; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi01G013830 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G013830
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr01:11979780..11980250
RNA-Seq ExpressionLsi01G013830
SyntenyLsi01G013830
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047323.1 hypothetical protein E6C27_scaffold908G001440 [Cucumis melo var. makuwa]1.8e-6277.85Show/hide
Query:  MSDMSYNGSNSIDLLMLNANSYDYPAAEFGFTSQHQSDGDPIEDNPEVEQTYHSYYEWLSNELNSTNL-FDCQDPYGNQNGCRMEN-TELILLQNEDQLE
        MSDM YNGS+SI LLMLNAN Y+Y  AEFGF SQHQSDGDPI DNPE EQTYHS Y W SNE+  T+L F+C+ PYGNQNGC  E+ TELIL QNE+QLE
Subjt:  MSDMSYNGSNSIDLLMLNANSYDYPAAEFGFTSQHQSDGDPIEDNPEVEQTYHSYYEWLSNELNSTNL-FDCQDPYGNQNGCRMEN-TELILLQNEDQLE

Query:  DYNGDSRNLYYEFTWDCFQFWFGLGEDEQGQDWNGQELKPENDCNSDALALLEAILGY
        DYNGDSRNLYYEF+WDC +FWFGLGE+EQGQ+ NGQEL PENDC SDALALLEAILGY
Subjt:  DYNGDSRNLYYEFTWDCFQFWFGLGEDEQGQDWNGQELKPENDCNSDALALLEAILGY

KAG6595286.1 hypothetical protein SDJN03_11839, partial [Cucurbita argyrosperma subsp. sororia]5.5e-4865.62Show/hide
Query:  MSYNGSNSIDLLMLNANSYDYPAAE-----FGFTSQHQ-SDGDPIEDNPEVEQTYHSYYEWLSNELNSTNL-FDCQDPYGNQNGCRMENTELILLQNEDQ
        M+ +GSNSI LLM NANSYDYP         GFT QHQ SDGDPIED+PE ++T  S +E   NEL+S++L F+ QDPY NQ+GC MEN ELIL  NEDQ
Subjt:  MSYNGSNSIDLLMLNANSYDYPAAE-----FGFTSQHQ-SDGDPIEDNPEVEQTYHSYYEWLSNELNSTNL-FDCQDPYGNQNGCRMENTELILLQNEDQ

Query:  LEDYNGDSRNLYYEFTWDCFQFWFGLGEDEQGQDWNGQELKPENDCNSDALALLEAILGY
         EDY GD RNLYYEF W CF++WFGLGEDE  QDWNGQEL+ E DC+S+A+ALLE+ILGY
Subjt:  LEDYNGDSRNLYYEFTWDCFQFWFGLGEDEQGQDWNGQELKPENDCNSDALALLEAILGY

KGN54204.1 hypothetical protein Csa_017990 [Cucumis sativus]2.2e-6077.22Show/hide
Query:  MSDMSYNGSNSIDLLMLNANSYDYPAAEFGFTSQHQSDGDPIEDNPEVEQTYHSYYEWLSNELNSTNL-FDCQDPYGNQNGCRMEN-TELILLQNEDQLE
        MSDM YNGS+SI LLMLNAN YD P  EFGF SQHQSDGDPI DNPE EQ YHS Y W SNE+N T+L F+C+  YGNQNGC  E+ TELIL QNE+QLE
Subjt:  MSDMSYNGSNSIDLLMLNANSYDYPAAEFGFTSQHQSDGDPIEDNPEVEQTYHSYYEWLSNELNSTNL-FDCQDPYGNQNGCRMEN-TELILLQNEDQLE

Query:  DYNGDSRNLYYEFTWDCFQFWFGLGEDEQGQDWNGQELKPENDCNSDALALLEAILGY
        DYNGDSRNLYYEF+WDC +FWFG+GEDEQGQ+ NGQEL PENDC SDALALLEAILGY
Subjt:  DYNGDSRNLYYEFTWDCFQFWFGLGEDEQGQDWNGQELKPENDCNSDALALLEAILGY

TrEMBL top hitse value%identityAlignment
A0A0A0KZF2 Uncharacterized protein1.1e-6077.22Show/hide
Query:  MSDMSYNGSNSIDLLMLNANSYDYPAAEFGFTSQHQSDGDPIEDNPEVEQTYHSYYEWLSNELNSTNL-FDCQDPYGNQNGCRMEN-TELILLQNEDQLE
        MSDM YNGS+SI LLMLNAN YD P  EFGF SQHQSDGDPI DNPE EQ YHS Y W SNE+N T+L F+C+  YGNQNGC  E+ TELIL QNE+QLE
Subjt:  MSDMSYNGSNSIDLLMLNANSYDYPAAEFGFTSQHQSDGDPIEDNPEVEQTYHSYYEWLSNELNSTNL-FDCQDPYGNQNGCRMEN-TELILLQNEDQLE

Query:  DYNGDSRNLYYEFTWDCFQFWFGLGEDEQGQDWNGQELKPENDCNSDALALLEAILGY
        DYNGDSRNLYYEF+WDC +FWFG+GEDEQGQ+ NGQEL PENDC SDALALLEAILGY
Subjt:  DYNGDSRNLYYEFTWDCFQFWFGLGEDEQGQDWNGQELKPENDCNSDALALLEAILGY

A0A5A7TUT5 Uncharacterized protein8.6e-6377.85Show/hide
Query:  MSDMSYNGSNSIDLLMLNANSYDYPAAEFGFTSQHQSDGDPIEDNPEVEQTYHSYYEWLSNELNSTNL-FDCQDPYGNQNGCRMEN-TELILLQNEDQLE
        MSDM YNGS+SI LLMLNAN Y+Y  AEFGF SQHQSDGDPI DNPE EQTYHS Y W SNE+  T+L F+C+ PYGNQNGC  E+ TELIL QNE+QLE
Subjt:  MSDMSYNGSNSIDLLMLNANSYDYPAAEFGFTSQHQSDGDPIEDNPEVEQTYHSYYEWLSNELNSTNL-FDCQDPYGNQNGCRMEN-TELILLQNEDQLE

Query:  DYNGDSRNLYYEFTWDCFQFWFGLGEDEQGQDWNGQELKPENDCNSDALALLEAILGY
        DYNGDSRNLYYEF+WDC +FWFGLGE+EQGQ+ NGQEL PENDC SDALALLEAILGY
Subjt:  DYNGDSRNLYYEFTWDCFQFWFGLGEDEQGQDWNGQELKPENDCNSDALALLEAILGY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGATATGAGTTACAATGGCTCCAACTCCATTGACCTGCTCATGCTAAATGCAAACAGCTACGACTACCCTGCGGCGGAGTTCGGTTTCACGAGCCAACACCAGTC
TGATGGAGACCCAATTGAAGACAATCCTGAGGTTGAACAGACTTACCACAGTTATTACGAGTGGTTGTCGAATGAACTCAACTCCACCAATCTCTTCGATTGCCAAGACC
CTTATGGCAATCAAAATGGCTGCAGAATGGAGAATACAGAACTCATTCTCCTCCAGAATGAGGATCAACTTGAGGATTATAATGGTGATTCTAGAAACTTGTACTATGAA
TTTACTTGGGATTGCTTTCAGTTTTGGTTTGGACTTGGGGAAGATGAGCAAGGTCAAGACTGGAATGGGCAAGAATTGAAACCTGAAAATGACTGCAATTCTGATGCTTT
GGCACTCCTAGAAGCCATCCTGGGGTACTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGGATATGAGTTACAATGGCTCCAACTCCATTGACCTGCTCATGCTAAATGCAAACAGCTACGACTACCCTGCGGCGGAGTTCGGTTTCACGAGCCAACACCAGTC
TGATGGAGACCCAATTGAAGACAATCCTGAGGTTGAACAGACTTACCACAGTTATTACGAGTGGTTGTCGAATGAACTCAACTCCACCAATCTCTTCGATTGCCAAGACC
CTTATGGCAATCAAAATGGCTGCAGAATGGAGAATACAGAACTCATTCTCCTCCAGAATGAGGATCAACTTGAGGATTATAATGGTGATTCTAGAAACTTGTACTATGAA
TTTACTTGGGATTGCTTTCAGTTTTGGTTTGGACTTGGGGAAGATGAGCAAGGTCAAGACTGGAATGGGCAAGAATTGAAACCTGAAAATGACTGCAATTCTGATGCTTT
GGCACTCCTAGAAGCCATCCTGGGGTACTGA
Protein sequenceShow/hide protein sequence
MSDMSYNGSNSIDLLMLNANSYDYPAAEFGFTSQHQSDGDPIEDNPEVEQTYHSYYEWLSNELNSTNLFDCQDPYGNQNGCRMENTELILLQNEDQLEDYNGDSRNLYYE
FTWDCFQFWFGLGEDEQGQDWNGQELKPENDCNSDALALLEAILGY