R++++ K + K + I +R
Subjt: ERQSYSASGELLVKDEPENVISLAKKALSASKQAALLVDESELVGTNLDYTSRDDSLSKEGRTVKSTRLQDRRSKKRK-VPKHVTTIHETSILKGKDSRR
Query: KTSENFDPNDPLRLFLWGPETKKLLTAQEESELIVQIQDLMILDNVKARLQSQFGREPTLVEWAEALGLTCQCLQSQLHSFRISREKLINANLRMVVHIA
++ D NDPLR + KLLT +EE EL IQDL+ L+ ++ L + GR+PT +WA A G+ + L+ ++H + ++K+I +N+R+V+ IA
Subjt: KTSENFDPNDPLRLFLWGPETKKLLTAQEESELIVQIQDLMILDNVKARLQSQFGREPTLVEWAEALGLTCQCLQSQLHSFRISREKLINANLRMVVHIA
Query: KQYQGRGLSLHDLLQATGHMHTEQSAKHAYSCGLLPKLECRALMTTSFVVQTHYPPHYTQSSSSQESYKPLNIELFVLRDWFRVQDSCFNEGSLGLMKSV
K YQG G++L DL+Q EG GL++
Subjt: KQYQGRGLSLHDLLQATGHMHTEQSAKHAYSCGLLPKLECRALMTTSFVVQTHYPPHYTQSSSSQESYKPLNIELFVLRDWFRVQDSCFNEGSLGLMKSV
Query: EKFKPQAGCRFATYAYWWIRQSIRKAIFEHSRTIRLPENVYGLLGKVTEAKNYFVRAGNYKPSKEELAARVGITVERLDKLLFMSRIPRSLQQPVWADQD
EKF G +F+TYA+WWI+Q++RK++ + SR IRLP ++ +V EA+ P EE+A G++++RL +L + PRSL Q + +Q
Subjt: EKFKPQAGCRFATYAYWWIRQSIRKAIFEHSRTIRLPENVYGLLGKVTEAKNYFVRAGNYKPSKEELAARVGITVERLDKLLFMSRIPRSLQQPVWADQD
Query: TTFQDRKFNKDYYQKRENSTKIDLQVWYYFIAKFVKCWVTNEIHFITVIINKEAVLNAKENNDVRGRDHRDEITADSEVDTPDVSVERELMRRHIRNLLS
N K + E+ AD E T + + +E MR+ + +L
Subjt: TTFQDRKFNKDYYQKRENSTKIDLQVWYYFIAKFVKCWVTNEIHFITVIINKEAVLNAKENNDVRGRDHRDEITADSEVDTPDVSVERELMRRHIRNLLS
Query: ILSPKERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAY
L +E+++IR RFG+EDG+ KTL EIG M G+S+ERVRQ+E+ A KLK + L Y
Subjt: ILSPKERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAY
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| P26683 RNA polymerase sigma factor SigA | 2.5e-47 | 28.76 | Show/hide |
Query: KGKDSRRKT--SENFDPNDPLRLFLWGPETKKLLTAQEESELIVQIQDLMILDNVKARLQSQFGREPTLVEWAEALGLTCQCLQSQLHSFRISREKLINA
K SRR+T + D +RL+L +LL A EE EL +I DL+ L+ V+ RL + R+P EWAEA+ L + +LH R +++K++ +
Subjt: KGKDSRRKT--SENFDPNDPLRLFLWGPETKKLLTAQEESELIVQIQDLMILDNVKARLQSQFGREPTLVEWAEALGLTCQCLQSQLHSFRISREKLINA
Query: NLRMVVHIAKQYQGRGLSLHDLLQATGHMHTEQSAKHAYSCGLLPKLECRALMTTSFVVQTHYPPHYTQSSSSQESYKPLNIELFVLRDWFRVQDSCFNE
NLR+VV IAK+Y RGLS DL+Q E
Subjt: NLRMVVHIAKQYQGRGLSLHDLLQATGHMHTEQSAKHAYSCGLLPKLECRALMTTSFVVQTHYPPHYTQSSSSQESYKPLNIELFVLRDWFRVQDSCFNE
Query: GSLGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKAIFEHSRTIRLPENVYGLLGKVTEAKNYFVRAGNYKPSKEELAARVGITVERLDKLLFMSRIPRSL
GSLGL+++ EKF + G +F+TYA WWIRQ+I +AI + SRTIRLP ++Y + ++ + + KP++EE+A R+ +T+E+L + +++P SL
Subjt: GSLGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKAIFEHSRTIRLPENVYGLLGKVTEAKNYFVRAGNYKPSKEELAARVGITVERLDKLLFMSRIPRSL
Query: QQPVWADQDTTFQDRKFNKDYYQKRENSTKIDLQVWYYFIAKFVKCWVTNEIHFITVIINKEAVLNAKENNDVRGRDHRDEITADSEVDTPDVSVERELM
+ P+ ++D+ D FI +S+ +TP+ V + L+
Subjt: QQPVWADQDTTFQDRKFNKDYYQKRENSTKIDLQVWYYFIAKFVKCWVTNEIHFITVIINKEAVLNAKENNDVRGRDHRDEITADSEVDTPDVSVERELM
Query: RRHIRNLLSILSPKERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLK
R + +L LSP+ER ++RLR+G++DG+ KTL EIG +F +++ER+RQ+E +AL KL+
Subjt: RRHIRNLLSILSPKERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLK
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| P38023 RNA polymerase sigma factor SigA1 | 1.1e-44 | 27.44 | Show/hide |
Query: VKSTRLQDRRSKKRK----VPKHVTTIHETSILKGKDSRRKTSENFD-------------PNDPLRLFLWGPETKKLLTAQEESELIVQIQDLMILDNVK
+K + +RS ++K V + TTI T+ + D E+ D D +RL+L +LL A EE EL QI DL+ L+ ++
Subjt: VKSTRLQDRRSKKRK----VPKHVTTIHETSILKGKDSRRKTSENFD-------------PNDPLRLFLWGPETKKLLTAQEESELIVQIQDLMILDNVK
Query: ARLQSQFGREPTLVEWAEALGLTCQCLQSQLHSFRISREKLINANLRMVVHIAKQYQGRGLSLHDLLQATGHMHTEQSAKHAYSCGLLPKLECRALMTTS
L Q R P+ EWA A+ + +L R +++K++ +NLR+VV IAK+Y RGLS DL+Q
Subjt: ARLQSQFGREPTLVEWAEALGLTCQCLQSQLHSFRISREKLINANLRMVVHIAKQYQGRGLSLHDLLQATGHMHTEQSAKHAYSCGLLPKLECRALMTTS
Query: FVVQTHYPPHYTQSSSSQESYKPLNIELFVLRDWFRVQDSCFNEGSLGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKAIFEHSRTIRLPENVYGLLGKV
EGSLGL+++ EKF + G +F+TYA WWIRQ+I +AI + SRTIRLP ++Y + ++
Subjt: FVVQTHYPPHYTQSSSSQESYKPLNIELFVLRDWFRVQDSCFNEGSLGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKAIFEHSRTIRLPENVYGLLGKV
Query: TEAKNYFVRAGNYKPSKEELAARVGITVERLDKLLFMSRIPRSLQQPVWADQDTTFQDRKFNKDYYQKRENSTKIDLQVWYYFIAKFVKCWVTNEIHFIT
+ + KP++EE+A R+ +T+E+L + +++P SL+ P+ ++D+
Subjt: TEAKNYFVRAGNYKPSKEELAARVGITVERLDKLLFMSRIPRSLQQPVWADQDTTFQDRKFNKDYYQKRENSTKIDLQVWYYFIAKFVKCWVTNEIHFIT
Query: VIINKEAVLNAKENNDVRGRDHRDEITADSEVDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRALY
D I AD E TP+ V + L+R + +LS LSP+ER ++RLR+G++DG+ KTL EIG +F +++ER+RQ+E +AL
Subjt: VIINKEAVLNAKENNDVRGRDHRDEITADSEVDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRALY
Query: KLK
KL+
Subjt: KLK
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| P74565 RNA polymerase sigma factor SigA | 2.7e-38 | 25.59 | Show/hide |
Query: ETSILKGKDSR----RKTSENFDP--NDPLRLFLWGPETKKLLTAQEESELIVQIQDLMILDNVKARLQSQFGREPTLVEWAE-----------------
E + +GK+ + RK + P D +R++L +LL A+EE EL QI DL+ L+ ++ L Q R+P+ +EW +
Subjt: ETSILKGKDSR----RKTSENFDP--NDPLRLFLWGPETKKLLTAQEESELIVQIQDLMILDNVKARLQSQFGREPTLVEWAE-----------------
Query: -----------------ALGLTCQCLQSQLHSF----------RISREKLINANLRMVVHIAKQYQGRGLSLHDLLQATGHMHTEQSAKHAYSCGLLPKL
L L + Q +F R +++K++ +NLR+VV IAK+Y RGLS DL+Q
Subjt: -----------------ALGLTCQCLQSQLHSF----------RISREKLINANLRMVVHIAKQYQGRGLSLHDLLQATGHMHTEQSAKHAYSCGLLPKL
Query: ECRALMTTSFVVQTHYPPHYTQSSSSQESYKPLNIELFVLRDWFRVQDSCFNEGSLGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKAIFEHSRTIRLPE
EGSLGL+++ EKF + G +F+TYA WWIRQ+I +AI + SRTIRLP
Subjt: ECRALMTTSFVVQTHYPPHYTQSSSSQESYKPLNIELFVLRDWFRVQDSCFNEGSLGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKAIFEHSRTIRLPE
Query: NVYGLLGKVTEAKNYFVRAGNYKPSKEELAARVGITVERLDKLLFMSRIPRSLQQPVWADQDTTFQDRKFNKDYYQKRENSTKIDLQVWYYFIAKFVKCW
++Y + ++ + + KP++EE+A ++ +T+E+L + +++P SL+ P+ ++D+
Subjt: NVYGLLGKVTEAKNYFVRAGNYKPSKEELAARVGITVERLDKLLFMSRIPRSLQQPVWADQDTTFQDRKFNKDYYQKRENSTKIDLQVWYYFIAKFVKCW
Query: VTNEIHFITVIINKEAVLNAKENNDVRGRDHRDEITADSEVDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERV
D I AD E TP+ V + L+R + N+L LSP+ER ++RLR+G++DG+ KTL EIG +F +++ER+
Subjt: VTNEIHFITVIINKEAVLNAKENNDVRGRDHRDEITADSEVDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERV
Query: RQLENRALYKLK
RQ+E +AL KL+
Subjt: RQLENRALYKLK
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| Q9LD95 RNA polymerase sigma factor sigF, chloroplastic | 2.6e-129 | 43.81 | Show/hide |
Query: NVSMFHEQVTP-----------ARYFSTSFLSQEQHHECRPQSQILKDDITSQMTLDRRLIERSVSIDESSQSDHDHLVWELKHQAVEWPGLLSSWPSLQ
+V M H+Q T +R+F S LSQE E RP S L+DD TSQ+TL+RR + VS E + + +L H W L+S S
Subjt: NVSMFHEQVTP-----------ARYFSTSFLSQEQHHECRPQSQILKDDITSQMTLDRRLIERSVSIDESSQSDHDHLVWELKHQAVEWPGLLSSWPSLQ
Query: MEEYKISSVERQSYSASGELLVKDEPENVISLAKKALSASKQAALLVDESEL-----VGTNLDYTSRDDSLSKEGRTVKSTRLQDRRSKKRKVPKHVTTI
E K+ +V S A EL +V++LA+KALSASKQAALLVD++E + +L TS SL ++G V+S R +RR+K R+ PK
Subjt: MEEYKISSVERQSYSASGELLVKDEPENVISLAKKALSASKQAALLVDESEL-----VGTNLDYTSRDDSLSKEGRTVKSTRLQDRRSKKRKVPKHVTTI
Query: HETSILKGKDSRRKTSENFDPNDPLRLFLWGPETKKLLTAQEESELIVQIQDLMILDNVKARLQSQFGREPTLVEWAEALGLTCQCLQSQLHSFRISREK
E + + +++K + D +D L+LFLWGPETK+LLTA+EE+ELI IQ L+ L+ VK +L+SQ G EPT+ EWAEA+G++ L+S +H R SREK
Subjt: HETSILKGKDSRRKTSENFDPNDPLRLFLWGPETKKLLTAQEESELIVQIQDLMILDNVKARLQSQFGREPTLVEWAEALGLTCQCLQSQLHSFRISREK
Query: LINANLRMVVHIAKQYQGRGLSLHDLLQATGHMHTEQSAKHAYSCGLLPKLECRALMTTSFVVQTHYPPHYTQSSSSQESYKPLNIELFVLRDWFRVQDS
LI ANLR+VVHIAKQYQ RGL+ DLLQ
Subjt: LINANLRMVVHIAKQYQGRGLSLHDLLQATGHMHTEQSAKHAYSCGLLPKLECRALMTTSFVVQTHYPPHYTQSSSSQESYKPLNIELFVLRDWFRVQDS
Query: CFNEGSLGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKAIFEHSRTIRLPENVYGLLGKVTEAKNYFVRAGNYKPSKEELAARVGITVERLDKLLFMSRI
EGS+GLMKSVEKFKPQ+GCRFATYAYWWIRQSIRK+IF++SRTIRLPENVY LLGKV+EA+ V+ GNY+PSKEELA VG++ E+LDKLL+ +R
Subjt: CFNEGSLGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKAIFEHSRTIRLPENVYGLLGKVTEAKNYFVRAGNYKPSKEELAARVGITVERLDKLLFMSRI
Query: PRSLQQPVWADQDTTFQDRKFNKDYYQKRENSTKIDLQVWYYFIAKFVKCWVTNEIHFITVIINKEAVLNAKENNDVRGRDHRDEITADSEVDTPDVSVE
P S+QQP+W+DQDTTFQ EIT DS ++TP +SV
Subjt: PRSLQQPVWADQDTTFQDRKFNKDYYQKRENSTKIDLQVWYYFIAKFVKCWVTNEIHFITVIINKEAVLNAKENNDVRGRDHRDEITADSEVDTPDVSVE
Query: RELMRRHIRNLLSILSPKERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAYADLL
++LMR H+RNLL++LSPKERRII+LRFGI+ GK+++L EIG ++GLSKERVRQLE+RALY+LK+ NS GL AYADLL
Subjt: RELMRRHIRNLLSILSPKERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAYADLL
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT1G08540.1 RNApolymerase sigma subunit 2 | 6.0e-49 | 27.45 | Show/hide |
Query: ERQSYSASGELLVKDEPENVISLAKKALSASKQAALLVDESELVGTNLDYTSRDDSLSKEGRTVKSTRLQDRRSKKRK-VPKHVTTIHETSILKGKDSRR
E++ G L V D N I K SAS + ++ ESE ++ S+S V+STR +R++++ K + K + I +R
Subjt: ERQSYSASGELLVKDEPENVISLAKKALSASKQAALLVDESELVGTNLDYTSRDDSLSKEGRTVKSTRLQDRRSKKRK-VPKHVTTIHETSILKGKDSRR
Query: KTSENFDPNDPLRLFLWGPETKKLLTAQEESELIVQIQDLMILDNVKARLQSQFGREPTLVEWAEALGLTCQCLQSQLHSFRISREKLINANLRMVVHIA
++ D NDPLR + KLLT +EE EL IQDL+ L+ ++ L + GR+PT +WA A G+ + L+ ++H + ++K+I +N+R+V+ IA
Subjt: KTSENFDPNDPLRLFLWGPETKKLLTAQEESELIVQIQDLMILDNVKARLQSQFGREPTLVEWAEALGLTCQCLQSQLHSFRISREKLINANLRMVVHIA
Query: KQYQGRGLSLHDLLQATGHMHTEQSAKHAYSCGLLPKLECRALMTTSFVVQTHYPPHYTQSSSSQESYKPLNIELFVLRDWFRVQDSCFNEGSLGLMKSV
K YQG G++L DL+Q EG GL++
Subjt: KQYQGRGLSLHDLLQATGHMHTEQSAKHAYSCGLLPKLECRALMTTSFVVQTHYPPHYTQSSSSQESYKPLNIELFVLRDWFRVQDSCFNEGSLGLMKSV
Query: EKFKPQAGCRFATYAYWWIRQSIRKAIFEHSRTIRLPENVYGLLGKVTEAKNYFVRAGNYKPSKEELAARVGITVERLDKLLFMSRIPRSLQQPVWADQD
EKF G +F+TYA+WWI+Q++RK++ + SR IRLP ++ +V EA+ P EE+A G++++RL +L + PRSL Q + +Q
Subjt: EKFKPQAGCRFATYAYWWIRQSIRKAIFEHSRTIRLPENVYGLLGKVTEAKNYFVRAGNYKPSKEELAARVGITVERLDKLLFMSRIPRSLQQPVWADQD
Query: TTFQDRKFNKDYYQKRENSTKIDLQVWYYFIAKFVKCWVTNEIHFITVIINKEAVLNAKENNDVRGRDHRDEITADSEVDTPDVSVERELMRRHIRNLLS
N K + E+ AD E T + + +E MR+ + +L
Subjt: TTFQDRKFNKDYYQKRENSTKIDLQVWYYFIAKFVKCWVTNEIHFITVIINKEAVLNAKENNDVRGRDHRDEITADSEVDTPDVSVERELMRRHIRNLLS
Query: ILSPKERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAY
L +E+++IR RFG+EDG+ KTL EIG M G+S+ERVRQ+E+ A KLK + L Y
Subjt: ILSPKERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAY
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| AT1G64860.1 sigma factor A | 8.2e-14 | 25.19 | Show/hide |
Query: GSLGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKAIFEHSRTIRLPENVYGLLGKVTEAKNYFVRAGNYKPSKEELAARVGITVERLDKLLFMSRIPRSL
G +GL++ +EKF G R +TY YWWIRQ + +A+ ++SRT+RLP +++ LG + AK G + +++R+ + L MS+
Subjt: GSLGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKAIFEHSRTIRLPENVYGLLGKVTEAKNYFVRAGNYKPSKEELAARVGITVERLDKLLFMSRIPRSL
Query: QQPVWADQDTTFQDRKFNKDYYQKRENSTKIDLQVWYYFIAKFVKCWVTNEIHFITVIINKEAVLNAKENNDVRGRDHRDEITADSEVDTPDVSVERELM
+K N+T+ +V+ ++++A + N + G H I + P + +
Subjt: QQPVWADQDTTFQDRKFNKDYYQKRENSTKIDLQVWYYFIAKFVKCWVTNEIHFITVIINKEAVLNAKENNDVRGRDHRDEITADSEVDTPDVSVERELM
Query: RRHIRNLLS-ILSPKERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGA
+ + L+S L +E+ IIRL +G+ D + T +I GLS+ERVRQ+ AL KLK + + A
Subjt: RRHIRNLLS-ILSPKERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGA
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| AT2G36990.1 RNApolymerase sigma-subunit F | 1.8e-130 | 43.81 | Show/hide |
Query: NVSMFHEQVTP-----------ARYFSTSFLSQEQHHECRPQSQILKDDITSQMTLDRRLIERSVSIDESSQSDHDHLVWELKHQAVEWPGLLSSWPSLQ
+V M H+Q T +R+F S LSQE E RP S L+DD TSQ+TL+RR + VS E + + +L H W L+S S
Subjt: NVSMFHEQVTP-----------ARYFSTSFLSQEQHHECRPQSQILKDDITSQMTLDRRLIERSVSIDESSQSDHDHLVWELKHQAVEWPGLLSSWPSLQ
Query: MEEYKISSVERQSYSASGELLVKDEPENVISLAKKALSASKQAALLVDESEL-----VGTNLDYTSRDDSLSKEGRTVKSTRLQDRRSKKRKVPKHVTTI
E K+ +V S A EL +V++LA+KALSASKQAALLVD++E + +L TS SL ++G V+S R +RR+K R+ PK
Subjt: MEEYKISSVERQSYSASGELLVKDEPENVISLAKKALSASKQAALLVDESEL-----VGTNLDYTSRDDSLSKEGRTVKSTRLQDRRSKKRKVPKHVTTI
Query: HETSILKGKDSRRKTSENFDPNDPLRLFLWGPETKKLLTAQEESELIVQIQDLMILDNVKARLQSQFGREPTLVEWAEALGLTCQCLQSQLHSFRISREK
E + + +++K + D +D L+LFLWGPETK+LLTA+EE+ELI IQ L+ L+ VK +L+SQ G EPT+ EWAEA+G++ L+S +H R SREK
Subjt: HETSILKGKDSRRKTSENFDPNDPLRLFLWGPETKKLLTAQEESELIVQIQDLMILDNVKARLQSQFGREPTLVEWAEALGLTCQCLQSQLHSFRISREK
Query: LINANLRMVVHIAKQYQGRGLSLHDLLQATGHMHTEQSAKHAYSCGLLPKLECRALMTTSFVVQTHYPPHYTQSSSSQESYKPLNIELFVLRDWFRVQDS
LI ANLR+VVHIAKQYQ RGL+ DLLQ
Subjt: LINANLRMVVHIAKQYQGRGLSLHDLLQATGHMHTEQSAKHAYSCGLLPKLECRALMTTSFVVQTHYPPHYTQSSSSQESYKPLNIELFVLRDWFRVQDS
Query: CFNEGSLGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKAIFEHSRTIRLPENVYGLLGKVTEAKNYFVRAGNYKPSKEELAARVGITVERLDKLLFMSRI
EGS+GLMKSVEKFKPQ+GCRFATYAYWWIRQSIRK+IF++SRTIRLPENVY LLGKV+EA+ V+ GNY+PSKEELA VG++ E+LDKLL+ +R
Subjt: CFNEGSLGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKAIFEHSRTIRLPENVYGLLGKVTEAKNYFVRAGNYKPSKEELAARVGITVERLDKLLFMSRI
Query: PRSLQQPVWADQDTTFQDRKFNKDYYQKRENSTKIDLQVWYYFIAKFVKCWVTNEIHFITVIINKEAVLNAKENNDVRGRDHRDEITADSEVDTPDVSVE
P S+QQP+W+DQDTTFQ EIT DS ++TP +SV
Subjt: PRSLQQPVWADQDTTFQDRKFNKDYYQKRENSTKIDLQVWYYFIAKFVKCWVTNEIHFITVIINKEAVLNAKENNDVRGRDHRDEITADSEVDTPDVSVE
Query: RELMRRHIRNLLSILSPKERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAYADLL
++LMR H+RNLL++LSPKERRII+LRFGI+ GK+++L EIG ++GLSKERVRQLE+RALY+LK+ NS GL AYADLL
Subjt: RELMRRHIRNLLSILSPKERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAYADLL
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| AT3G53920.1 RNApolymerase sigma-subunit C | 5.9e-12 | 38.89 | Show/hide |
Query: EITADSEVDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAY
E T D+ +++P+ +V R+ RR I +LL L P+E++++ LR+G++D + K+L EIG + +SKE +R++E RA+ KL+ N++ L Y
Subjt: EITADSEVDTPDVSVERELMRRHIRNLLSILSPKERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAY
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| AT3G53920.1 RNApolymerase sigma-subunit C | 1.6e-06 | 25.47 | Show/hide |
Query: KKLLTAQEESELIVQIQDLMILDNVKARLQSQFGREPTLVEWAEALGLTCQCLQSQLHSFRISREKLINANLRMVVHIAKQYQGRGLSLHDLLQATGHMH
K+ ++ E+E+ ++ + ++ ++ +L+ + G+ +L WA A G+ + L LH R++L+ + +V+ +A+ Y+G G++ DL+QA G++
Subjt: KKLLTAQEESELIVQIQDLMILDNVKARLQSQFGREPTLVEWAEALGLTCQCLQSQLHSFRISREKLINANLRMVVHIAKQYQGRGLSLHDLLQATGHMH
Query: TEQSAK
Q A+
Subjt: TEQSAK
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| AT5G13730.1 sigma factor 4 | 4.3e-23 | 28.78 | Show/hide |
Query: EGSLGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKAIFEHSRTIRLPENVYGLLGKVTEAKNYFVRAGNYKPSKEELAARVGITVERLDKLLFMSRIPRS
EGS+GL++ E+F P G + +TY YWWI+Q+I +AI SR ++LP +++ L KV EA N R +PS EE+A + + V + + SR P S
Subjt: EGSLGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKAIFEHSRTIRLPENVYGLLGKVTEAKNYFVRAGNYKPSKEELAARVGITVERLDKLLFMSRIPRS
Query: LQQPVWADQDTTFQDRKFNKDYYQKRENSTKIDLQVWYYFIAKFVKCWVTNEIHFITVIINKEAVLNAKENNDVRGRDHRDEITADSEVDTPDVSVEREL
L + A +N GR EI + P+ V+RE
Subjt: LQQPVWADQDTTFQDRKFNKDYYQKRENSTKIDLQVWYYFIAKFVKCWVTNEIHFITVIINKEAVLNAKENNDVRGRDHRDEITADSEVDTPDVSVEREL
Query: MRRHIRNLLSILSPKERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAY
M+ I LL L+ +E R++ L FG+ + EIG LS+ERVRQ+ AL KL+ N L Y
Subjt: MRRHIRNLLSILSPKERRIIRLRFGIEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAY
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