; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi01G013210 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G013210
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr01:11458175..11458997
RNA-Seq ExpressionLsi01G013210
SyntenyLsi01G013210
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047240.1 hypothetical protein E6C27_scaffold908G00330 [Cucumis melo var. makuwa]5.0e-3288.64Show/hide
Query:  MKFLVLILSIMVLSYTCSATSRRIALGGLHGQGNQYLFKQAQTAEENNSRKSNFKHPESGISNHHSLPREYFNDSQGND----NGGSG
        MKFLVLILS M+LSYTCSATSRRIALGGLHGQGNQY FKQAQ  EENNSRKSNFKHPESGISNHHSLPREYFN+SQGND    NGGSG
Subjt:  MKFLVLILSIMVLSYTCSATSRRIALGGLHGQGNQYLFKQAQTAEENNSRKSNFKHPESGISNHHSLPREYFNDSQGND----NGGSG

KAE8647398.1 hypothetical protein Csa_003831 [Cucumis sativus]1.0e-3278.1Show/hide
Query:  MKFLVLILSIMVLSYTCSATSRRIALGGLHGQGNQYLFKQAQTAEENNSRKSNFKHPESGISNHHSLPREYFNDSQGND----NGGSGSSCSYVPWSRQG
        MKFLVLILS+M+LSYTCSATSRRIALGGLHGQGNQY FKQAQ  EENNSRKSNFKHPESG+SNHHSLPREYFN+SQGND    NGGSG    +     Q 
Subjt:  MKFLVLILSIMVLSYTCSATSRRIALGGLHGQGNQYLFKQAQTAEENNSRKSNFKHPESGISNHHSLPREYFNDSQGND----NGGSGSSCSYVPWSRQG

Query:  MKVEG
        M+VEG
Subjt:  MKVEG

KAG6604413.1 hypothetical protein SDJN03_05022, partial [Cucurbita argyrosperma subsp. sororia]5.8e-2871.43Show/hide
Query:  MKFLVLILSIMVLSYTCSATSRRIALGGLHGQGNQYLFKQAQTAEENNSRKSNFKHPESGISNHHSLPREYFND----SQGNDNGGSGSSCSYVPWSRQG
        MKFLVLILS+M+LSYTCS TSRRIAL G H QGNQ+  KQA+TAEEN SRKSNFKHPESGISNHHSLPREYFN+    SQGNDNG           SRQG
Subjt:  MKFLVLILSIMVLSYTCSATSRRIALGGLHGQGNQYLFKQAQTAEENNSRKSNFKHPESGISNHHSLPREYFND----SQGNDNGGSGSSCSYVPWSRQG

Query:  MKVEG
         + EG
Subjt:  MKVEG

POO01696.1 hypothetical protein TorRG33x02_024730 [Trema orientale]2.1e-0645.56Show/hide
Query:  MKFLVLILSIMVLSYTCSATSRRIALGGLHGQGNQYLFKQAQTAEENNSRK-SNFKHPESGISNHHSLPREYFNDSQGNDNG-GSGSSCS
        MK   LIL I++++ TC A   R  LGG++GQ  +Y   + +T E N   K S+ K+PE  I+NHHS+PR+Y+ND  GN  G GS +S S
Subjt:  MKFLVLILSIMVLSYTCSATSRRIALGGLHGQGNQYLFKQAQTAEENNSRK-SNFKHPESGISNHHSLPREYFNDSQGNDNG-GSGSSCS

XP_030925042.1 uncharacterized protein LOC115952101 [Quercus lobata]1.1e-0542.17Show/hide
Query:  LVLILSIMVLSYTCSATSRRIALGGLHGQGNQYLFKQAQTAEENNSRKSNFKHPESGISNHHSLPREYFNDSQGNDNGGSGSS
        +VL L IMV+S +C A  RR  LGG++GQ  Q    Q + A E++  +S  ++P+S I+NHH++PR+ FN   G+  G +G S
Subjt:  LVLILSIMVLSYTCSATSRRIALGGLHGQGNQYLFKQAQTAEENNSRKSNFKHPESGISNHHSLPREYFNDSQGNDNGGSGSS

TrEMBL top hitse value%identityAlignment
A0A0A0KK82 Uncharacterized protein1.9e-3287.5Show/hide
Query:  MKFLVLILSIMVLSYTCSATSRRIALGGLHGQGNQYLFKQAQTAEENNSRKSNFKHPESGISNHHSLPREYFNDSQGND----NGGSG
        MKFLVLILS+M+LSYTCSATSRRIALGGLHGQGNQY FKQAQ  EENNSRKSNFKHPESG+SNHHSLPREYFN+SQGND    NGGSG
Subjt:  MKFLVLILSIMVLSYTCSATSRRIALGGLHGQGNQYLFKQAQTAEENNSRKSNFKHPESGISNHHSLPREYFNDSQGND----NGGSG

A0A2P5CH57 Uncharacterized protein3.3e-0543.33Show/hide
Query:  MKFLVLILSIMVLSYTCSATSRRIALGGLHGQGNQYLFKQAQTAEENNSRK-SNFKHPESGISNHHSLPREYFNDSQGNDNG-GSGSSCS
        MK   L L I++++ TC A  RR  L G++GQ  +Y   + +T E N   K S+ K+ E  I+NHHS+PR+Y+ND  GN  G GS +S S
Subjt:  MKFLVLILSIMVLSYTCSATSRRIALGGLHGQGNQYLFKQAQTAEENNSRK-SNFKHPESGISNHHSLPREYFNDSQGNDNG-GSGSSCS

A0A2P5FV74 Uncharacterized protein1.0e-0645.56Show/hide
Query:  MKFLVLILSIMVLSYTCSATSRRIALGGLHGQGNQYLFKQAQTAEENNSRK-SNFKHPESGISNHHSLPREYFNDSQGNDNG-GSGSSCS
        MK   LIL I++++ TC A   R  LGG++GQ  +Y   + +T E N   K S+ K+PE  I+NHHS+PR+Y+ND  GN  G GS +S S
Subjt:  MKFLVLILSIMVLSYTCSATSRRIALGGLHGQGNQYLFKQAQTAEENNSRK-SNFKHPESGISNHHSLPREYFNDSQGNDNG-GSGSSCS

A0A5A7TVP9 Uncharacterized protein2.4e-3288.64Show/hide
Query:  MKFLVLILSIMVLSYTCSATSRRIALGGLHGQGNQYLFKQAQTAEENNSRKSNFKHPESGISNHHSLPREYFNDSQGND----NGGSG
        MKFLVLILS M+LSYTCSATSRRIALGGLHGQGNQY FKQAQ  EENNSRKSNFKHPESGISNHHSLPREYFN+SQGND    NGGSG
Subjt:  MKFLVLILSIMVLSYTCSATSRRIALGGLHGQGNQYLFKQAQTAEENNSRKSNFKHPESGISNHHSLPREYFNDSQGND----NGGSG

A0A7N2M795 Uncharacterized protein4.6e-0743.02Show/hide
Query:  MKFLVLILSIMVLSYTCSATSRRIALGGLHGQGNQYLFKQAQTAEENNSRKSNFKHPESGISNHHSLPREYFNDSQGNDNGGSGSS
        MK +VL L IMV+S +C A  RR  LGG++GQ  Q    Q + A E++  +S  ++P+S I+NHH++PR+ FN   G+  G +G S
Subjt:  MKFLVLILSIMVLSYTCSATSRRIALGGLHGQGNQYLFKQAQTAEENNSRKSNFKHPESGISNHHSLPREYFNDSQGNDNGGSGSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTTCTTAGTACTTATCTTATCAATTATGGTATTGAGCTACACTTGCTCGGCGACTTCAAGAAGGATTGCTTTGGGAGGACTTCATGGACAAGGAAACCAATATCT
CTTCAAGCAAGCACAAACAGCTGAAGAAAATAACAGCAGAAAGAGCAACTTCAAGCACCCAGAAAGTGGCATTAGCAACCATCACTCATTGCCTAGAGAGTACTTCAACG
ACTCGCAAGGAAATGACAATGGTGGAAGTGGCTCTTCATGTTCCTATGTTCCATGGAGTAGGCAGGGTATGAAGGTAGAGGGAGAAGATACGCGAGTGGTTGTGTTCTTC
AGTAGAGGTAAAACATTAGTAACCATGGAGATTGGAGATATTCGCTCAAGGCGTATGCTGATTTCTCCTCCATCCGAGCAATTAGCTCCAACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGTTCTTAGTACTTATCTTATCAATTATGGTATTGAGCTACACTTGCTCGGCGACTTCAAGAAGGATTGCTTTGGGAGGACTTCATGGACAAGGAAACCAATATCT
CTTCAAGCAAGCACAAACAGCTGAAGAAAATAACAGCAGAAAGAGCAACTTCAAGCACCCAGAAAGTGGCATTAGCAACCATCACTCATTGCCTAGAGAGTACTTCAACG
ACTCGCAAGGAAATGACAATGGTGGAAGTGGCTCTTCATGTTCCTATGTTCCATGGAGTAGGCAGGGTATGAAGGTAGAGGGAGAAGATACGCGAGTGGTTGTGTTCTTC
AGTAGAGGTAAAACATTAGTAACCATGGAGATTGGAGATATTCGCTCAAGGCGTATGCTGATTTCTCCTCCATCCGAGCAATTAGCTCCAACTTGA
Protein sequenceShow/hide protein sequence
MKFLVLILSIMVLSYTCSATSRRIALGGLHGQGNQYLFKQAQTAEENNSRKSNFKHPESGISNHHSLPREYFNDSQGNDNGGSGSSCSYVPWSRQGMKVEGEDTRVVVFF
SRGKTLVTMEIGDIRSRRMLISPPSEQLAPT