CuGenDBv2

Gene ID	Lsi01G014340
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	Suppressor of disruption of TFIIS-like
Genome location	chr01:12506902..12512141
RNA-Seq Expression	Lsi01G014340
Synteny	Lsi01G014340
Gene Ontology terms	NA
InterPro domains	IPR010237 - Pyrimidine 5-nucleotidase IPR023214 - HAD superfamily IPR036412 - HAD-like superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

TYK23541.1 suppressor of disruption of TFIIS-like [Cucumis melo var. makuwa]

1.9e-86

73.39

Show/hide

Query:  DLDDTLYPLSSGLATACKSNIHAYMAEKLGIENSKIPELSNLLYKNYGTTMAGLRAIGYDFDCDEYH-----RLPYDNLKPDPILRNLLLSLPYRKLIFT
        DLDDTLYPLSSGLATACK+NIHAY+AEKLG+E SKIPELSNLLYKNYGTTMAGLRAIGYDFD DEYH     RLPYDNLKPDPILRNLLL+LPYRKLIFT
Subjt:  DLDDTLYPLSSGLATACKSNIHAYMAEKLGIENSKIPELSNLLYKNYGTTMAGLRAIGYDFDCDEYH-----RLPYDNLKPDPILRNLLLSLPYRKLIFT

Query:  NADKDHTAKVLNKLGLEDCFEGIICFETLNPTQKSPVLDEKEH-PTNEIFDIIDHFSQPN-PLMGLPITPI-----------------------------
        NADKDHTAKVLNKLGLEDCFEGIICFETLNP QKS VLDEKEH P++EIFDII HFSQPN PLM LPITPI                             
Subjt:  NADKDHTAKVLNKLGLEDCFEGIICFETLNPTQKSPVLDEKEH-PTNEIFDIIDHFSQPN-PLMGLPITPI-----------------------------

Query:  ---------------EAIPELGEVELMKSELNYSA-NNNVAVETSVTA
                       EAIPEL EVE MKSELNYSA NNNVAVETSVTA
Subjt:  ---------------EAIPELGEVELMKSELNYSA-NNNVAVETSVTA

XP_004142063.1 uncharacterized protein C24B11.05 [Cucumis sativus]

3.4e-96

69.62

Show/hide

Query:  MEYDKCYRSSKAQIPNFDCLLFDLDDTLYPLSSGLATACKSNIHAYMAEKLGIENSKIPELSNLLYKNYGTTMAGLRAIGYDFDCDEYH-----RLPYDN
        MEYDKCYR SKAQIPNFDCLLFDLDDTLYPLSSGLATACK+NIHAYMAEKLG+ENSKIPELSNLLYKNYGTTMAGLRAIGYDFD DEYH     RLPYDN
Subjt:  MEYDKCYRSSKAQIPNFDCLLFDLDDTLYPLSSGLATACKSNIHAYMAEKLGIENSKIPELSNLLYKNYGTTMAGLRAIGYDFDCDEYH-----RLPYDN

Query:  LKPDPILRNLLLSLPYRKLIFTNADKDHTAKVLNKLGLEDCFEGIICFETLN-PTQKSPVLDEKEH-PTNEIFDIIDHFSQPN-PLMGLPITPI------
        LKPDPILRNLLLSLPYRKLIFTNAD+DHTAKVLNKLGLEDCFEGIICFETLN P QKS VLDEKEH P++E+FDII HFSQPN PLM LPITPI      
Subjt:  LKPDPILRNLLLSLPYRKLIFTNADKDHTAKVLNKLGLEDCFEGIICFETLN-PTQKSPVLDEKEH-PTNEIFDIIDHFSQPN-PLMGLPITPI------

Query:  ------------------------------------------------------------EAIPELGEVELMKSELNYSANNN-VAVETSVTA
                                                                    EAIPEL EVE MKSELNYSANNN VAVETSVTA
Subjt:  ------------------------------------------------------------EAIPELGEVELMKSELNYSANNN-VAVETSVTA

XP_008448042.1 PREDICTED: uncharacterized protein C24B11.05-like isoform X1 [Cucumis melo]

1.5e-96

69.52

Show/hide

Query:  MEYDKCYRSSKAQIPNFDCLLFDLDDTLYPLSSGLATACKSNIHAYMAEKLGIENSKIPELSNLLYKNYGTTMAGLRAIGYDFDCDEYH-----RLPYDN
        MEYDKCYR SKAQIPNFDCLLFDLDDTLYPLSSGLATACK+NIHAY+AEKLG+E SKIPELSNLLYKNYGTTMAGLRAIGYDFD DEYH     RLPYDN
Subjt:  MEYDKCYRSSKAQIPNFDCLLFDLDDTLYPLSSGLATACKSNIHAYMAEKLGIENSKIPELSNLLYKNYGTTMAGLRAIGYDFDCDEYH-----RLPYDN

Query:  LKPDPILRNLLLSLPYRKLIFTNADKDHTAKVLNKLGLEDCFEGIICFETLNPTQKSPVLDEKEH-PTNEIFDIIDHFSQPN-PLMGLPITPI-------
        LKPDPILRNLLL+LPYRKLIFTNADKDHTAKVLNKLGLEDCFEGIICFETLNP QKS VLDEKEH P++EIFDII HFSQPN PLM LPITPI       
Subjt:  LKPDPILRNLLLSLPYRKLIFTNADKDHTAKVLNKLGLEDCFEGIICFETLNPTQKSPVLDEKEH-PTNEIFDIIDHFSQPN-PLMGLPITPI-------

Query:  -----------------------------------------------------------EAIPELGEVELMKSELNYSA-NNNVAVETSVTA
                                                                   EAIPEL EVE MKSELNYSA NNNVAVETSVTA
Subjt:  -----------------------------------------------------------EAIPELGEVELMKSELNYSA-NNNVAVETSVTA

XP_008448051.1 PREDICTED: uncharacterized protein C24B11.05-like isoform X2 [Cucumis melo]

6.1e-93

79.82

Show/hide

Query:  MEYDKCYRSSKAQIPNFDCLLFDLDDTLYPLSSGLATACKSNIHAYMAEKLGIENSKIPELSNLLYKNYGTTMAGLRAIGYDFDCDEYH-----RLPYDN
        MEYDKCYR SKAQIPNFDCLLFDLDDTLYPLSSGLATACK+NIHAY+AEKLG+E SKIPELSNLLYKNYGTTMAGLRAIGYDFD DEYH     RLPYDN
Subjt:  MEYDKCYRSSKAQIPNFDCLLFDLDDTLYPLSSGLATACKSNIHAYMAEKLGIENSKIPELSNLLYKNYGTTMAGLRAIGYDFDCDEYH-----RLPYDN

Query:  LKPDPILRNLLLSLPYRKLIFTNADKDHTAKVLNKLGLEDCFEGIICFETLNPTQKSPVLDEKEH-PTNEIFDIIDHFSQPN-PLMGLPITPIEAIPELG
        LKPDPILRNLLL+LPYRKLIFTNADKDHTAKVLNKLGLEDCFEGIICFETLNP QKS VLDEKEH P++EIFDII HFSQPN PLM LPITPI   P   
Subjt:  LKPDPILRNLLLSLPYRKLIFTNADKDHTAKVLNKLGLEDCFEGIICFETLNPTQKSPVLDEKEH-PTNEIFDIIDHFSQPN-PLMGLPITPIEAIPELG

Query:  EVELMKSELNYSANNNVAVETSV
         +E      N      +  E S+
Subjt:  EVELMKSELNYSANNNVAVETSV

XP_038881258.1 uncharacterized protein C24B11.05-like [Benincasa hispida]

1.0e-103

71.28

Show/hide

Query:  MEYDKCYRSSKAQIPNFDCLLFDLDDTLYPLSSGLATACKSNIHAYMAEKLGIENSKIPELSNLLYKNYGTTMAGLRAIGYDFDCDEYH-----RLPYDN
        MEYDKCY+ SKAQIPNFDCLLFDLDDTLYPLSSGLATACK+NIHAYMAEKL IENSKIPELSNLLYKNYGTTMAGLRAIGY+FD DEYH     RLPYDN
Subjt:  MEYDKCYRSSKAQIPNFDCLLFDLDDTLYPLSSGLATACKSNIHAYMAEKLGIENSKIPELSNLLYKNYGTTMAGLRAIGYDFDCDEYH-----RLPYDN

Query:  LKPDPILRNLLLSLPYRKLIFTNADKDHTAKVLNKLGLEDCFEGIICFETLNPTQKSPVLDEKEHPTNEIFDIIDHFSQPNPLMGLPITPI---------
        LKPDPILRNLLLSLPYRKLIFTNADKDHTAKVLNKLGLEDCFEGIICFETLNPTQKSPVLDEKEHP+ EIFDII HF QPNPLM LPITPI         
Subjt:  LKPDPILRNLLLSLPYRKLIFTNADKDHTAKVLNKLGLEDCFEGIICFETLNPTQKSPVLDEKEHPTNEIFDIIDHFSQPNPLMGLPITPI---------

Query:  ---------------------------------------------------------EAIPELGEVELMKSELNYSANNNVAVETSVTA
                                                                 EAIPELGEVEL KSELNYSANNNVAVETSVTA
Subjt:  ---------------------------------------------------------EAIPELGEVELMKSELNYSANNNVAVETSVTA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KX85 Uncharacterized protein

1.7e-96

69.62

Show/hide

Query:  MEYDKCYRSSKAQIPNFDCLLFDLDDTLYPLSSGLATACKSNIHAYMAEKLGIENSKIPELSNLLYKNYGTTMAGLRAIGYDFDCDEYH-----RLPYDN
        MEYDKCYR SKAQIPNFDCLLFDLDDTLYPLSSGLATACK+NIHAYMAEKLG+ENSKIPELSNLLYKNYGTTMAGLRAIGYDFD DEYH     RLPYDN
Subjt:  MEYDKCYRSSKAQIPNFDCLLFDLDDTLYPLSSGLATACKSNIHAYMAEKLGIENSKIPELSNLLYKNYGTTMAGLRAIGYDFDCDEYH-----RLPYDN

Query:  LKPDPILRNLLLSLPYRKLIFTNADKDHTAKVLNKLGLEDCFEGIICFETLN-PTQKSPVLDEKEH-PTNEIFDIIDHFSQPN-PLMGLPITPI------
        LKPDPILRNLLLSLPYRKLIFTNAD+DHTAKVLNKLGLEDCFEGIICFETLN P QKS VLDEKEH P++E+FDII HFSQPN PLM LPITPI      
Subjt:  LKPDPILRNLLLSLPYRKLIFTNADKDHTAKVLNKLGLEDCFEGIICFETLN-PTQKSPVLDEKEH-PTNEIFDIIDHFSQPN-PLMGLPITPI------

Query:  ------------------------------------------------------------EAIPELGEVELMKSELNYSANNN-VAVETSVTA
                                                                    EAIPEL EVE MKSELNYSANNN VAVETSVTA
Subjt:  ------------------------------------------------------------EAIPELGEVELMKSELNYSANNN-VAVETSVTA

A0A1S3BIS9 uncharacterized protein C24B11.05-like isoform X1

7.5e-97

69.52

Show/hide

Query:  MEYDKCYRSSKAQIPNFDCLLFDLDDTLYPLSSGLATACKSNIHAYMAEKLGIENSKIPELSNLLYKNYGTTMAGLRAIGYDFDCDEYH-----RLPYDN
        MEYDKCYR SKAQIPNFDCLLFDLDDTLYPLSSGLATACK+NIHAY+AEKLG+E SKIPELSNLLYKNYGTTMAGLRAIGYDFD DEYH     RLPYDN
Subjt:  MEYDKCYRSSKAQIPNFDCLLFDLDDTLYPLSSGLATACKSNIHAYMAEKLGIENSKIPELSNLLYKNYGTTMAGLRAIGYDFDCDEYH-----RLPYDN

Query:  LKPDPILRNLLLSLPYRKLIFTNADKDHTAKVLNKLGLEDCFEGIICFETLNPTQKSPVLDEKEH-PTNEIFDIIDHFSQPN-PLMGLPITPI-------
        LKPDPILRNLLL+LPYRKLIFTNADKDHTAKVLNKLGLEDCFEGIICFETLNP QKS VLDEKEH P++EIFDII HFSQPN PLM LPITPI       
Subjt:  LKPDPILRNLLLSLPYRKLIFTNADKDHTAKVLNKLGLEDCFEGIICFETLNPTQKSPVLDEKEH-PTNEIFDIIDHFSQPN-PLMGLPITPI-------

Query:  -----------------------------------------------------------EAIPELGEVELMKSELNYSA-NNNVAVETSVTA
                                                                   EAIPEL EVE MKSELNYSA NNNVAVETSVTA
Subjt:  -----------------------------------------------------------EAIPELGEVELMKSELNYSA-NNNVAVETSVTA

A0A1S3BJF2 uncharacterized protein C24B11.05-like isoform X2

2.9e-93

79.82

Show/hide

Query:  MEYDKCYRSSKAQIPNFDCLLFDLDDTLYPLSSGLATACKSNIHAYMAEKLGIENSKIPELSNLLYKNYGTTMAGLRAIGYDFDCDEYH-----RLPYDN
        MEYDKCYR SKAQIPNFDCLLFDLDDTLYPLSSGLATACK+NIHAY+AEKLG+E SKIPELSNLLYKNYGTTMAGLRAIGYDFD DEYH     RLPYDN
Subjt:  MEYDKCYRSSKAQIPNFDCLLFDLDDTLYPLSSGLATACKSNIHAYMAEKLGIENSKIPELSNLLYKNYGTTMAGLRAIGYDFDCDEYH-----RLPYDN

Query:  LKPDPILRNLLLSLPYRKLIFTNADKDHTAKVLNKLGLEDCFEGIICFETLNPTQKSPVLDEKEH-PTNEIFDIIDHFSQPN-PLMGLPITPIEAIPELG
        LKPDPILRNLLL+LPYRKLIFTNADKDHTAKVLNKLGLEDCFEGIICFETLNP QKS VLDEKEH P++EIFDII HFSQPN PLM LPITPI   P   
Subjt:  LKPDPILRNLLLSLPYRKLIFTNADKDHTAKVLNKLGLEDCFEGIICFETLNPTQKSPVLDEKEH-PTNEIFDIIDHFSQPN-PLMGLPITPIEAIPELG

Query:  EVELMKSELNYSANNNVAVETSV
         +E      N      +  E S+
Subjt:  EVELMKSELNYSANNNVAVETSV

A0A5D3DIP0 Suppressor of disruption of TFIIS-like

9.1e-87

73.39

Show/hide

Query:  DLDDTLYPLSSGLATACKSNIHAYMAEKLGIENSKIPELSNLLYKNYGTTMAGLRAIGYDFDCDEYH-----RLPYDNLKPDPILRNLLLSLPYRKLIFT
        DLDDTLYPLSSGLATACK+NIHAY+AEKLG+E SKIPELSNLLYKNYGTTMAGLRAIGYDFD DEYH     RLPYDNLKPDPILRNLLL+LPYRKLIFT
Subjt:  DLDDTLYPLSSGLATACKSNIHAYMAEKLGIENSKIPELSNLLYKNYGTTMAGLRAIGYDFDCDEYH-----RLPYDNLKPDPILRNLLLSLPYRKLIFT

Query:  NADKDHTAKVLNKLGLEDCFEGIICFETLNPTQKSPVLDEKEH-PTNEIFDIIDHFSQPN-PLMGLPITPI-----------------------------
        NADKDHTAKVLNKLGLEDCFEGIICFETLNP QKS VLDEKEH P++EIFDII HFSQPN PLM LPITPI                             
Subjt:  NADKDHTAKVLNKLGLEDCFEGIICFETLNPTQKSPVLDEKEH-PTNEIFDIIDHFSQPN-PLMGLPITPI-----------------------------

Query:  ---------------EAIPELGEVELMKSELNYSA-NNNVAVETSVTA
                       EAIPEL EVE MKSELNYSA NNNVAVETSVTA
Subjt:  ---------------EAIPELGEVELMKSELNYSA-NNNVAVETSVTA

A0A6J1CQH0 uncharacterized protein LOC111013642

2.9e-85

60.69

Show/hide

Query:  MEYDKCYRSSKAQIPNFDCLLFDLDDTLYPLSSGLATACKSNIHAYMAEKLGIENSKIPELSNLLYKNYGTTMAGLRAIGYDFDCDEYH-----RLPYDN
        ME+DKCYR  K ++P FDCLLFDLDDTLYP+SSG+A ACK+NI AY+AEKLGI  +KIPELSNLLYKNYGTTMAGLRAIGYDFD DEYH     RLPYDN
Subjt:  MEYDKCYRSSKAQIPNFDCLLFDLDDTLYPLSSGLATACKSNIHAYMAEKLGIENSKIPELSNLLYKNYGTTMAGLRAIGYDFDCDEYH-----RLPYDN

Query:  LKPDPILRNLLLSLPYRKLIFTNADKDHTAKVLNKLGLEDCFEGIICFETLNPTQKSPV-LDEKEHPTNEIFDIIDHFSQPNPLMGLPITPI--------
        LKPDPILR+LLLSLPY KLIFTNAD+ HTAKVLNKLGLEDCFEGIICFETLNPTQ+ PV + EK+  ++EIFDII HFSQP+PL+GLP TP+        
Subjt:  LKPDPILRNLLLSLPYRKLIFTNADKDHTAKVLNKLGLEDCFEGIICFETLNPTQKSPV-LDEKEHPTNEIFDIIDHFSQPNPLMGLPITPI--------

Query:  ----------------------------------------------------------EAIPELGEVELMKSELNYSANNNVAVETSVTA
                                                                  EAIPEL +VE MKSE+NYS NN VAV+TSVTA
Subjt:  ----------------------------------------------------------EAIPELGEVELMKSELNYSANNNVAVETSVTA

SwissProt top hits

e value

%identity

Alignment

P53078 Suppressor of disruption of TFIIS

3.2e-12

32.87

Show/hide

Query:  SSKAQIPNFDCLLFDLDDTLYPLSSGLATACKSNIHAYMAEKLGIENSKIPELSNLLYKNYGTTMAGLRAIGYDFDCDEYHRLPYDN------LKPDPIL
        S+  Q PN     FD+D+ LY  S+ +    + +I  +    L +       L+N  YK YG  + GL  + +  +  EY+RL  D+      LKPD  L
Subjt:  SSKAQIPNFDCLLFDLDDTLYPLSSGLATACKSNIHAYMAEKLGIENSKIPELSNLLYKNYGTTMAGLRAIGYDFDCDEYHRLPYDN------LKPDPIL

Query:  RNLLLSLPY-----RKLIFTNADKDHTAKVLNKLGLEDCFEGI
        RN+LL L       +  +FTNA K+H  + L  LG+ D F+G+
Subjt:  RNLLLSLPY-----RKLIFTNADKDHTAKVLNKLGLEDCFEGI

Q09893 Uncharacterized protein C24B11.05

1.1e-15

38.46

Show/hide

Query:  LLFDLDDTLYPLSSGLATACKSNIHAYMAEKLGIENSKIPELSNLLYKNYGTTMAGL------RAIGYDFDCDEYHRLPYDN-LKPDPILRNLLLSL--P
        + FDLD+ LYP S  +     + I A+ ++KLGI   +   L  + Y++YG  + GL       A+ YD   D+   LP +  +K D +LR +LL L   
Subjt:  LLFDLDDTLYPLSSGLATACKSNIHAYMAEKLGIENSKIPELSNLLYKNYGTTMAGL------RAIGYDFDCDEYHRLPYDN-LKPDPILRNLLLSL--P

Query:  YRKLIFTNADKDHTAKVLNKLGLEDCFEGI
        Y+  IFTNA   H  +VL  LG+EDCF+GI
Subjt:  YRKLIFTNADKDHTAKVLNKLGLEDCFEGI

Arabidopsis top hits

e value

%identity

Alignment

AT3G62040.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein

2.2e-53

64.79

Show/hide

Query:  NFDCLLFDLDDTLYPLSSGLATACKSNIHAYMAEKLGIENSKIPELSNLLYKNYGTTMAGLRAIGYDFDCDEYH-----RLPYDNLKPDPILRNLLLSLP
        N++CL FD+DDTLYPLS G+  AC++NI  +M  +LGIE S++P+L   LYK YGTTMAGL+ +GY+FD DE+H     RLPY+ LKPDP+LRNLLLS+P
Subjt:  NFDCLLFDLDDTLYPLSSGLATACKSNIHAYMAEKLGIENSKIPELSNLLYKNYGTTMAGLRAIGYDFDCDEYH-----RLPYDNLKPDPILRNLLLSLP

Query:  YRKLIFTNADKDHTAKVLNKLGLEDCFEGIICFETLNPTQKS
        +RK+IFTNADK H  + LN+LGLEDCFEGIICFETLNP+  S
Subjt:  YRKLIFTNADKDHTAKVLNKLGLEDCFEGIICFETLNPTQKS

AT5G02230.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein

2.6e-65

57.47

Show/hide

Query:  MEYDKCYRSSKAQIPNFDCLLFDLDDTLYPLSSGLATACKSNIHAYMAEKLGIENSKIPELSNLLYKNYGTTMAGLRAIGYDFDCDEYH-----RLPYDN
        ME++  Y  + +Q   +DCLLFDLDDTLYPLSSG+A  C +NI  YM EKLGI   KI ELS+LLYKNYGTTMAGLRAIGY+FD DEYH     RLPYDN
Subjt:  MEYDKCYRSSKAQIPNFDCLLFDLDDTLYPLSSGLATACKSNIHAYMAEKLGIENSKIPELSNLLYKNYGTTMAGLRAIGYDFDCDEYH-----RLPYDN

Query:  LKPDPILRNLLLSLPYRKLIFTNADKDHTAKVLNKLGLEDCFEGIICFETLNPTQKSPVLDEKEHPTNEIFDIIDHFSQPNPLMGLPITPIEAIPELGEV
        +KPD +LR+LLLSLP RK+IFTNAD+ H AK L KLGLEDCFEGIICFETLN    +   +      +EIFDI+ HF++  P+  LP TP+   P    +
Subjt:  LKPDPILRNLLLSLPYRKLIFTNADKDHTAKVLNKLGLEDCFEGIICFETLNPTQKSPVLDEKEHPTNEIFDIIDHFSQPNPLMGLPITPIEAIPELGEV

Query:  ELMKSELNYSANNNVAVETSV
        E      N   N  +  E SV
Subjt:  ELMKSELNYSANNNVAVETSV

AT5G02230.2 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein

2.6e-65

57.47

Show/hide

Query:  MEYDKCYRSSKAQIPNFDCLLFDLDDTLYPLSSGLATACKSNIHAYMAEKLGIENSKIPELSNLLYKNYGTTMAGLRAIGYDFDCDEYH-----RLPYDN
        ME++  Y  + +Q   +DCLLFDLDDTLYPLSSG+A  C +NI  YM EKLGI   KI ELS+LLYKNYGTTMAGLRAIGY+FD DEYH     RLPYDN
Subjt:  MEYDKCYRSSKAQIPNFDCLLFDLDDTLYPLSSGLATACKSNIHAYMAEKLGIENSKIPELSNLLYKNYGTTMAGLRAIGYDFDCDEYH-----RLPYDN

Query:  LKPDPILRNLLLSLPYRKLIFTNADKDHTAKVLNKLGLEDCFEGIICFETLNPTQKSPVLDEKEHPTNEIFDIIDHFSQPNPLMGLPITPIEAIPELGEV
        +KPD +LR+LLLSLP RK+IFTNAD+ H AK L KLGLEDCFEGIICFETLN    +   +      +EIFDI+ HF++  P+  LP TP+   P    +
Subjt:  LKPDPILRNLLLSLPYRKLIFTNADKDHTAKVLNKLGLEDCFEGIICFETLNPTQKSPVLDEKEHPTNEIFDIIDHFSQPNPLMGLPITPIEAIPELGEV

Query:  ELMKSELNYSANNNVAVETSV
        E      N   N  +  E SV
Subjt:  ELMKSELNYSANNNVAVETSV

AT5G59480.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein

5.2e-58

51.57

Show/hide

Query:  MEYDKCYRSSKAQIPNFDCLLFDLDDTLYPLSSGLATACKSNIHAYMAEKLGIENSKIPELSNLLYKNYGTTMAGLRAIGYDFDCDEYH-----RLPYDN
        M Y++ ++ +      +DCLLFD+DDTLYPLSSGLA   K NI  YM +KLGIE  K+ EL   LYK YGTTMAGL+A+GYDFD D++H     RLPY  
Subjt:  MEYDKCYRSSKAQIPNFDCLLFDLDDTLYPLSSGLATACKSNIHAYMAEKLGIENSKIPELSNLLYKNYGTTMAGLRAIGYDFDCDEYH-----RLPYDN

Query:  LKPDPILRNLLLSLPYRKLIFTNADKDHTAKVLNKLGLEDCFEGIICFETLNPTQK--SPVLDEKEHPTNEIFDIIDHFSQPNPLMGLPITPIEAIPELG
        LKPDPILRN++LSLP RK++FTNADK H AK++ +LGLE CFE II FETLNP  K  SPV    +  T EIFDII + + P+  + LP T +   P  G
Subjt:  LKPDPILRNLLLSLPYRKLIFTNADKDHTAKVLNKLGLEDCFEGIICFETLNPTQK--SPVLDEKEHPTNEIFDIIDHFSQPNPLMGLPITPIEAIPELG

Query:  EVELMKSELNYSANNNVAVETSV
          E +    N +    +  + S+
Subjt:  EVELMKSELNYSANNNVAVETSV

AT5G59480.2 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein

1.7e-56

51.57

Show/hide

Query:  MEYDKCYRSSKAQIPNFDCLLFDLDDTLYPLSSGLATACKSNIHAYMAEKLGIENSKIPELSNLLYKNYGTTMAGLRAIGYDFDCDEYH-----RLPYDN
        M Y++ ++ +      +DCLLFD+DDTLYPLSSGLA   K NI  YM +KLGIE  K+ EL   LYK YGTTMAGL+A+GYDFD D++H     RLPY  
Subjt:  MEYDKCYRSSKAQIPNFDCLLFDLDDTLYPLSSGLATACKSNIHAYMAEKLGIENSKIPELSNLLYKNYGTTMAGLRAIGYDFDCDEYH-----RLPYDN

Query:  LKPDPILRNLLLSLPYRKLIFTNADKDHTAKVLNKLGLEDCFEGIICFETLNPTQK--SPVLDEKEHPTNEIFDIIDHFSQPNPLMGLPITPIEAIPELG
        LKPDPILRN++LSLP RK +FTNADK H AK++ +LGLE CFE II FETLNP  K  SPV    +  T EIFDII + + P+  + LP T +   P  G
Subjt:  LKPDPILRNLLLSLPYRKLIFTNADKDHTAKVLNKLGLEDCFEGIICFETLNPTQK--SPVLDEKEHPTNEIFDIIDHFSQPNPLMGLPITPIEAIPELG

Query:  EVELMKSELNYSANNNVAVETSV
          E +    N +    +  + S+
Subjt:  EVELMKSELNYSANNNVAVETSV

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGAATATGATAAGTGTTACAGATCATCAAAGGCTCAAATTCCAAATTTTGATTGTCTTCTTTTTGATCTTGATGACACTCTATATCCATTAAGCTCTGGCTTAGCAAC
AGCTTGCAAAAGCAACATACATGCTTATATGGCTGAAAAGCTTGGGATAGAAAACAGCAAAATCCCAGAGTTGAGCAACTTACTTTACAAGAATTATGGAACAACAATGG
CTGGTCTCAGGGCCATTGGCTATGACTTTGACTGTGATGAATATCACAGATTGCCTTATGACAACTTGAAACCTGATCCCATTTTAAGAAATCTTCTGCTCAGCCTCCCT
TACAGGAAACTTATCTTTACCAATGCAGACAAAGATCACACTGCCAAAGTACTTAACAAACTTGGATTAGAAGACTGTTTTGAAGGCATTATATGCTTTGAAACCCTCAA
TCCCACACAAAAAAGCCCTGTTTTAGATGAAAAGGAGCATCCAACCAATGAAATCTTTGACATAATTGACCATTTCTCTCAACCAAATCCTCTAATGGGGTTGCCAATTA
CACCTATTGAAGCAATACCAGAGCTTGGTGAAGTTGAATTAATGAAATCAGAACTCAATTACTCAGCCAATAATAATGTAGCAGTGGAGACTTCTGTGACAGCT

mRNA sequence

Show/hide mRNA sequence

CTCTCTTTCTCCTCCCCCTTCTCCTTCTCTAAGCTCTTTAATTTCGTCTTCTCAAACCCCTCTCTTATATTTCCTCTCTCTCTCCTTTTTCCCCATTTTCTTAAGTGGGG
GAACATTTTCTCTCTCCTTTTACAGTTCATTACCACCAAGAAAAAAATAATAATGGAATATGATAAGTGTTACAGATCATCAAAGGCTCAAATTCCAAATTTTGATTGTC
TTCTTTTTGATCTTGATGACACTCTATATCCATTAAGCTCTGGCTTAGCAACAGCTTGCAAAAGCAACATACATGCTTATATGGCTGAAAAGCTTGGGATAGAAAACAGC
AAAATCCCAGAGTTGAGCAACTTACTTTACAAGAATTATGGAACAACAATGGCTGGTCTCAGGGCCATTGGCTATGACTTTGACTGTGATGAATATCACAGATTGCCTTA
TGACAACTTGAAACCTGATCCCATTTTAAGAAATCTTCTGCTCAGCCTCCCTTACAGGAAACTTATCTTTACCAATGCAGACAAAGATCACACTGCCAAAGTACTTAACA
AACTTGGATTAGAAGACTGTTTTGAAGGCATTATATGCTTTGAAACCCTCAATCCCACACAAAAAAGCCCTGTTTTAGATGAAAAGGAGCATCCAACCAATGAAATCTTT
GACATAATTGACCATTTCTCTCAACCAAATCCTCTAATGGGGTTGCCAATTACACCTATTGAAGCAATACCAGAGCTTGGTGAAGTTGAATTAATGAAATCAGAACTCAA
TTACTCAGCCAATAATAATGTAGCAGTGGAGACTTCTGTGACAGCT

Protein sequence

Show/hide protein sequence

MEYDKCYRSSKAQIPNFDCLLFDLDDTLYPLSSGLATACKSNIHAYMAEKLGIENSKIPELSNLLYKNYGTTMAGLRAIGYDFDCDEYHRLPYDNLKPDPILRNLLLSLP
YRKLIFTNADKDHTAKVLNKLGLEDCFEGIICFETLNPTQKSPVLDEKEHPTNEIFDIIDHFSQPNPLMGLPITPIEAIPELGEVELMKSELNYSANNNVAVETSVTA

Lsi01G014340 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome