CuGenDBv2

Gene ID	Lsi01G014440
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	Photosystem II CP47 reaction center protein
Genome location	chr01:12587082..12587714
RNA-Seq Expression	Lsi01G014440
Synteny	Lsi01G014440
Gene Ontology terms	GO:0009772 - photosynthetic electron transport in photosystem II (biological process) GO:0018298 - protein-chromophore linkage (biological process) GO:0009523 - photosystem II (cellular component) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0016168 - chlorophyll binding (molecular function) GO:0045156 - electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity (molecular function)
InterPro domains	IPR000932 - Photosystem antenna protein-like IPR036001 - Photosystem antenna protein-like superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

ALO21850.1 PsbB [Cucurbita argyrosperma subsp. sororia]

1.2e-122

98.56

Show/hide

Query:  MGLPWYRVHTVVLNDPGRLLSVHIMHTTLVAGWAGSMALYELVVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAH
        MGLPWYRVHTVVLNDPGRLLSVHIMHT LVAGWAGSMALYEL VFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAH
Subjt:  MGLPWYRVHTVVLNDPGRLLSVHIMHTTLVAGWAGSMALYELVVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAH

Query:  IVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAWGVEGFDPFVPGGIGS
        IVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAWGVEGFDPFVPGGI S
Subjt:  IVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAWGVEGFDPFVPGGIGS

Query:  HHIAAGTL
        HHIAAGTL
Subjt:  HHIAAGTL

YP_009674417.1 photosystem II 47 kDa protein [Siraitia grosvenorii]

1.2e-122

98.56

Show/hide

Query:  MGLPWYRVHTVVLNDPGRLLSVHIMHTTLVAGWAGSMALYELVVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAH
        MGLPWYRVHTVVLNDPGRLLSVHIMHT LVAGWAGSMALYEL VFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAH
Subjt:  MGLPWYRVHTVVLNDPGRLLSVHIMHTTLVAGWAGSMALYELVVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAH

Query:  IVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAWGVEGFDPFVPGGIGS
        IVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAWGVEGFDPFVPGGI S
Subjt:  IVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAWGVEGFDPFVPGGIGS

Query:  HHIAAGTL
        HHIAAGTL
Subjt:  HHIAAGTL

YP_009751764.1 photosystem II 47 kDa protein [Herpetospermum pedunculosum]

1.2e-122

98.56

Show/hide

Query:  MGLPWYRVHTVVLNDPGRLLSVHIMHTTLVAGWAGSMALYELVVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAH
        MGLPWYRVHTVVLNDPGRLLSVHIMHT LVAGWAGSMALYEL VFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAH
Subjt:  MGLPWYRVHTVVLNDPGRLLSVHIMHTTLVAGWAGSMALYELVVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAH

Query:  IVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAWGVEGFDPFVPGGIGS
        IVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAWGVEGFDPFVPGGI S
Subjt:  IVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAWGVEGFDPFVPGGIGS

Query:  HHIAAGTL
        HHIAAGTL
Subjt:  HHIAAGTL

YP_009752522.1 photosystem II 47 kDa protein [Trichosanthes tubiflora]

1.2e-122

98.56

Show/hide

Query:  MGLPWYRVHTVVLNDPGRLLSVHIMHTTLVAGWAGSMALYELVVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAH
        MGLPWYRVHTVVLNDPGRLLSVHIMHT LVAGWAGSMALYEL VFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAH
Subjt:  MGLPWYRVHTVVLNDPGRLLSVHIMHTTLVAGWAGSMALYELVVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAH

Query:  IVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAWGVEGFDPFVPGGIGS
        IVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAWGVEGFDPFVPGGI S
Subjt:  IVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAWGVEGFDPFVPGGIGS

Query:  HHIAAGTL
        HHIAAGTL
Subjt:  HHIAAGTL

YP_009752607.1 photosystem II 47 kDa protein [Trichosanthes homophylla]

1.2e-122

98.56

Show/hide

Query:  MGLPWYRVHTVVLNDPGRLLSVHIMHTTLVAGWAGSMALYELVVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAH
        MGLPWYRVHTVVLNDPGRLLSVHIMHT LVAGWAGSMALYEL VFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAH
Subjt:  MGLPWYRVHTVVLNDPGRLLSVHIMHTTLVAGWAGSMALYELVVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAH

Query:  IVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAWGVEGFDPFVPGGIGS
        IVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAWGVEGFDPFVPGGI S
Subjt:  IVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAWGVEGFDPFVPGGIGS

Query:  HHIAAGTL
        HHIAAGTL
Subjt:  HHIAAGTL

TrEMBL top hits

e value

%identity

Alignment

A0A1P8LE33 Photosystem II CP47 reaction center protein

5.8e-123

98.56

Show/hide

Query:  MGLPWYRVHTVVLNDPGRLLSVHIMHTTLVAGWAGSMALYELVVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAH
        MGLPWYRVHTVVLNDPGRLLSVHIMHT LVAGWAGSMALYEL VFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAH
Subjt:  MGLPWYRVHTVVLNDPGRLLSVHIMHTTLVAGWAGSMALYELVVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAH

Query:  IVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAWGVEGFDPFVPGGIGS
        IVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAWGVEGFDPFVPGGI S
Subjt:  IVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAWGVEGFDPFVPGGIGS

Query:  HHIAAGTL
        HHIAAGTL
Subjt:  HHIAAGTL

A0A1S4EU40 Photosystem II CP47 reaction center protein

5.8e-123

98.56

Show/hide

Query:  MGLPWYRVHTVVLNDPGRLLSVHIMHTTLVAGWAGSMALYELVVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAH
        MGLPWYRVHTVVLNDPGRLLSVHIMHT LVAGWAGSMALYEL VFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAH
Subjt:  MGLPWYRVHTVVLNDPGRLLSVHIMHTTLVAGWAGSMALYELVVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAH

Query:  IVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAWGVEGFDPFVPGGIGS
        IVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAWGVEGFDPFVPGGI S
Subjt:  IVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAWGVEGFDPFVPGGIGS

Query:  HHIAAGTL
        HHIAAGTL
Subjt:  HHIAAGTL

A0A249RZY7 Photosystem II CP47 reaction center protein

5.8e-123

98.56

Show/hide

Query:  MGLPWYRVHTVVLNDPGRLLSVHIMHTTLVAGWAGSMALYELVVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAH
        MGLPWYRVHTVVLNDPGRLLSVHIMHT LVAGWAGSMALYEL VFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAH
Subjt:  MGLPWYRVHTVVLNDPGRLLSVHIMHTTLVAGWAGSMALYELVVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAH

Query:  IVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAWGVEGFDPFVPGGIGS
        IVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAWGVEGFDPFVPGGI S
Subjt:  IVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAWGVEGFDPFVPGGIGS

Query:  HHIAAGTL
        HHIAAGTL
Subjt:  HHIAAGTL

A0A6H0ERV3 Photosystem II CP47 reaction center protein

5.8e-123

98.56

Show/hide

Query:  MGLPWYRVHTVVLNDPGRLLSVHIMHTTLVAGWAGSMALYELVVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAH
        MGLPWYRVHTVVLNDPGRLLSVHIMHT LVAGWAGSMALYEL VFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAH
Subjt:  MGLPWYRVHTVVLNDPGRLLSVHIMHTTLVAGWAGSMALYELVVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAH

Query:  IVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAWGVEGFDPFVPGGIGS
        IVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAWGVEGFDPFVPGGI S
Subjt:  IVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAWGVEGFDPFVPGGIGS

Query:  HHIAAGTL
        HHIAAGTL
Subjt:  HHIAAGTL

G3ETS3 Photosystem II CP47 reaction center protein

5.8e-123

98.56

Show/hide

Query:  MGLPWYRVHTVVLNDPGRLLSVHIMHTTLVAGWAGSMALYELVVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAH
        MGLPWYRVHTVVLNDPGRLLSVHIMHT LVAGWAGSMALYEL VFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAH
Subjt:  MGLPWYRVHTVVLNDPGRLLSVHIMHTTLVAGWAGSMALYELVVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAH

Query:  IVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAWGVEGFDPFVPGGIGS
        IVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAWGVEGFDPFVPGGI S
Subjt:  IVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAWGVEGFDPFVPGGIGS

Query:  HHIAAGTL
        HHIAAGTL
Subjt:  HHIAAGTL

SwissProt top hits

e value

%identity

Alignment

A7Y3H4 Photosystem II CP47 reaction center protein

8.7e-124

96.63

Show/hide

Query:  MGLPWYRVHTVVLNDPGRLLSVHIMHTTLVAGWAGSMALYELVVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAH
        MGLPWYRVHTVVLNDPGRLLSVHIMHT LVAGWAGSMALYEL VFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGT+TNPGIWSYEGVAGAH
Subjt:  MGLPWYRVHTVVLNDPGRLLSVHIMHTTLVAGWAGSMALYELVVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAH

Query:  IVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAWGVEGFDPFVPGGIGS
        IVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLFLSGL CFGFGAFHVTGLYGPGIWVSDPYGLTG+VQ VNPAWGVEGFDPFVPGGI S
Subjt:  IVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAWGVEGFDPFVPGGIGS

Query:  HHIAAGTL
        HHIAAGTL
Subjt:  HHIAAGTL

Q09WZ1 Photosystem II CP47 reaction center protein

3.0e-124

97.12

Show/hide

Query:  MGLPWYRVHTVVLNDPGRLLSVHIMHTTLVAGWAGSMALYELVVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAH
        MGLPWYRVHTVVLNDPGRL+SVHIMHT LVAGWAGSMALYEL VFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAH
Subjt:  MGLPWYRVHTVVLNDPGRLLSVHIMHTTLVAGWAGSMALYELVVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAH

Query:  IVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAWGVEGFDPFVPGGIGS
        IVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLFLSG+ CFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAWGVEGFDPFVPGGI S
Subjt:  IVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAWGVEGFDPFVPGGIGS

Query:  HHIAAGTL
        HHIAAGTL
Subjt:  HHIAAGTL

Q0ZIZ3 Photosystem II CP47 reaction center protein

6.6e-124

96.63

Show/hide

Query:  MGLPWYRVHTVVLNDPGRLLSVHIMHTTLVAGWAGSMALYELVVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAH
        MGLPWYRVHTVVLNDPGRL+SVHIMHT LVAGWAGSMALYEL VFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAH
Subjt:  MGLPWYRVHTVVLNDPGRLLSVHIMHTTLVAGWAGSMALYELVVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAH

Query:  IVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAWGVEGFDPFVPGGIGS
        IVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLFLSGL CFGFGAFHVTGLYGPGIWVSDPYGLTG+VQ+VNPAWGVEGFDPFVPGGI S
Subjt:  IVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAWGVEGFDPFVPGGIGS

Query:  HHIAAGTL
        HHIAAGTL
Subjt:  HHIAAGTL

Q2QD63 Photosystem II CP47 reaction center protein

5.1e-124

97.6

Show/hide

Query:  MGLPWYRVHTVVLNDPGRLLSVHIMHTTLVAGWAGSMALYELVVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAH
        MGLPWYRVHTVVLNDPGRLLSVHIMHT LVAGWAGSMALYEL VFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAH
Subjt:  MGLPWYRVHTVVLNDPGRLLSVHIMHTTLVAGWAGSMALYELVVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAH

Query:  IVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAWGVEGFDPFVPGGIGS
        I+FSGLCFLAAIWHWVYWDLEIF DERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAWGVEGFDPFVPGGI S
Subjt:  IVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAWGVEGFDPFVPGGIGS

Query:  HHIAAGTL
        HHIAAGTL
Subjt:  HHIAAGTL

Q49KX2 Photosystem II CP47 reaction center protein

1.5e-123

96.63

Show/hide

Query:  MGLPWYRVHTVVLNDPGRLLSVHIMHTTLVAGWAGSMALYELVVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAH
        MGLPWYRVHTVVLNDPGRLLSVHIMHT LVAGWAGSMALYEL VFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAH
Subjt:  MGLPWYRVHTVVLNDPGRLLSVHIMHTTLVAGWAGSMALYELVVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAH

Query:  IVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAWGVEGFDPFVPGGIGS
        IVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLFLSG+ CFGFGAFHVTGLYGPGIWVSDPYGLTG+VQ VNPAWGVEGFDPFVPGGI S
Subjt:  IVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAWGVEGFDPFVPGGIGS

Query:  HHIAAGTL
        HHIAAGTL
Subjt:  HHIAAGTL

Arabidopsis top hits

e value

%identity

Alignment

ATCG00680.1 photosystem II reaction center protein B

8.9e-124

95.19

Show/hide

Query:  MGLPWYRVHTVVLNDPGRLLSVHIMHTTLVAGWAGSMALYELVVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAH
        MGLPWYRVHTVVLNDPGRLL+VHIMHT LVAGWAGSMALYEL VFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGW+ITGGTITNPG+WSYEGVAGAH
Subjt:  MGLPWYRVHTVVLNDPGRLLSVHIMHTTLVAGWAGSMALYELVVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAH

Query:  IVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAWGVEGFDPFVPGGIGS
        IVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLFLSG+ CFGFGAFHVTGLYGPGIWVSDPYGLTG+VQ VNPAWGVEGFDPFVPGGI S
Subjt:  IVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAWGVEGFDPFVPGGIGS

Query:  HHIAAGTL
        HHIAAGTL
Subjt:  HHIAAGTL

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGGTTTGCCTTGGTATCGTGTTCATACCGTTGTATTGAATGATCCCGGTCGTTTGCTTTCTGTTCATATAATGCATACAACTCTAGTTGCTGGTTGGGCCGGTTCAAT
GGCCCTATACGAATTAGTTGTTTTTGATCCCTCTGATCCTGTTCTTGATCCAATGTGGAGACAAGGTATGTTCGTTATACCCTTCATGACTCGTTTAGGAATAACCAATT
CATGGGGGGGTTGGAGTATCACAGGAGGGACTATAACGAATCCGGGTATTTGGAGTTACGAAGGTGTGGCCGGAGCACATATTGTGTTTTCTGGATTGTGCTTCTTAGCA
GCTATCTGGCATTGGGTGTATTGGGATCTAGAAATATTTTGTGATGAACGTACAGGAAAACCTTCTTTGGATTTGCCGAAGATTTTTGGAATTCATTTATTTCTCTCAGG
GTTGGGTTGCTTTGGTTTTGGTGCATTTCATGTAACCGGATTGTATGGTCCGGGAATATGGGTATCCGATCCTTATGGATTAACCGGAAGGGTACAAGCTGTAAATCCTG
CGTGGGGTGTCGAAGGGTTTGATCCTTTTGTTCCGGGCGGAATAGGCTCGCATCATATTGCAGCAGGTACATTGGATACCTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MGLPWYRVHTVVLNDPGRLLSVHIMHTTLVAGWAGSMALYELVVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLA
AIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAWGVEGFDPFVPGGIGSHHIAAGTLDT

Lsi01G014440 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome