; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi01G013350 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G013350
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr01:11558679..11559530
RNA-Seq ExpressionLsi01G013350
SyntenyLsi01G013350
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595252.1 hypothetical protein SDJN03_11805, partial [Cucurbita argyrosperma subsp. sororia]1.5e-0966.23Show/hide
Query:  MMDNKTKATRSSKRRRRTSSSSRTSNNSSTTATQPTSSSNFQPNYNDDGTFVQTITRFLHELRTDPTEPDSSIRFQN
        MMDNK KA R SKRRR  S+     NN STT TQPTS S  Q N NDD  FVQT+TRFLHELRTD TE DSS R  N
Subjt:  MMDNKTKATRSSKRRRRTSSSSRTSNNSSTTATQPTSSSNFQPNYNDDGTFVQTITRFLHELRTDPTEPDSSIRFQN

XP_022143962.1 uncharacterized protein LOC111013747 [Momordica charantia]2.0e-1172.22Show/hide
Query:  MMDNKTKATRSSKRRRRTSSSSRTSNNSSTTATQPTSSSNFQPNYNDDGTFVQTITRFLHELRTDPTEPDSS
        MMDNKTKATR SKRRR+  SSS  +++SST A QPT S   Q NYNDD  FVQTITRFLHELRTDP+E DSS
Subjt:  MMDNKTKATRSSKRRRRTSSSSRTSNNSSTTATQPTSSSNFQPNYNDDGTFVQTITRFLHELRTDPTEPDSS

XP_022963091.1 uncharacterized protein LOC111463394 [Cucurbita moschata]5.6e-0964.94Show/hide
Query:  MMDNKTKATRSSKRRRRTSSSSRTSNNSSTTATQPTSSSNFQPNYNDDGTFVQTITRFLHELRTDPTEPDSSIRFQN
        MMD+K KA R SKRRR  S+S    NN STT TQPTS S  Q N N+D  FVQT+TRFLHELRTD TE DSS R  N
Subjt:  MMDNKTKATRSSKRRRRTSSSSRTSNNSSTTATQPTSSSNFQPNYNDDGTFVQTITRFLHELRTDPTEPDSSIRFQN

XP_022972657.1 uncharacterized protein LOC111471189 [Cucurbita maxima]8.6e-1066.23Show/hide
Query:  MMDNKTKATRSSKRRRRTSSSSRTSNNSSTTATQPTSSSNFQPNYNDDGTFVQTITRFLHELRTDPTEPDSSIRFQN
        MMDNK KA R SKRRR  S+S    NN STT TQPTS S  Q N NDD  FVQT+TRFLHEL+TD TE DSS R  N
Subjt:  MMDNKTKATRSSKRRRRTSSSSRTSNNSSTTATQPTSSSNFQPNYNDDGTFVQTITRFLHELRTDPTEPDSSIRFQN

XP_023518736.1 uncharacterized protein LOC111782160 [Cucurbita pepo subsp. pepo]1.9e-0964.94Show/hide
Query:  MMDNKTKATRSSKRRRRTSSSSRTSNNSSTTATQPTSSSNFQPNYNDDGTFVQTITRFLHELRTDPTEPDSSIRFQN
        MMDNK KA R SKRRR  S+S    NN STT TQPTS S  Q N NDD  FVQT+TRFLHEL+TD TE D+S R  N
Subjt:  MMDNKTKATRSSKRRRRTSSSSRTSNNSSTTATQPTSSSNFQPNYNDDGTFVQTITRFLHELRTDPTEPDSSIRFQN

TrEMBL top hitse value%identityAlignment
A0A6J1CSB9 uncharacterized protein LOC1110137479.9e-1272.22Show/hide
Query:  MMDNKTKATRSSKRRRRTSSSSRTSNNSSTTATQPTSSSNFQPNYNDDGTFVQTITRFLHELRTDPTEPDSS
        MMDNKTKATR SKRRR+  SSS  +++SST A QPT S   Q NYNDD  FVQTITRFLHELRTDP+E DSS
Subjt:  MMDNKTKATRSSKRRRRTSSSSRTSNNSSTTATQPTSSSNFQPNYNDDGTFVQTITRFLHELRTDPTEPDSS

A0A6J1HF45 uncharacterized protein LOC1114633942.7e-0964.94Show/hide
Query:  MMDNKTKATRSSKRRRRTSSSSRTSNNSSTTATQPTSSSNFQPNYNDDGTFVQTITRFLHELRTDPTEPDSSIRFQN
        MMD+K KA R SKRRR  S+S    NN STT TQPTS S  Q N N+D  FVQT+TRFLHELRTD TE DSS R  N
Subjt:  MMDNKTKATRSSKRRRRTSSSSRTSNNSSTTATQPTSSSNFQPNYNDDGTFVQTITRFLHELRTDPTEPDSSIRFQN

A0A6J1I5F9 uncharacterized protein LOC1114711894.2e-1066.23Show/hide
Query:  MMDNKTKATRSSKRRRRTSSSSRTSNNSSTTATQPTSSSNFQPNYNDDGTFVQTITRFLHELRTDPTEPDSSIRFQN
        MMDNK KA R SKRRR  S+S    NN STT TQPTS S  Q N NDD  FVQT+TRFLHEL+TD TE DSS R  N
Subjt:  MMDNKTKATRSSKRRRRTSSSSRTSNNSSTTATQPTSSSNFQPNYNDDGTFVQTITRFLHELRTDPTEPDSSIRFQN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGACAACAAGACGAAGGCAACAAGATCGTCCAAACGACGACGGAGAACATCTTCGAGCTCAAGAACAAGCAATAATTCGTCAACCACAGCTACTCAGCCAACCAG
CTCAAGTAATTTTCAACCAAATTACAACGATGATGGAACATTTGTGCAGACCATCACAAGATTCCTCCATGAACTGAGAACCGACCCGACCGAACCAGATAGTTCCATTC
GTTTCCAAAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGATGGACAACAAGACGAAGGCAACAAGATCGTCCAAACGACGACGGAGAACATCTTCGAGCTCAAGAACAAGCAATAATTCGTCAACCACAGCTACTCAGCCAACCAG
CTCAAGTAATTTTCAACCAAATTACAACGATGATGGAACATTTGTGCAGACCATCACAAGATTCCTCCATGAACTGAGAACCGACCCGACCGAACCAGATAGTTCCATTC
GTTTCCAAAATTAA
Protein sequenceShow/hide protein sequence
MMDNKTKATRSSKRRRRTSSSSRTSNNSSTTATQPTSSSNFQPNYNDDGTFVQTITRFLHELRTDPTEPDSSIRFQN