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Lsi01G013230 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G013230
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionAuxin responsive SAUR protein
Genome locationchr01:11471806..11472180
RNA-Seq ExpressionLsi01G013230
SyntenyLsi01G013230
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595237.1 Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia]5.0e-6094.74Show/hide
Query:  MKGRFIRACANKWRKIGSKVVPCTACEHCCQWILWSPLHEDCFIPRDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCD
        MKG+FIRACANKWRK+GSKVVPCT CEHCCQW+LWSPLHEDCFIPRDVPKGHLVVYVGEN RRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCD
Subjt:  MKGRFIRACANKWRKIGSKVVPCTACEHCCQWILWSPLHEDCFIPRDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCD

Query:  ENLFLSVVRLASSP
        ENLFLSVVR ASSP
Subjt:  ENLFLSVVRLASSP

KAG6604414.1 Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia]3.5e-6191.06Show/hide
Query:  MKGRFIRACANKWRKIGSKVVPCTACEHCCQWILWSPLHEDCFIPRDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCD
        MKG FIRACANKWRKIGSKVVPC ACE CCQW+LWS LHEDCFIPRDVPKGHLVVYVGENNRR VIKISLLNHPLFKALLDQAQDEFDFT NSKLCIPCD
Subjt:  MKGRFIRACANKWRKIGSKVVPCTACEHCCQWILWSPLHEDCFIPRDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCD

Query:  ENLFLSVVRLASSPDNRQIPLRL
        ENLFLSVVR A+SPDNRQ PL L
Subjt:  ENLFLSVVRLASSPDNRQIPLRL

XP_016900724.1 PREDICTED: indole-3-acetic acid-induced protein ARG7 [Cucumis melo]1.8e-6595.16Show/hide
Query:  MMKGRFIRACANKWRKIGSKVVPCTACEHCCQWILWSPLHEDCFIPRDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPC
        M KGRFIRACANKWRKIGSKVVPCTACEHCCQW+LWSPLHEDCFIPRDVPKGHLVVYVGEN RRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPC
Subjt:  MMKGRFIRACANKWRKIGSKVVPCTACEHCCQWILWSPLHEDCFIPRDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPC

Query:  DENLFLSVVRLASSPDNRQIPLRL
        DENLFLSVV  AS+PDNRQIPLRL
Subjt:  DENLFLSVVRLASSPDNRQIPLRL

XP_022963217.1 auxin-induced protein 15A [Cucurbita moschata]1.9e-5993.86Show/hide
Query:  MKGRFIRACANKWRKIGSKVVPCTACEHCCQWILWSPLHEDCFIPRDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCD
        MKG+FIRACANKWRK+GSKVVPCT CEHCCQW+LWSPLHEDCFIPRDVPKGHLVVYVGEN RRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCD
Subjt:  MKGRFIRACANKWRKIGSKVVPCTACEHCCQWILWSPLHEDCFIPRDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCD

Query:  ENLFLSVVRLASSP
        ENLFLSVV  ASSP
Subjt:  ENLFLSVVRLASSP

XP_038883934.1 auxin-responsive protein SAUR50 [Benincasa hispida]9.4e-6796.77Show/hide
Query:  MMKGRFIRACANKWRKIGSKVVPCTACEHCCQWILWSPLHEDCFIPRDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPC
        M KGRFIRACANKWRKIGSKVVPCTACEHCCQW+LWSPLHEDCFIPRDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPC
Subjt:  MMKGRFIRACANKWRKIGSKVVPCTACEHCCQWILWSPLHEDCFIPRDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPC

Query:  DENLFLSVVRLASSPDNRQIPLRL
        DENLFLSVVR ASSPDNRQIPL L
Subjt:  DENLFLSVVRLASSPDNRQIPLRL

TrEMBL top hitse value%identityAlignment
A0A1S4DXL1 indole-3-acetic acid-induced protein ARG78.6e-6695.16Show/hide
Query:  MMKGRFIRACANKWRKIGSKVVPCTACEHCCQWILWSPLHEDCFIPRDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPC
        M KGRFIRACANKWRKIGSKVVPCTACEHCCQW+LWSPLHEDCFIPRDVPKGHLVVYVGEN RRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPC
Subjt:  MMKGRFIRACANKWRKIGSKVVPCTACEHCCQWILWSPLHEDCFIPRDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPC

Query:  DENLFLSVVRLASSPDNRQIPLRL
        DENLFLSVV  AS+PDNRQIPLRL
Subjt:  DENLFLSVVRLASSPDNRQIPLRL

A0A2N9EJG5 Uncharacterized protein1.0e-5074.19Show/hide
Query:  MMKGRFIRACANKWRKIGSKVVPCTACEHCCQWILWSPLHEDCFIPRDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPC
        +MKG+ +R C NKWRK+GS+V PC ACE+CCQW  W   HE+  IP+DVPKGHLVVYVGEN +RFVIKI+LLNHPLFKALLDQA+DE+DFT +SKLCIPC
Subjt:  MMKGRFIRACANKWRKIGSKVVPCTACEHCCQWILWSPLHEDCFIPRDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPC

Query:  DENLFLSVVRLASSPDNRQIPLRL
        DENLFLSVVR ASSP++R+IPL L
Subjt:  DENLFLSVVRLASSPDNRQIPLRL

A0A6J1CQ37 uncharacterized protein LOC1110136977.8e-5994.64Show/hide
Query:  MKGRFIRACANKWRKIGSKVVPCTACEHCCQWILWSPLHEDCFIPRDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCD
        MKGRFIRAC NKWRKIGSKVVPCTACEHCCQW+LWSPLHEDCFIP DVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCD
Subjt:  MKGRFIRACANKWRKIGSKVVPCTACEHCCQWILWSPLHEDCFIPRDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCD

Query:  ENLFLSVVRLAS
        E+LFLSVV  AS
Subjt:  ENLFLSVVRLAS

A0A6J1HEL5 auxin-induced protein 15A9.2e-6093.86Show/hide
Query:  MKGRFIRACANKWRKIGSKVVPCTACEHCCQWILWSPLHEDCFIPRDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCD
        MKG+FIRACANKWRK+GSKVVPCT CEHCCQW+LWSPLHEDCFIPRDVPKGHLVVYVGEN RRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCD
Subjt:  MKGRFIRACANKWRKIGSKVVPCTACEHCCQWILWSPLHEDCFIPRDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCD

Query:  ENLFLSVVRLASSP
        ENLFLSVV  ASSP
Subjt:  ENLFLSVVRLASSP

A0A6J1I941 auxin-induced protein 15A-like1.3e-5892.92Show/hide
Query:  MKGRFIRACANKWRKIGSKVVPCTACEHCCQWILWSPLHEDCFIPRDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCD
        MKG+FIRACANKWRK+GSKVVPCT CEHCCQW+LWSPLHEDCFIPRDVPKGHLVVYVGEN RRFVIKISLLNHPLFKALLDQAQDEFDFT+NSKLCIPCD
Subjt:  MKGRFIRACANKWRKIGSKVVPCTACEHCCQWILWSPLHEDCFIPRDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCD

Query:  ENLFLSVVRLASS
        ENLFLSVV  ASS
Subjt:  ENLFLSVVRLASS

SwissProt top hitse value%identityAlignment
O65695 Auxin-responsive protein SAUR506.7e-1550.7Show/hide
Query:  EDCFIPRDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCDENLFLSVVRL
        EDC +P DVPKGH  VYVGEN  R+++ IS L HP F++LL +A++EF F  +  L IPCDE +F ++  +
Subjt:  EDCFIPRDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCDENLFLSVVRL

P0DKL1 Auxin-responsive protein SAUR507.4e-1448.53Show/hide
Query:  HEDCFIPRDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCDENLFLS
        ++D  +P DVPKGH VVYVGE   R+++ IS L+HP F+ LL ++++EF F  +  + IPC E  FLS
Subjt:  HEDCFIPRDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCDENLFLS

P32295 Indole-3-acetic acid-induced protein ARG76.9e-1251.47Show/hide
Query:  DVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFT-ANSKLCIPCDENLFLSVVRLASS
        D PKG+L VYVGEN +RFVI +S LN PLF+ LL QA++EF +      L IPC E+LF  +    S+
Subjt:  DVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFT-ANSKLCIPCDENLFLSVVRLASS

P33080 Auxin-induced protein X10A1.0e-1053.23Show/hide
Query:  DVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFT-ANSKLCIPCDENLFLSV
        +VPKG+LVVYVG+  RRF+I +S LN P F+ LL+QA++EF +      L IPC E+ FL+V
Subjt:  DVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFT-ANSKLCIPCDENLFLSV

Q9SL45 Protein SMALL AUXIN UP-REGULATED RNA 102.4e-1247.76Show/hide
Query:  IPRDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCDENLFLSVVRL
        +P+DVPKGH  VYVG N  R+++ IS L+H  F+ LL  A++EF F  +  L IPCDE  F S++ +
Subjt:  IPRDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCDENLFLSVVRL

Arabidopsis top hitse value%identityAlignment
AT1G75590.1 SAUR-like auxin-responsive protein family6.2e-1646.58Show/hide
Query:  IPRDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCDENLFLSVVRLASSPDN
        +P DVP GH+ VYVG + RRFV++ + LNHP+ + LL QA++EF F     L IPC+E++F   +R  S  D+
Subjt:  IPRDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCDENLFLSVVRLASSPDN

AT2G37030.1 SAUR-like auxin-responsive protein family4.6e-3557.63Show/hide
Query:  MKGRFIRACANKWRKIGSKV-VPCTACEHCCQWILWSPLHEDCFIPRDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPC
        MK +FI++C  K +K+ SKV +PC +CE C + I W+   E   IPRDVPKGHLVVYVGE  +RFVI I+LL HPLF+ALLDQAQD + F+A+S+L IPC
Subjt:  MKGRFIRACANKWRKIGSKV-VPCTACEHCCQWILWSPLHEDCFIPRDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPC

Query:  DENLFLSVVRLASSPDNR
        +E+ FL VVR A +P ++
Subjt:  DENLFLSVVRLASSPDNR

AT3G53250.1 SAUR-like auxin-responsive protein family2.4e-2854.72Show/hide
Query:  KIGSKVVPC--TACEHCCQWILWSPLHEDCFIPRDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCDENLFLSVVRLAS
        K  S V+PC  ++CE CC  + W    E+  IP+DVP+GHLVVYVG++ +RFVIK+SLL HP+FKALLDQAQD ++   +S+L IPCDEN FL VVR + 
Subjt:  KIGSKVVPC--TACEHCCQWILWSPLHEDCFIPRDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCDENLFLSVVRLAS

Query:  SPDNRQ
        +P +++
Subjt:  SPDNRQ

AT4G34760.1 SAUR-like auxin-responsive protein family4.7e-1650.7Show/hide
Query:  EDCFIPRDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCDENLFLSVVRL
        EDC +P DVPKGH  VYVGEN  R+++ IS L HP F++LL +A++EF F  +  L IPCDE +F ++  +
Subjt:  EDCFIPRDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCDENLFLSVVRL

AT5G03310.1 SAUR-like auxin-responsive protein family7.1e-2066.67Show/hide
Query:  IPRDVPKGHLVVYVG---ENNRRFVIKISLLNHPLFKALLDQAQDEF--DFTA-NSKLCIPCDENLFLSVVRLAS
        IP DVPKGHLVVYVG   E  +RFVIKI+LL+ P+F+ALLDQ++DE   DFT+ +SKLCI CDE LFL V+R AS
Subjt:  IPRDVPKGHLVVYVG---ENNRRFVIKISLLNHPLFKALLDQAQDEF--DFTA-NSKLCIPCDENLFLSVVRLAS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGAAGGGGAGGTTTATAAGAGCATGTGCAAACAAATGGAGGAAGATAGGAAGCAAAGTTGTACCTTGTACAGCCTGCGAGCACTGCTGCCAATGGATTTTGTGGTC
TCCCTTGCATGAGGATTGCTTCATTCCGCGAGACGTCCCAAAGGGTCACTTGGTTGTCTATGTGGGTGAGAATAACAGAAGGTTTGTAATCAAAATTAGCCTTCTCAATC
ACCCTTTGTTCAAGGCATTGCTGGATCAAGCACAAGATGAGTTTGATTTCACTGCAAACTCAAAACTCTGCATTCCTTGTGATGAGAACCTTTTCCTTAGTGTTGTCCGC
CTCGCTAGCTCACCTGATAACCGACAAATCCCTCTGCGTCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGATGAAGGGGAGGTTTATAAGAGCATGTGCAAACAAATGGAGGAAGATAGGAAGCAAAGTTGTACCTTGTACAGCCTGCGAGCACTGCTGCCAATGGATTTTGTGGTC
TCCCTTGCATGAGGATTGCTTCATTCCGCGAGACGTCCCAAAGGGTCACTTGGTTGTCTATGTGGGTGAGAATAACAGAAGGTTTGTAATCAAAATTAGCCTTCTCAATC
ACCCTTTGTTCAAGGCATTGCTGGATCAAGCACAAGATGAGTTTGATTTCACTGCAAACTCAAAACTCTGCATTCCTTGTGATGAGAACCTTTTCCTTAGTGTTGTCCGC
CTCGCTAGCTCACCTGATAACCGACAAATCCCTCTGCGTCTTTGA
Protein sequenceShow/hide protein sequence
MMKGRFIRACANKWRKIGSKVVPCTACEHCCQWILWSPLHEDCFIPRDVPKGHLVVYVGENNRRFVIKISLLNHPLFKALLDQAQDEFDFTANSKLCIPCDENLFLSVVR
LASSPDNRQIPLRL