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Lsi01G013220 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G013220
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr01:11468738..11474371
RNA-Seq ExpressionLsi01G013220
SyntenyLsi01G013220
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXC16195.1 hypothetical protein L484_024366 [Morus notabilis]1.1e-0660.87Show/hide
Query:  SFDEIKLILCLIQQCLEQRVIEKANFDYKPSVILTHIDNQVTLWDV
        S  E+KLI  L++QCLE+RVIE+ +FD KP V+L +ID+QVTLWD+
Subjt:  SFDEIKLILCLIQQCLEQRVIEKANFDYKPSVILTHIDNQVTLWDV

KAA0047241.1 hypothetical protein E6C27_scaffold908G00340 [Cucumis melo var. makuwa]1.0e-2361.06Show/hide
Query:  MNKSNSTATYLQRRRGICRLSGEL--ARRTTLRKRFSSQGMQSFDEIKLILCLIQQCLEQRVIEKANFDYKPSVILTHIDNQVTLWDVSRNEAILMQGRP
        M   N+ ++  QR   + R +  +   +   L  R +  G++S  EIKLILCLIQQCLEQRVIEKANFDYKPS+ILT+IDNQVTL DVS +EAILMQ RP
Subjt:  MNKSNSTATYLQRRRGICRLSGEL--ARRTTLRKRFSSQGMQSFDEIKLILCLIQQCLEQRVIEKANFDYKPSVILTHIDNQVTLWDVSRNEAILMQGRP

Query:  QNPLAAVLAGCTR
        QNPLAAVL GC R
Subjt:  QNPLAAVLAGCTR

KAE8647397.1 hypothetical protein Csa_003472 [Cucumis sativus]5.1e-3164.62Show/hide
Query:  MNKSNSTATYLQRRRGICRLSGEL--ARRTTLRKRFSSQGMQSFDEIKLILCLIQQCLEQRVIEKANFDYKPSVILTHIDNQVTLWDVSRNEAILMQGRP
        M   N+ ++  QR   + R +  +   +   L  R +  G+ S  EIKLILCLIQQCLEQRVIEKANFDYKPS+ILTHIDNQVTL DVSR+EAILMQGRP
Subjt:  MNKSNSTATYLQRRRGICRLSGEL--ARRTTLRKRFSSQGMQSFDEIKLILCLIQQCLEQRVIEKANFDYKPSVILTHIDNQVTLWDVSRNEAILMQGRP

Query:  QNPLAAVLAGCTRGSSCIAIHFSFICCRWF
        QNPLAAVL GC R SSC  IHFSFIC R F
Subjt:  QNPLAAVLAGCTRGSSCIAIHFSFICCRWF

KAF8403084.1 hypothetical protein HHK36_011178 [Tetracentron sinense]3.9e-0742.65Show/hide
Query:  EIKLILCLIQQCLEQRVIEKANFDYKPSVILTHIDNQVTLWDVSRNEAILMQGRPQNPLAAVLAGCTR
        E+ L+L LI+QCL++R++E+ANFD KP ++ T+ID Q+TL D+  +  + +Q  PQ+P + ++  C R
Subjt:  EIKLILCLIQQCLEQRVIEKANFDYKPSVILTHIDNQVTLWDVSRNEAILMQGRPQNPLAAVLAGCTR

TYK05877.1 hypothetical protein E5676_scaffold432G00080 [Cucumis melo var. makuwa]6.0e-2445.73Show/hide
Query:  MNKSNSTATYLQRRRGICRLSGEL--ARRTTLRKRFSSQGMQSFDEIKLILCLIQQCLEQRVIEKANFDYKPSVILTHIDNQVTLWDVSRNEAILMQGRP
        M   N+ ++  QR   + R +  +   +   L  R +  G++S  EIKLILCLIQQCLEQRVIEKANFDYKPS+ILT+IDNQVTL DVS +EAILMQ RP
Subjt:  MNKSNSTATYLQRRRGICRLSGEL--ARRTTLRKRFSSQGMQSFDEIKLILCLIQQCLEQRVIEKANFDYKPSVILTHIDNQVTLWDVSRNEAILMQGRP

Query:  QNPLAAVLAGCTRGSSCIAIHFSFICCRWFWDKLLCSITSGSRYVKLEYLYMEKLLQEKGDKAR
        QNPLAAVL GC R        ++F     ++   +C+ +     + ++Y+ +    + K D+ R
Subjt:  QNPLAAVLAGCTRGSSCIAIHFSFICCRWFWDKLLCSITSGSRYVKLEYLYMEKLLQEKGDKAR

TrEMBL top hitse value%identityAlignment
A0A0A0KEQ0 Uncharacterized protein2.5e-3164.62Show/hide
Query:  MNKSNSTATYLQRRRGICRLSGEL--ARRTTLRKRFSSQGMQSFDEIKLILCLIQQCLEQRVIEKANFDYKPSVILTHIDNQVTLWDVSRNEAILMQGRP
        M   N+ ++  QR   + R +  +   +   L  R +  G+ S  EIKLILCLIQQCLEQRVIEKANFDYKPS+ILTHIDNQVTL DVSR+EAILMQGRP
Subjt:  MNKSNSTATYLQRRRGICRLSGEL--ARRTTLRKRFSSQGMQSFDEIKLILCLIQQCLEQRVIEKANFDYKPSVILTHIDNQVTLWDVSRNEAILMQGRP

Query:  QNPLAAVLAGCTRGSSCIAIHFSFICCRWF
        QNPLAAVL GC R SSC  IHFSFIC R F
Subjt:  QNPLAAVLAGCTRGSSCIAIHFSFICCRWF

A0A151TV08 Uncharacterized protein (Fragment)3.3e-0445.76Show/hide
Query:  DEIKLILCLIQQCLEQRVIEKANFDYKPSVILTHIDNQVTLWDVSRNEAILMQGRPQNP
        +EI LIL LIQQ LE+R++E+ N D    ++L+H+ NQVTLW +  +    M G P  P
Subjt:  DEIKLILCLIQQCLEQRVIEKANFDYKPSVILTHIDNQVTLWDVSRNEAILMQGRPQNP

A0A5A7U0W9 Uncharacterized protein5.0e-2461.06Show/hide
Query:  MNKSNSTATYLQRRRGICRLSGEL--ARRTTLRKRFSSQGMQSFDEIKLILCLIQQCLEQRVIEKANFDYKPSVILTHIDNQVTLWDVSRNEAILMQGRP
        M   N+ ++  QR   + R +  +   +   L  R +  G++S  EIKLILCLIQQCLEQRVIEKANFDYKPS+ILT+IDNQVTL DVS +EAILMQ RP
Subjt:  MNKSNSTATYLQRRRGICRLSGEL--ARRTTLRKRFSSQGMQSFDEIKLILCLIQQCLEQRVIEKANFDYKPSVILTHIDNQVTLWDVSRNEAILMQGRP

Query:  QNPLAAVLAGCTR
        QNPLAAVL GC R
Subjt:  QNPLAAVLAGCTR

A0A5D3C230 Uncharacterized protein2.9e-2445.73Show/hide
Query:  MNKSNSTATYLQRRRGICRLSGEL--ARRTTLRKRFSSQGMQSFDEIKLILCLIQQCLEQRVIEKANFDYKPSVILTHIDNQVTLWDVSRNEAILMQGRP
        M   N+ ++  QR   + R +  +   +   L  R +  G++S  EIKLILCLIQQCLEQRVIEKANFDYKPS+ILT+IDNQVTL DVS +EAILMQ RP
Subjt:  MNKSNSTATYLQRRRGICRLSGEL--ARRTTLRKRFSSQGMQSFDEIKLILCLIQQCLEQRVIEKANFDYKPSVILTHIDNQVTLWDVSRNEAILMQGRP

Query:  QNPLAAVLAGCTRGSSCIAIHFSFICCRWFWDKLLCSITSGSRYVKLEYLYMEKLLQEKGDKAR
        QNPLAAVL GC R        ++F     ++   +C+ +     + ++Y+ +    + K D+ R
Subjt:  QNPLAAVLAGCTRGSSCIAIHFSFICCRWFWDKLLCSITSGSRYVKLEYLYMEKLLQEKGDKAR

W9RWZ4 Uncharacterized protein5.5e-0760.87Show/hide
Query:  SFDEIKLILCLIQQCLEQRVIEKANFDYKPSVILTHIDNQVTLWDV
        S  E+KLI  L++QCLE+RVIE+ +FD KP V+L +ID+QVTLWD+
Subjt:  SFDEIKLILCLIQQCLEQRVIEKANFDYKPSVILTHIDNQVTLWDV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATCGCATTCATGAATAAATCAAATTCGACAGCAACCTATCTTCAAAGACGCAGAGGGATTTGTCGGTTATCAGGTGAGCTAGCGAGGCGGACAACACTAAGGAAAAGGTT
CTCATCACAAGGAATGCAGAGTTTTGATGAAATCAAACTCATCTTGTGCTTGATCCAGCAATGCCTTGAACAAAGGGTGATTGAGAAGGCTAATTTTGATTACAAACCTT
CTGTTATTCTCACCCACATAGACAACCAAGTGACCCTTTGGGACGTCTCGCGGAATGAAGCAATCCTCATGCAAGGGAGACCACAAAATCCATTGGCAGCAGTGCTCGCA
GGCTGTACAAGAGGAAGCAGCTGCATTGCCATCCATTTTTCTTTCATCTGCTGCAGATGGTTTTGGGATAAGCTTCTCTGCAGCATCACATCTGGGAGCAGATATGTGAA
GCTTGAATATCTATATATGGAGAAACTCTTGCAAGAAAAAGGAGACAAAGCAAGAGGCAAGTCATAA
mRNA sequenceShow/hide mRNA sequence
ATCGCATTCATGAATAAATCAAATTCGACAGCAACCTATCTTCAAAGACGCAGAGGGATTTGTCGGTTATCAGGTGAGCTAGCGAGGCGGACAACACTAAGGAAAAGGTT
CTCATCACAAGGAATGCAGAGTTTTGATGAAATCAAACTCATCTTGTGCTTGATCCAGCAATGCCTTGAACAAAGGGTGATTGAGAAGGCTAATTTTGATTACAAACCTT
CTGTTATTCTCACCCACATAGACAACCAAGTGACCCTTTGGGACGTCTCGCGGAATGAAGCAATCCTCATGCAAGGGAGACCACAAAATCCATTGGCAGCAGTGCTCGCA
GGCTGTACAAGAGGAAGCAGCTGCATTGCCATCCATTTTTCTTTCATCTGCTGCAGATGGTTTTGGGATAAGCTTCTCTGCAGCATCACATCTGGGAGCAGATATGTGAA
GCTTGAATATCTATATATGGAGAAACTCTTGCAAGAAAAAGGAGACAAAGCAAGAGGCAAGTCATAA
Protein sequenceShow/hide protein sequence
IAFMNKSNSTATYLQRRRGICRLSGELARRTTLRKRFSSQGMQSFDEIKLILCLIQQCLEQRVIEKANFDYKPSVILTHIDNQVTLWDVSRNEAILMQGRPQNPLAAVLA
GCTRGSSCIAIHFSFICCRWFWDKLLCSITSGSRYVKLEYLYMEKLLQEKGDKARGKS