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Lsi01G013950 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G013950
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionPlant protein 1589 of unknown function
Genome locationchr01:12100285..12101313
RNA-Seq ExpressionLsi01G013950
SyntenyLsi01G013950
Gene Ontology termsNA
InterPro domainsIPR006476 - Conserved hypothetical protein CHP01589, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603679.1 hypothetical protein SDJN03_04288, partial [Cucurbita argyrosperma subsp. sororia]4.9e-3577.88Show/hide
Query:  MDDDPSASYIHMVHHLIEKCIIFNMTKEECMEALSRHANIKPVITSTGPFLSLLSLWNELEKENKEFFEAYNKKRRDVTTAKVSEGNSSDTSDFNLLGSR
        M+DDPSASYIHMVHHLIE+CIIFNM KEECMEALS+HANIKPVITST        +WNELEKENKEFFEAY KKRRDVTT + ++GNS+DTSDFNLL S 
Subjt:  MDDDPSASYIHMVHHLIEKCIIFNMTKEECMEALSRHANIKPVITSTGPFLSLLSLWNELEKENKEFFEAYNKKRRDVTTAKVSEGNSSDTSDFNLLGSR

Query:  DTTS
        +TTS
Subjt:  DTTS

XP_004142092.1 uncharacterized protein LOC101219487 [Cucumis sativus]2.3e-3780.37Show/hide
Query:  MDDDPSASYIHMVHHLIEKCIIFNMTKEECMEALSRHANIKPVITSTGPFLSLLSLWNELEKENKEFFEAYNKKRRDVTTAKVSEGNSSDTSDFNLLGSR
        MDDDPSASYIHMVHHLIEKCIIFNMTKEEC+EALS+HANI+PVITST        +WNELEKENKEFFEAY KKRRDVTT K   G+SS+T+DFNLLGSR
Subjt:  MDDDPSASYIHMVHHLIEKCIIFNMTKEECMEALSRHANIKPVITSTGPFLSLLSLWNELEKENKEFFEAYNKKRRDVTTAKVSEGNSSDTSDFNLLGSR

Query:  DTTSSFS
        DTTSS S
Subjt:  DTTSSFS

XP_022977252.1 uncharacterized protein LOC111477620 [Cucurbita maxima]3.7e-3577.88Show/hide
Query:  MDDDPSASYIHMVHHLIEKCIIFNMTKEECMEALSRHANIKPVITSTGPFLSLLSLWNELEKENKEFFEAYNKKRRDVTTAKVSEGNSSDTSDFNLLGSR
        M+DDPSASYIHMVHHLIE+CI+FNM KEECMEALS+HANIKPVITST        +WNELEKENKEFFEAY KKRRDVTT + ++G SSDTSDFNLL S 
Subjt:  MDDDPSASYIHMVHHLIEKCIIFNMTKEECMEALSRHANIKPVITSTGPFLSLLSLWNELEKENKEFFEAYNKKRRDVTTAKVSEGNSSDTSDFNLLGSR

Query:  DTTS
        DTTS
Subjt:  DTTS

XP_023544368.1 uncharacterized protein LOC111803972 [Cucurbita pepo subsp. pepo]2.2e-3578.85Show/hide
Query:  MDDDPSASYIHMVHHLIEKCIIFNMTKEECMEALSRHANIKPVITSTGPFLSLLSLWNELEKENKEFFEAYNKKRRDVTTAKVSEGNSSDTSDFNLLGSR
        M+DDPSASYIHMVHHLIE+CIIFNM KEECMEALS+HANIKPVITST        +WNELEKENKEFFEAY KKRRDVTT + ++GNSSDTSDFNLL S 
Subjt:  MDDDPSASYIHMVHHLIEKCIIFNMTKEECMEALSRHANIKPVITSTGPFLSLLSLWNELEKENKEFFEAYNKKRRDVTTAKVSEGNSSDTSDFNLLGSR

Query:  DTTS
        +TTS
Subjt:  DTTS

XP_038883060.1 uncharacterized protein LOC120074114 [Benincasa hispida]5.9e-4186.11Show/hide
Query:  MDDDPSASYIHMVHHLIEKCIIFNMTKEECMEALSRHANIKPVITSTGPFLSLLSLWNELEKENKEFFEAYNKKRRDVTTAKVSEGNSSDTSDFNLLGSR
        MDDDPSASYIHMVHHLIEKCIIFNMTKEECMEALS+HANIKPVITST        +WNELEKENKEFFEAY KKRRDV T KVSEGNSSDTSDFNLLGSR
Subjt:  MDDDPSASYIHMVHHLIEKCIIFNMTKEECMEALSRHANIKPVITSTGPFLSLLSLWNELEKENKEFFEAYNKKRRDVTTAKVSEGNSSDTSDFNLLGSR

Query:  DTTSSFSQ
        DTTSS S+
Subjt:  DTTSSFSQ

TrEMBL top hitse value%identityAlignment
A0A0A0KZG8 Uncharacterized protein1.1e-3780.37Show/hide
Query:  MDDDPSASYIHMVHHLIEKCIIFNMTKEECMEALSRHANIKPVITSTGPFLSLLSLWNELEKENKEFFEAYNKKRRDVTTAKVSEGNSSDTSDFNLLGSR
        MDDDPSASYIHMVHHLIEKCIIFNMTKEEC+EALS+HANI+PVITST        +WNELEKENKEFFEAY KKRRDVTT K   G+SS+T+DFNLLGSR
Subjt:  MDDDPSASYIHMVHHLIEKCIIFNMTKEECMEALSRHANIKPVITSTGPFLSLLSLWNELEKENKEFFEAYNKKRRDVTTAKVSEGNSSDTSDFNLLGSR

Query:  DTTSSFS
        DTTSS S
Subjt:  DTTSSFS

A0A1S3BI57 uncharacterized protein LOC1034899163.5e-3180.85Show/hide
Query:  MVHHLIEKCIIFNMTKEECMEALSRHANIKPVITSTGPFLSLLSLWNELEKENKEFFEAYNKKRRDVTTAKVSEGNSSDTSDFNLLGSRDTTSS
        MVHHLIEKCIIFNMTKEEC+EALS+HANI+PVITST        +WNELEKENKEFFEAY KKRRDVTT    EGNSSDT+DFNLLGSRDTTSS
Subjt:  MVHHLIEKCIIFNMTKEECMEALSRHANIKPVITSTGPFLSLLSLWNELEKENKEFFEAYNKKRRDVTTAKVSEGNSSDTSDFNLLGSRDTTSS

A0A6J1HDK1 uncharacterized protein LOC1114631858.4e-3373.79Show/hide
Query:  MDDDPSASYIHMVHHLIEKCIIFNMTKEECMEALSRHANIKPVITSTGPFLSLLSLWNELEKENKEFFEAYNKKRRDVTTAKVSEGNSSDTSDFNLLGSR
        M+DDPSASYIHMVHHLIE  I+FNM+KEECMEALS+HANI+PV+TST        +WNELEKENKEFFEAY KKRRDVTT K+   +SSDTS FNLLG  
Subjt:  MDDDPSASYIHMVHHLIEKCIIFNMTKEECMEALSRHANIKPVITSTGPFLSLLSLWNELEKENKEFFEAYNKKRRDVTTAKVSEGNSSDTSDFNLLGSR

Query:  DTT
        DTT
Subjt:  DTT

A0A6J1IAZ7 uncharacterized protein LOC1114712581.7e-3374.04Show/hide
Query:  MDDDPSASYIHMVHHLIEKCIIFNMTKEECMEALSRHANIKPVITSTGPFLSLLSLWNELEKENKEFFEAYNKKRRDVTTAKVSEGNSSDTSDFNLLGSR
        M+DDPSASYIHMVHHLIE CI+FNM+KEECMEALS+HANI+PVITST        +WNELEKENKEFF+AY KKRRDVTT K+   +SSDT  FNLLG  
Subjt:  MDDDPSASYIHMVHHLIEKCIIFNMTKEECMEALSRHANIKPVITSTGPFLSLLSLWNELEKENKEFFEAYNKKRRDVTTAKVSEGNSSDTSDFNLLGSR

Query:  DTTS
        DTTS
Subjt:  DTTS

A0A6J1IHY2 uncharacterized protein LOC1114776201.8e-3577.88Show/hide
Query:  MDDDPSASYIHMVHHLIEKCIIFNMTKEECMEALSRHANIKPVITSTGPFLSLLSLWNELEKENKEFFEAYNKKRRDVTTAKVSEGNSSDTSDFNLLGSR
        M+DDPSASYIHMVHHLIE+CI+FNM KEECMEALS+HANIKPVITST        +WNELEKENKEFFEAY KKRRDVTT + ++G SSDTSDFNLL S 
Subjt:  MDDDPSASYIHMVHHLIEKCIIFNMTKEECMEALSRHANIKPVITSTGPFLSLLSLWNELEKENKEFFEAYNKKRRDVTTAKVSEGNSSDTSDFNLLGSR

Query:  DTTS
        DTTS
Subjt:  DTTS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G10657.2 Plant protein 1589 of unknown function3.3e-1348.44Show/hide
Query:  SYIHMVHHLIEKCIIFNMTKEECMEALSRHANIKPVITSTGPFLSLLSLWNELEKENKEFFEAY
        SYI MV H+IE+CI+  MT++EC++AL  HA+I P++T        L++W  L++ENK+FFE Y
Subjt:  SYIHMVHHLIEKCIIFNMTKEECMEALSRHANIKPVITSTGPFLSLLSLWNELEKENKEFFEAY

AT3G28990.1 Plant protein 1589 of unknown function9.8e-1860.29Show/hide
Query:  ASYIHMVHHLIEKCIIFNMTKEECMEALSRHANIKPVITSTGPFLSLLSLWNELEKENKEFFEAYNKK
        A YIH+V H+IE C+ FNM+KEECMEALS +ANI P+ITST        +W EL KENK+FFE Y +K
Subjt:  ASYIHMVHHLIEKCIIFNMTKEECMEALSRHANIKPVITSTGPFLSLLSLWNELEKENKEFFEAYNKK

AT3G55240.1 Plant protein 1589 of unknown function1.7e-2265.33Show/hide
Query:  MDDDPSASYIHMVHHLIEKCIIFNMTKEECMEALSRHANIKPVITSTGPFLSLLSLWNELEKENKEFFEAYNKKR
        M D  SASYIHMV H+IEKC+IF+M+KEEC+EALS+HANI PVITST        +W ELEKENKEFF+AY +++
Subjt:  MDDDPSASYIHMVHHLIEKCIIFNMTKEECMEALSRHANIKPVITSTGPFLSLLSLWNELEKENKEFFEAYNKKR

AT5G02580.1 Plant protein 1589 of unknown function2.0e-2364.47Show/hide
Query:  ASYIHMVHHLIEKCIIFNMTKEECMEALSRHANIKPVITSTGPFLSLLSLWNELEKENKEFFEAYNKKRRDVTTAK
        ASYIH+VHHLIE+CI+FNM KEECM+AL +HANIKP+ITST        +W EL KENKEFFEAY ++R ++ T K
Subjt:  ASYIHMVHHLIEKCIIFNMTKEECMEALSRHANIKPVITSTGPFLSLLSLWNELEKENKEFFEAYNKKRRDVTTAK

AT5G02580.2 Plant protein 1589 of unknown function1.2e-1580.95Show/hide
Query:  ASYIHMVHHLIEKCIIFNMTKEECMEALSRHANIKPVITSTG
        ASYIH+VHHLIE+CI+FNM KEECM+AL +HANIKP+ITSTG
Subjt:  ASYIHMVHHLIEKCIIFNMTKEECMEALSRHANIKPVITSTG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGACGACCCCTCTGCTTCATACATCCACATGGTGCACCACTTGATCGAAAAGTGTATAATTTTCAACATGACCAAAGAAGAGTGCATGGAAGCTCTCTCCAGACA
TGCAAATATCAAACCGGTCATCACTTCCACCGGTCCGTTTCTCTCTCTCCTCTCACTATGGAATGAATTGGAGAAGGAGAACAAGGAGTTCTTTGAAGCGTATAATAAGA
AACGACGTGACGTTACTACCGCGAAGGTATCCGAGGGGAATTCGTCCGACACGTCGGATTTCAACTTGCTGGGTTCGAGGGATACGACGTCGTCTTTTAGTCAGTAG
mRNA sequenceShow/hide mRNA sequence
ATTTTCTCTCACTTTTTCCCTTCACTTTCTCTCATTTTCTCTTCATCCAAACAGAAAATCGCACCCCCATGGACGACGACCCCTCTGCTTCATACATCCACATGGTGCAC
CACTTGATCGAAAAGTGTATAATTTTCAACATGACCAAAGAAGAGTGCATGGAAGCTCTCTCCAGACATGCAAATATCAAACCGGTCATCACTTCCACCGGTCCGTTTCT
CTCTCTCCTCTCACTATGGAATGAATTGGAGAAGGAGAACAAGGAGTTCTTTGAAGCGTATAATAAGAAACGACGTGACGTTACTACCGCGAAGGTATCCGAGGGGAATT
CGTCCGACACGTCGGATTTCAACTTGCTGGGTTCGAGGGATACGACGTCGTCTTTTAGTCAGTAGGTGAATAGACAGGCGGCGTAGGGTGGGTGGAAATTAATAAAATAG
AATAAAAATAATAAGAGGAACTGACGGCGGCGATACGATGTACGACGTCGTTTTTAGGGATTGTATTGTAGAGTAGGGGGATGGAACAGCGGCAGCGGCGGCGTAGAGAG
GGGCCGAGATGGGCTAATTGAGGGGCGTGAAGATATTTTGGGATACTATGGCTGACACGTGGGGACACGTGGCTACACGTGGCATCGTGCTGCAACTTTTTTTAAAAACT
GTATTGCTGTCGCTTGCTGATTGGGTCTTGTCGGGAGGTGTAGTGATTTAGTGGAATTTTCCTCTATTTTGTTTTTTTGTTTGTTTTCCTTCCAACAAAATTAGCCGTCC
AAGCCAACTGGTAATTTCCACCTGTTTTTTTTCCTTATTTTAAAAAATGTAAAATGATATGTAACAGTAATGAATTTAGTCTCTTTTTTTTTTA
Protein sequenceShow/hide protein sequence
MDDDPSASYIHMVHHLIEKCIIFNMTKEECMEALSRHANIKPVITSTGPFLSLLSLWNELEKENKEFFEAYNKKRRDVTTAKVSEGNSSDTSDFNLLGSRDTTSSFSQ