; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi01G014040 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G014040
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionHistone H2A
Genome locationchr01:12195265..12197905
RNA-Seq ExpressionLsi01G014040
SyntenyLsi01G014040
Gene Ontology termsGO:0031507 - heterochromatin assembly (biological process)
GO:0000775 - chromosome, centromeric region (cellular component)
GO:0000786 - nucleosome (cellular component)
GO:0000792 - heterochromatin (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003682 - chromatin binding (molecular function)
GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domainsIPR002119 - Histone H2A
IPR007125 - Histone H2A/H2B/H3
IPR009072 - Histone-fold
IPR032454 - Histone H2A, C-terminal domain
IPR032458 - Histone H2A conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE9455642.1 hypothetical protein C3L33_12460, partial [Rhododendron williamsianum]3.7e-6590.13Show/hide
Query:  MDFGGKAKRGVAGRRGGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYSRRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRND
        M+ GGKAK+G AGRR GGGPKKKPVSRSVKAGLQFPVGRIGRYLK GRY++RVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRI+PRH+LLA+RND
Subjt:  MDFGGKAKRGVAGRRGGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYSRRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRND

Query:  EELGKLLAGVTIAHGGVLPNINPVLLPKKSERAAAAKEPKSPSKGTKSPKKA
        EELGKLLAGVTIAHGGVLPNINPVLLPKK+E+ AAAKEPKSPSK TKSPKKA
Subjt:  EELGKLLAGVTIAHGGVLPNINPVLLPKKSERAAAAKEPKSPSKGTKSPKKA

XP_004142082.1 probable histone H2A.4 [Cucumis sativus]8.6e-7095.39Show/hide
Query:  MDFGGKAKRGVAGRRGGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYSRRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRND
        MD GGKAK+G AGRRGG   KKKPVSRSVKAGLQFPVGRIGRYLKNGRYS+RVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRND
Subjt:  MDFGGKAKRGVAGRRGGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYSRRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRND

Query:  EELGKLLAGVTIAHGGVLPNINPVLLPKKSERAAAAKEPKSPSKGTKSPKKA
        EELGKLLAGVTIAHGGVLPNINPVLLPKKSERAAAAKEPKSPSKGTKSPKKA
Subjt:  EELGKLLAGVTIAHGGVLPNINPVLLPKKSERAAAAKEPKSPSKGTKSPKKA

XP_008447608.1 PREDICTED: probable histone H2A.4 [Cucumis melo]1.1e-6995.42Show/hide
Query:  MDFGGKAKRGVAGRRGGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYSRRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRND
        MD GGKAK+G AGRRGG GPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYS+RVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRND
Subjt:  MDFGGKAKRGVAGRRGGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYSRRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRND

Query:  EELGKLLAGVTIAHGGVLPNINPVLLPKKSERA-AAAKEPKSPSKGTKSPKKA
        EELGKLLAGVTIAHGGVLPNINPVLLPKKSERA  AAKEPKSPSKGTKSPKKA
Subjt:  EELGKLLAGVTIAHGGVLPNINPVLLPKKSERA-AAAKEPKSPSKGTKSPKKA

XP_022143711.1 histone H2A [Momordica charantia]6.6e-7096.05Show/hide
Query:  MDFGGKAKRGVAGRRGGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYSRRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRND
        MD GGKAK+G AGRR GGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYS+RVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRND
Subjt:  MDFGGKAKRGVAGRRGGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYSRRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRND

Query:  EELGKLLAGVTIAHGGVLPNINPVLLPKKSERAAAAKEPKSPSKGTKSPKKA
        EELGKLLAGVTIAHGGVLPNINPVLLPKKSERAAA KEPKSPSKGTKSPKKA
Subjt:  EELGKLLAGVTIAHGGVLPNINPVLLPKKSERAAAAKEPKSPSKGTKSPKKA

XP_038881325.1 probable histone H2A.4 [Benincasa hispida]3.4e-6692.81Show/hide
Query:  MDFGGKAKRGVAGRRGGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYSRRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRND
        MD G KAK+GVAGR+GGGGPKKKPVSRSVKAGLQFPVGRI RYLK GRYSRRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRND
Subjt:  MDFGGKAKRGVAGRRGGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYSRRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRND

Query:  EELGKLLAGVTIAHGGVLPNINPVLLPKKSERA-AAAKEPKSPSKGTKSPKKA
        EELGKLLAGVTIAHGGVLPNINPVLL KKSERA AAAKEPKS SK T+SPKKA
Subjt:  EELGKLLAGVTIAHGGVLPNINPVLLPKKSERA-AAAKEPKSPSKGTKSPKKA

TrEMBL top hitse value%identityAlignment
A0A0A0KXF2 Histone H2A4.1e-7095.39Show/hide
Query:  MDFGGKAKRGVAGRRGGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYSRRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRND
        MD GGKAK+G AGRRGG   KKKPVSRSVKAGLQFPVGRIGRYLKNGRYS+RVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRND
Subjt:  MDFGGKAKRGVAGRRGGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYSRRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRND

Query:  EELGKLLAGVTIAHGGVLPNINPVLLPKKSERAAAAKEPKSPSKGTKSPKKA
        EELGKLLAGVTIAHGGVLPNINPVLLPKKSERAAAAKEPKSPSKGTKSPKKA
Subjt:  EELGKLLAGVTIAHGGVLPNINPVLLPKKSERAAAAKEPKSPSKGTKSPKKA

A0A1S3BHV2 Histone H2A5.4e-7095.42Show/hide
Query:  MDFGGKAKRGVAGRRGGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYSRRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRND
        MD GGKAK+G AGRRGG GPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYS+RVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRND
Subjt:  MDFGGKAKRGVAGRRGGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYSRRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRND

Query:  EELGKLLAGVTIAHGGVLPNINPVLLPKKSERA-AAAKEPKSPSKGTKSPKKA
        EELGKLLAGVTIAHGGVLPNINPVLLPKKSERA  AAKEPKSPSKGTKSPKKA
Subjt:  EELGKLLAGVTIAHGGVLPNINPVLLPKKSERA-AAAKEPKSPSKGTKSPKKA

A0A2N9IZ61 Histone H2A1.1e-6591.45Show/hide
Query:  MDFGGKAKRGVAGRRGGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYSRRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRND
        MD GGK KRG AGR+ GGGPKKKPVSRSVKAGLQFPVGRIGRYLK GRYS+RVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRND
Subjt:  MDFGGKAKRGVAGRRGGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYSRRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRND

Query:  EELGKLLAGVTIAHGGVLPNINPVLLPKKSERAAAAKEPKSPSKGTKSPKKA
        EELGKLLAGVTIAHGGVLPNINPVLLPKK+E+ AAAKEPKSP++ TKSPKKA
Subjt:  EELGKLLAGVTIAHGGVLPNINPVLLPKKSERAAAAKEPKSPSKGTKSPKKA

A0A5A7U1I6 Histone H2A5.4e-7095.42Show/hide
Query:  MDFGGKAKRGVAGRRGGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYSRRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRND
        MD GGKAK+G AGRRGG GPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYS+RVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRND
Subjt:  MDFGGKAKRGVAGRRGGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYSRRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRND

Query:  EELGKLLAGVTIAHGGVLPNINPVLLPKKSERA-AAAKEPKSPSKGTKSPKKA
        EELGKLLAGVTIAHGGVLPNINPVLLPKKSERA  AAKEPKSPSKGTKSPKKA
Subjt:  EELGKLLAGVTIAHGGVLPNINPVLLPKKSERA-AAAKEPKSPSKGTKSPKKA

A0A6J1CR43 Histone H2A3.2e-7096.05Show/hide
Query:  MDFGGKAKRGVAGRRGGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYSRRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRND
        MD GGKAK+G AGRR GGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYS+RVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRND
Subjt:  MDFGGKAKRGVAGRRGGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYSRRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRND

Query:  EELGKLLAGVTIAHGGVLPNINPVLLPKKSERAAAAKEPKSPSKGTKSPKKA
        EELGKLLAGVTIAHGGVLPNINPVLLPKKSERAAA KEPKSPSKGTKSPKKA
Subjt:  EELGKLLAGVTIAHGGVLPNINPVLLPKKSERAAAAKEPKSPSKGTKSPKKA

SwissProt top hitse value%identityAlignment
A2Y5G8 Probable histone H2A.44.7e-6383.75Show/hide
Query:  MDFGGKA--KRGVAGRRGGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYSRRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVR
        M+ G K   K G  GRRGGGGPKKKPVSRSVKAGLQFPVGRIGRYLK GRYS+R+GTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLA+R
Subjt:  MDFGGKA--KRGVAGRRGGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYSRRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVR

Query:  NDEELGKLLAGVTIAHGGVLPNINPVLLPKKSERAAA-----AKEPKSPSKG-TKSPKKA
        NDEELGKLLAGVTIAHGGVLPNINPVLLPKK+  AAA      K PKSP K  TKSPKKA
Subjt:  NDEELGKLLAGVTIAHGGVLPNINPVLLPKKSERAAA-----AKEPKSPSKG-TKSPKKA

P19177 Histone H2A7.5e-6183.55Show/hide
Query:  MDFGGKAKRGVAGRRGGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYSRRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRND
        M+  GKAK+G  GR+  GGP+KK V+RSVKAGLQFPVGRIGRYLK GRY++RVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKK RIIPRH+LLAVRND
Subjt:  MDFGGKAKRGVAGRRGGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYSRRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRND

Query:  EELGKLLAGVTIAHGGVLPNINPVLLPKKSERAAAAKEPKSPSKGTKSPKKA
        EELGKLLAGVT AHGGVLPNINPVLLPKK+    AAKEPKSPSK  KSPKKA
Subjt:  EELGKLLAGVTIAHGGVLPNINPVLLPKKSERAAAAKEPKSPSKGTKSPKKA

Q6L500 Probable histone H2A.44.7e-6383.75Show/hide
Query:  MDFGGKA--KRGVAGRRGGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYSRRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVR
        M+ G K   K G  GRRGGGGPKKKPVSRSVKAGLQFPVGRIGRYLK GRYS+R+GTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLA+R
Subjt:  MDFGGKA--KRGVAGRRGGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYSRRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVR

Query:  NDEELGKLLAGVTIAHGGVLPNINPVLLPKKSERAAA-----AKEPKSPSKG-TKSPKKA
        NDEELGKLLAGVTIAHGGVLPNINPVLLPKK+  AAA      K PKSP K  TKSPKKA
Subjt:  NDEELGKLLAGVTIAHGGVLPNINPVLLPKKSERAAA-----AKEPKSPSKG-TKSPKKA

Q9LZ46 Probable histone H2A.41.6e-6687.58Show/hide
Query:  MDFGGKAKRGVAGRRGGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYSRRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRND
        MD G K K+G AGRR GGGPKKKPVSRSVK+GLQFPVGRIGRYLK GRYS+RVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRND
Subjt:  MDFGGKAKRGVAGRRGGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYSRRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRND

Query:  EELGKLLAGVTIAHGGVLPNINPVLLPKKSERAAA-AKEPKSPSKGTKSPKKA
        EELG LL GVTIAHGGVLPNINP+LLPKKSE+AA+  K PKSPSK TKSPKK+
Subjt:  EELGKLLAGVTIAHGGVLPNINPVLLPKKSERAAA-AKEPKSPSKGTKSPKKA

Q9M531 Histone H2A1.0e-6588.31Show/hide
Query:  MDFGGKAKRGVAGRRGGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYSRRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRND
        MD G K K+G AG R GGGPKKKPVSRSVKAGLQFPVGRIGR+LK GRY++RVG+GAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRND
Subjt:  MDFGGKAKRGVAGRRGGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYSRRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRND

Query:  EELGKLLAGVTIAHGGVLPNINPVLLPKKSERAAAA--KEPKSPSKGTKSPKKA
        EELGKLLAGVTIAHGGVLPNINPVLLPKK+E+AAAA  KEPKSP+K TKSPKKA
Subjt:  EELGKLLAGVTIAHGGVLPNINPVLLPKKSERAAAA--KEPKSPSKGTKSPKKA

Arabidopsis top hitse value%identityAlignment
AT3G20670.1 histone H2A 136.6e-4472.09Show/hide
Query:  GRRGGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYSRRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTI
        G+  G G  KK  SRS KAGLQFPVGRI R+LKNG+Y+ RVG GAPVYLAAVLEYLAAEVLELAGNAARDNKK RI+PRH+ LAVRNDEEL KLL  VTI
Subjt:  GRRGGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYSRRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTI

Query:  AHGGVLPNINPVLLPKKSERAAAAKEPKS
        A+GGV+PNI+ +LLPKK    A A +P +
Subjt:  AHGGVLPNINPVLLPKKSERAAAAKEPKS

AT5G02560.1 histone H2A 121.1e-6787.58Show/hide
Query:  MDFGGKAKRGVAGRRGGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYSRRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRND
        MD G K K+G AGRR GGGPKKKPVSRSVK+GLQFPVGRIGRYLK GRYS+RVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRND
Subjt:  MDFGGKAKRGVAGRRGGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYSRRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRND

Query:  EELGKLLAGVTIAHGGVLPNINPVLLPKKSERAAA-AKEPKSPSKGTKSPKKA
        EELG LL GVTIAHGGVLPNINP+LLPKKSE+AA+  K PKSPSK TKSPKK+
Subjt:  EELGKLLAGVTIAHGGVLPNINPVLLPKKSERAAA-AKEPKSPSKGTKSPKKA

AT5G02560.2 histone H2A 121.3e-6375.71Show/hide
Query:  MDFGGKAKRGVAGRRGGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYSRRVGTGAPVYLAAVLEYLAAE------------------------VLELA
        MD G K K+G AGRR GGGPKKKPVSRSVK+GLQFPVGRIGRYLK GRYS+RVGTGAPVYLAAVLEYLAAE                        VLELA
Subjt:  MDFGGKAKRGVAGRRGGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYSRRVGTGAPVYLAAVLEYLAAE------------------------VLELA

Query:  GNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKSERAAA-AKEPKSPSKGTKSPKKA
        GNAARDNKKNRIIPRHVLLAVRNDEELG LL GVTIAHGGVLPNINP+LLPKKSE+AA+  K PKSPSK TKSPKK+
Subjt:  GNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKSERAAA-AKEPKSPSKGTKSPKKA

AT5G27670.1 histone H2A 75.6e-5174.83Show/hide
Query:  KAKRGVAGRRGGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYSRRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGK
        K  RG  GR+  GG +KK VS+SVKAGLQFPVGRI RYLK GRY+ R G+GAPVYLAAVLEYLAAEVLELAGNAARDNKKNRI PRH+ LA+RNDEELG+
Subjt:  KAKRGVAGRRGGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYSRRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGK

Query:  LLAGVTIAHGGVLPNINPVLLPKKSERAAAAKEPKSPSKGTKSPKKA
        LL GVTIA GGVLPNINPVLLPKKS  +++  E  S    TKSPKKA
Subjt:  LLAGVTIAHGGVLPNINPVLLPKKSERAAAAKEPKSPSKGTKSPKKA

AT5G59870.1 histone H2A 63.9e-5272.37Show/hide
Query:  MDFGGKAKRGVAGRRGGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYSRRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRND
        M+  GK K+   GR+  G PK K VS+S+KAGLQFPVGRI R+LK GRY++R+G GAPVY+AAVLEYLAAEVLELAGNAARDNKK+RIIPRH+LLA+RND
Subjt:  MDFGGKAKRGVAGRRGGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYSRRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRND

Query:  EELGKLLAGVTIAHGGVLPNINPVLLPKKSERAAAAKEPKSPSKGTKSPKKA
        EELGKLL+GVTIAHGGVLPNIN VLLPKKS  A    E K+     KSPKKA
Subjt:  EELGKLLAGVTIAHGGVLPNINPVLLPKKSERAAAAKEPKSPSKGTKSPKKA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACTTTGGCGGCAAGGCGAAGAGAGGCGTCGCCGGCAGAAGGGGCGGCGGCGGTCCCAAGAAGAAGCCTGTCTCTCGCTCCGTCAAAGCCGGCCTCCAGTTTCCCGT
CGGCAGAATCGGCCGCTACTTGAAGAATGGCCGCTACTCACGACGGGTCGGAACTGGCGCTCCGGTTTACCTTGCTGCTGTGCTTGAGTACCTCGCTGCAGAGGTTTTGG
AACTGGCTGGGAATGCAGCAAGAGACAACAAGAAGAACAGGATCATCCCGAGACATGTCCTTTTGGCTGTGAGGAACGACGAGGAACTCGGGAAGCTTCTTGCTGGGGTG
ACGATCGCTCATGGTGGGGTGCTTCCGAATATCAACCCTGTCCTTCTTCCAAAGAAATCTGAGAGAGCAGCAGCAGCAAAGGAGCCCAAGTCTCCCTCCAAGGGCACCAA
GTCCCCAAAGAAGGCCTAG
mRNA sequenceShow/hide mRNA sequence
AAACAAATAACAAACTCGAAATTTGTTTATAATTTAGCCATATAATATAATTAAAATGAATAAAAATACAGCGATGTGTCCATGTCATCACGAATACGGCGTGTGTCATT
CACTTTCCATTTTATTTCTCATTTCATCCAAATGTCATCTCCGTTGAAAACCCGTCGTTAACATCCCTCAAATTTTCACTTCTTTTTTTTCTGTTTGTTTCTCGAGAAAA
TTTTCTCTTCCAATGGACTTTGGCGGCAAGGCGAAGAGAGGCGTCGCCGGCAGAAGGGGCGGCGGCGGTCCCAAGAAGAAGCCTGTCTCTCGCTCCGTCAAAGCCGGCCT
CCAGTTTCCCGTCGGCAGAATCGGCCGCTACTTGAAGAATGGCCGCTACTCACGACGGGTCGGAACTGGCGCTCCGGTTTACCTTGCTGCTGTGCTTGAGTACCTCGCTG
CAGAGGTTTTGGAACTGGCTGGGAATGCAGCAAGAGACAACAAGAAGAACAGGATCATCCCGAGACATGTCCTTTTGGCTGTGAGGAACGACGAGGAACTCGGGAAGCTT
CTTGCTGGGGTGACGATCGCTCATGGTGGGGTGCTTCCGAATATCAACCCTGTCCTTCTTCCAAAGAAATCTGAGAGAGCAGCAGCAGCAAAGGAGCCCAAGTCTCCCTC
CAAGGGCACCAAGTCCCCAAAGAAGGCCTAGCTTAGCTTCTCATATGCCCCCACCTACTTAATTCTGTATTTAGATTGAACTTTATCTTCATGTTTAGGACCACTTTATA
TTGTAGGACATTCCTTTGTGTTCTCACAACGTAGTTGAAATGATGTAAGATTTAACCTCTCTTATGAATCTCTGTATTTTCTCCACTAATGGGTTAATGTATGTGATGTA
AAAAATTATAAAATCATTAGTATGTTTTAGTTAA
Protein sequenceShow/hide protein sequence
MDFGGKAKRGVAGRRGGGGPKKKPVSRSVKAGLQFPVGRIGRYLKNGRYSRRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGV
TIAHGGVLPNINPVLLPKKSERAAAAKEPKSPSKGTKSPKKA