; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi01G014230 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G014230
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionCyclin-dependent protein kinase inhibitor SMR3-like
Genome locationchr01:12374709..12375158
RNA-Seq ExpressionLsi01G014230
SyntenyLsi01G014230
Gene Ontology termsGO:0032875 - regulation of DNA endoreduplication (biological process)
GO:0045839 - negative regulation of mitotic nuclear division (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032644.1 cyclin-dependent protein kinase inhibitor SMR3-like [Cucumis melo var. makuwa]3.2e-3764.71Show/hide
Query:  MASEFQEISLTLPDPISLSPITPHSFRLNQIDFIFS--LNTPPPPPPLASHSDSLH-EPAQSISAVHDDDD-NDGFRTPISSDHKIPVLRQCPPAPRRPK
        M SEFQEIS   P P+    I+    RL+ IDF+F    ++   PP L S SDS+  +P  SISAV DD++ +DGF TPISS HKIPV+  CPPAP RPK
Subjt:  MASEFQEISLTLPDPISLSPITPHSFRLNQIDFIFS--LNTPPPPPPLASHSDSLH-EPAQSISAVHDDDD-NDGFRTPISSDHKIPVLRQCPPAPRRPK

Query:  PISLSRTSSTRASRVRRGFRVYISDEIVDSIFCSDLLHQKSKKARKDDDNGGE
        PISLSRT S RAS VRRGF VYISDEIVDSIF  DLLH KSKKARKDDDNGGE
Subjt:  PISLSRTSSTRASRVRRGFRVYISDEIVDSIFCSDLLHQKSKKARKDDDNGGE

KAE8649529.1 hypothetical protein Csa_017979 [Cucumis sativus]3.6e-3665.36Show/hide
Query:  MASEFQEISLTLPDPISLSPITPHSFRLNQIDFIF----SLNTPPPPPPLASHSDSLHEPAQSISAVHDDDD-NDGFRTPISSDHKIPVLRQCPPAPRRP
        MASEFQEIS   P P+ L        RL+ IDF+F    S++TPP   P  S S    +P  SISAV DDD+ NDGF TPISS HKIPV+  CPPAP RP
Subjt:  MASEFQEISLTLPDPISLSPITPHSFRLNQIDFIF----SLNTPPPPPPLASHSDSLHEPAQSISAVHDDDD-NDGFRTPISSDHKIPVLRQCPPAPRRP

Query:  KPISLSRTSSTRASRVRRGFRVYISDEIVDSIFCSDLLHQKS-KKARKDDDNG
        KPISLSRT S RAS VRRGF VYISD+IVDSIF  DLLHQKS KKARKDDDNG
Subjt:  KPISLSRTSSTRASRVRRGFRVYISDEIVDSIFCSDLLHQKS-KKARKDDDNG

KAG6603657.1 Cyclin-dependent protein kinase inhibitor SMR3, partial [Cucurbita argyrosperma subsp. sororia]1.8e-3564.38Show/hide
Query:  MASEFQEISLTLPDPISLSPI-TPHSFRL------NQIDFIFSLNTPPPPPPLASHSDSL----HEPAQSISAVHDDDDNDGFRTPISSDHKIPVLRQCP
        MAS FQEIS      IS + I TP SFR+      NQIDFIF+LN     PPLAS S S+      P  SIS     DD+DGFRTP SSDHKIPV++QCP
Subjt:  MASEFQEISLTLPDPISLSPI-TPHSFRL------NQIDFIFSLNTPPPPPPLASHSDSL----HEPAQSISAVHDDDDNDGFRTPISSDHKIPVLRQCP

Query:  PAPRRPKPISLSRTSSTRASRVRRGFRVYISDEIVDSIFCSDLLHQKSKKARKDDDNGGE
        PAPRRPKPIS SRT   R S VRRGFRVYISDEI DSIFC DLLHQK+KKARK + NGGE
Subjt:  PAPRRPKPISLSRTSSTRASRVRRGFRVYISDEIVDSIFCSDLLHQKSKKARKDDDNGGE

XP_022950456.1 uncharacterized protein LOC111453550 [Cucurbita moschata]1.8e-3564.38Show/hide
Query:  MASEFQEISLTLPDPISLSPI-TPHSFRL------NQIDFIFSLNTPPPPPPLASHSDSL----HEPAQSISAVHDDDDNDGFRTPISSDHKIPVLRQCP
        MAS FQEIS      IS + I TP SFR+      NQIDFIF+LN     PPLAS S S+      P  SIS     DD+DGFRTP SSDHKIPV++QCP
Subjt:  MASEFQEISLTLPDPISLSPI-TPHSFRL------NQIDFIFSLNTPPPPPPLASHSDSL----HEPAQSISAVHDDDDNDGFRTPISSDHKIPVLRQCP

Query:  PAPRRPKPISLSRTSSTRASRVRRGFRVYISDEIVDSIFCSDLLHQKSKKARKDDDNGGE
        PAPRRPKPIS SRT   R S VRRGFRVYISDEI DSIFC DLLHQK+KKARK + NGGE
Subjt:  PAPRRPKPISLSRTSSTRASRVRRGFRVYISDEIVDSIFCSDLLHQKSKKARKDDDNGGE

XP_038877666.1 cyclin-dependent protein kinase inhibitor SMR3-like [Benincasa hispida]9.6e-5078.95Show/hide
Query:  MASEFQEISLTLPDPISLSPITPH-SFRLNQIDFIFSLNTPPPPPPLASHSDSLHEPAQSISAVHDDDDNDGFRTPISSDHKIPVLRQCPPAPRRPKPIS
        MASEFQEISLTLPD IS S ITP  +FRLNQIDFIFSLN  P         D L  PA+SISAV  DDD+DGFRTP+SSDHKIPV+R CPPAP+RPKPIS
Subjt:  MASEFQEISLTLPDPISLSPITPH-SFRLNQIDFIFSLNTPPPPPPLASHSDSLHEPAQSISAVHDDDDNDGFRTPISSDHKIPVLRQCPPAPRRPKPIS

Query:  LSRTSSTRASRVRRGFRVYISDEIVDSIFCSDLLHQKS-KKARK-DDDNGGE
        LSRTSS RAS VRRGFRVYISDEIVDSIFCSDLLHQKS KKARK DDDNGGE
Subjt:  LSRTSSTRASRVRRGFRVYISDEIVDSIFCSDLLHQKS-KKARK-DDDNGGE

TrEMBL top hitse value%identityAlignment
A0A0A0KZJ9 Uncharacterized protein1.2e-3765.81Show/hide
Query:  MASEFQEISLTLPDPISLSPITPHSFRLNQIDFIF----SLNTPPPPPPLASHSDSLHEPAQSISAVHDDDD-NDGFRTPISSDHKIPVLRQCPPAPRRP
        MASEFQEIS   P P+ L        RL+ IDF+F    S++TPP   P  S S    +P  SISAV DDD+ NDGF TPISS HKIPV+  CPPAP RP
Subjt:  MASEFQEISLTLPDPISLSPITPHSFRLNQIDFIF----SLNTPPPPPPLASHSDSLHEPAQSISAVHDDDD-NDGFRTPISSDHKIPVLRQCPPAPRRP

Query:  KPISLSRTSSTRASRVRRGFRVYISDEIVDSIFCSDLLHQKS-KKARKDDDNGGE
        KPISLSRT S RAS VRRGF VYISD+IVDSIF  DLLHQKS KKARKDDDNGGE
Subjt:  KPISLSRTSSTRASRVRRGFRVYISDEIVDSIFCSDLLHQKS-KKARKDDDNGGE

A0A5A7SN91 Cyclin-dependent protein kinase inhibitor SMR3-like1.6e-3764.71Show/hide
Query:  MASEFQEISLTLPDPISLSPITPHSFRLNQIDFIFS--LNTPPPPPPLASHSDSLH-EPAQSISAVHDDDD-NDGFRTPISSDHKIPVLRQCPPAPRRPK
        M SEFQEIS   P P+    I+    RL+ IDF+F    ++   PP L S SDS+  +P  SISAV DD++ +DGF TPISS HKIPV+  CPPAP RPK
Subjt:  MASEFQEISLTLPDPISLSPITPHSFRLNQIDFIFS--LNTPPPPPPLASHSDSLH-EPAQSISAVHDDDD-NDGFRTPISSDHKIPVLRQCPPAPRRPK

Query:  PISLSRTSSTRASRVRRGFRVYISDEIVDSIFCSDLLHQKSKKARKDDDNGGE
        PISLSRT S RAS VRRGF VYISDEIVDSIF  DLLH KSKKARKDDDNGGE
Subjt:  PISLSRTSSTRASRVRRGFRVYISDEIVDSIFCSDLLHQKSKKARKDDDNGGE

A0A5D2MEF8 Uncharacterized protein2.3e-1250Show/hide
Query:  SAVHDDDDNDGFRTPISSDHKIPVLRQCPPAPRRPKPISLSR---TSSTRASRVRRGFRVYISDEIVDSIFCSDLL---HQKSKKARKDDDN
        S  +DD D+DGF+TP S DHKIPV++QCPPAPR+PKP+S ++   +S   +S  R   ++  + E V+S+F SD+L   H+K KKARK+D N
Subjt:  SAVHDDDDNDGFRTPISSDHKIPVLRQCPPAPRRPKPISLSR---TSSTRASRVRRGFRVYISDEIVDSIFCSDLL---HQKSKKARKDDDN

A0A6J1CQ22 cyclin-dependent protein kinase inhibitor SMR2-like5.7e-3260.53Show/hide
Query:  MASEFQEISLTLPDPISLSPITPHSFRL------NQIDFIFSLNTPPPPPPLASHSDSLHEPAQSISAVHDDDDNDGFRTPISSDHKIPVLRQCPPAPRR
        MAS FQEISL+    ISL  I+P SF L      NQIDF+F+LNT          +        SISA     D+DGFRTP SSDHKIPV++QCPPAPRR
Subjt:  MASEFQEISLTLPDPISLSPITPHSFRL------NQIDFIFSLNTPPPPPPLASHSDSLHEPAQSISAVHDDDDNDGFRTPISSDHKIPVLRQCPPAPRR

Query:  PKPISL-SRTSSTR-ASRVRRGFRVYISDEIVDSIFCSDLLHQKSKKARKDD
        PKPIS  SR SS R AS VRRGFRVYISDEIV+SIF S   HQK KKAR+DD
Subjt:  PKPISL-SRTSSTR-ASRVRRGFRVYISDEIVDSIFCSDLLHQKSKKARKDD

A0A6J1GEW0 uncharacterized protein LOC1114535508.6e-3664.38Show/hide
Query:  MASEFQEISLTLPDPISLSPI-TPHSFRL------NQIDFIFSLNTPPPPPPLASHSDSL----HEPAQSISAVHDDDDNDGFRTPISSDHKIPVLRQCP
        MAS FQEIS      IS + I TP SFR+      NQIDFIF+LN     PPLAS S S+      P  SIS     DD+DGFRTP SSDHKIPV++QCP
Subjt:  MASEFQEISLTLPDPISLSPI-TPHSFRL------NQIDFIFSLNTPPPPPPLASHSDSL----HEPAQSISAVHDDDDNDGFRTPISSDHKIPVLRQCP

Query:  PAPRRPKPISLSRTSSTRASRVRRGFRVYISDEIVDSIFCSDLLHQKSKKARKDDDNGGE
        PAPRRPKPIS SRT   R S VRRGFRVYISDEI DSIFC DLLHQK+KKARK + NGGE
Subjt:  PAPRRPKPISLSRTSSTRASRVRRGFRVYISDEIVDSIFCSDLLHQKSKKARKDDDNGGE

SwissProt top hitse value%identityAlignment
Q9LZ60 Cyclin-dependent protein kinase inhibitor SMR33.7e-0439.77Show/hide
Query:  HDD---DDNDGFRTPISSDHKIPVLRQ--CPPAPRRPKPISLSRTSSTRAS----RVRRGFRVYISDEIVDSIFCSDLLHQKSKKARK
        H+D   ++ +G +TP SSDHKIP ++   CPPAPR+PKP   +R+S T+       V     + +S EI   +F  D L ++ KK+RK
Subjt:  HDD---DDNDGFRTPISSDHKIPVLRQ--CPPAPRRPKPISLSRTSSTRAS----RVRRGFRVYISDEIVDSIFCSDLLHQKSKKARK

Q9SGE2 Cyclin-dependent protein kinase inhibitor SMR29.8e-0538.81Show/hide
Query:  TPISSDHKIPVLRQCPPAPRRPKPISLSRTSSTRASRVRRGFRVY-ISDEIVDSIFCSDLLHQKSKK
        TP SSDHKIP +  CPP PR+ +P  +S T  TR S+  R F    +  + V+++F  +  H + K+
Subjt:  TPISSDHKIPVLRQCPPAPRRPKPISLSRTSSTRASRVRRGFRVY-ISDEIVDSIFCSDLLHQKSKK

Arabidopsis top hitse value%identityAlignment
AT1G08180.1 unknown protein7.0e-0638.81Show/hide
Query:  TPISSDHKIPVLRQCPPAPRRPKPISLSRTSSTRASRVRRGFRVY-ISDEIVDSIFCSDLLHQKSKK
        TP SSDHKIP +  CPP PR+ +P  +S T  TR S+  R F    +  + V+++F  +  H + K+
Subjt:  TPISSDHKIPVLRQCPPAPRRPKPISLSRTSSTRASRVRRGFRVY-ISDEIVDSIFCSDLLHQKSKK

AT2G37610.1 unknown protein5.0e-0448.28Show/hide
Query:  DDDNDGFRTPISSDHKIPVLRQCPPAPRR
        +++NDGF+TP   +++IP++R+CPPAP +
Subjt:  DDDNDGFRTPISSDHKIPVLRQCPPAPRR

AT5G02420.1 unknown protein2.7e-0539.77Show/hide
Query:  HDD---DDNDGFRTPISSDHKIPVLRQ--CPPAPRRPKPISLSRTSSTRAS----RVRRGFRVYISDEIVDSIFCSDLLHQKSKKARK
        H+D   ++ +G +TP SSDHKIP ++   CPPAPR+PKP   +R+S T+       V     + +S EI   +F  D L ++ KK+RK
Subjt:  HDD---DDNDGFRTPISSDHKIPVLRQ--CPPAPRRPKPISLSRTSSTRAS----RVRRGFRVYISDEIVDSIFCSDLLHQKSKKARK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTCAGAATTCCAAGAAATCTCCCTCACTCTCCCTGATCCGATTTCTTTATCCCCCATTACGCCACATTCCTTCCGCCTCAACCAGATCGACTTCATTTTCTCTCT
AAATACTCCTCCTCCTCCTCCTCCTCTCGCCTCCCATTCCGATTCCCTTCATGAACCAGCCCAGTCCATCTCCGCCGTTCACGACGACGACGACAACGACGGTTTCAGAA
CTCCGATCTCTTCAGATCATAAGATTCCTGTGCTTCGACAGTGTCCGCCGGCTCCTAGAAGACCCAAACCGATCTCCTTGTCCAGAACCTCCTCGACGAGAGCTTCACGC
GTTCGCAGAGGTTTTCGAGTGTATATCTCAGACGAAATCGTCGATTCGATCTTCTGCTCCGATTTGCTGCATCAGAAGTCTAAGAAAGCTCGGAAGGACGATGATAATGG
CGGTGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCTCAGAATTCCAAGAAATCTCCCTCACTCTCCCTGATCCGATTTCTTTATCCCCCATTACGCCACATTCCTTCCGCCTCAACCAGATCGACTTCATTTTCTCTCT
AAATACTCCTCCTCCTCCTCCTCCTCTCGCCTCCCATTCCGATTCCCTTCATGAACCAGCCCAGTCCATCTCCGCCGTTCACGACGACGACGACAACGACGGTTTCAGAA
CTCCGATCTCTTCAGATCATAAGATTCCTGTGCTTCGACAGTGTCCGCCGGCTCCTAGAAGACCCAAACCGATCTCCTTGTCCAGAACCTCCTCGACGAGAGCTTCACGC
GTTCGCAGAGGTTTTCGAGTGTATATCTCAGACGAAATCGTCGATTCGATCTTCTGCTCCGATTTGCTGCATCAGAAGTCTAAGAAAGCTCGGAAGGACGATGATAATGG
CGGTGAATGA
Protein sequenceShow/hide protein sequence
MASEFQEISLTLPDPISLSPITPHSFRLNQIDFIFSLNTPPPPPPLASHSDSLHEPAQSISAVHDDDDNDGFRTPISSDHKIPVLRQCPPAPRRPKPISLSRTSSTRASR
VRRGFRVYISDEIVDSIFCSDLLHQKSKKARKDDDNGGE