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Lsi01G014500 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G014500
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionultraviolet-B receptor UVR8-like
Genome locationchr01:12644066..12644489
RNA-Seq ExpressionLsi01G014500
SyntenyLsi01G014500
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032676.1 ultraviolet-B receptor UVR8-like [Cucumis melo var. makuwa]6.7e-3397.22Show/hide
Query:  MKEENAGDQNGAKMANKIDALVYMWGYLPGALPDKSLLLSPEPVRLPGSIDGGDSWKEVCGGGCGFAMAISG
        MKEENA DQNGAKMANKIDALVYMWGYLPGALPDKSLLLSPEPVRLPGS DGGDSWKEVCGGGCGFAMAISG
Subjt:  MKEENAGDQNGAKMANKIDALVYMWGYLPGALPDKSLLLSPEPVRLPGSIDGGDSWKEVCGGGCGFAMAISG
XP_008448203.1 PREDICTED: ultraviolet-B receptor UVR8-like [Cucumis melo]6.7e-3389.87Show/hide
Query:  MKEENAGDQNGAKMANKIDALVYMWGYLPGALPDKSLLLSPEPVRLPGSIDGGDSWKEVCGGGCGFAMAISGLKALDLW
        MKEENA DQNGAKMANKIDALVYMWGYLPGALPDKSLLLSPEPVRLPGS DGGDSWKEVCGGGCGFAMAIS    L  W
Subjt:  MKEENAGDQNGAKMANKIDALVYMWGYLPGALPDKSLLLSPEPVRLPGSIDGGDSWKEVCGGGCGFAMAISGLKALDLW
XP_011653650.2 ultraviolet-B receptor UVR8 isoform X4 [Cucumis sativus]1.6e-3187.34Show/hide
Query:  MKEENAGDQNGAKMANKIDALVYMWGYLPGALPDKSLLLSPEPVRLPGSIDGGDSWKEVCGGGCGFAMAISGLKALDLW
        MKEENA D NGAKMANKIDALVYMWGYLPGALPDKSLLL PEPVRLP SIDGGDSWKEVCGGGCGFAMAIS    L  W
Subjt:  MKEENAGDQNGAKMANKIDALVYMWGYLPGALPDKSLLLSPEPVRLPGSIDGGDSWKEVCGGGCGFAMAISGLKALDLW
XP_038883528.1 ultraviolet-B receptor UVR8-like isoform X1 [Benincasa hispida]8.7e-3391.25Show/hide
Query:  MKEENA-GDQNGAKMANKIDALVYMWGYLPGALPDKSLLLSPEPVRLPGSIDGGDSWKEVCGGGCGFAMAISGLKALDLW
        MKEENA GDQNGAKMANKIDALVYMWGYLPGALPDKSLLLSPEPVRLPGSIDGGDSWKEVCGGGCGFAMAIS    L  W
Subjt:  MKEENA-GDQNGAKMANKIDALVYMWGYLPGALPDKSLLLSPEPVRLPGSIDGGDSWKEVCGGGCGFAMAISGLKALDLW
XP_038883529.1 ultraviolet-B receptor UVR8-like isoform X2 [Benincasa hispida]8.7e-3391.25Show/hide
Query:  MKEENA-GDQNGAKMANKIDALVYMWGYLPGALPDKSLLLSPEPVRLPGSIDGGDSWKEVCGGGCGFAMAISGLKALDLW
        MKEENA GDQNGAKMANKIDALVYMWGYLPGALPDKSLLLSPEPVRLPGSIDGGDSWKEVCGGGCGFAMAIS    L  W
Subjt:  MKEENA-GDQNGAKMANKIDALVYMWGYLPGALPDKSLLLSPEPVRLPGSIDGGDSWKEVCGGGCGFAMAISGLKALDLW
TrEMBL top hitse value%identityAlignment
A0A1S3BIK1 ultraviolet-B receptor UVR8-like3.2e-3389.87Show/hide
Query:  MKEENAGDQNGAKMANKIDALVYMWGYLPGALPDKSLLLSPEPVRLPGSIDGGDSWKEVCGGGCGFAMAISGLKALDLW
        MKEENA DQNGAKMANKIDALVYMWGYLPGALPDKSLLLSPEPVRLPGS DGGDSWKEVCGGGCGFAMAIS    L  W
Subjt:  MKEENAGDQNGAKMANKIDALVYMWGYLPGALPDKSLLLSPEPVRLPGSIDGGDSWKEVCGGGCGFAMAISGLKALDLW
A0A5A7SRK3 Ultraviolet-B receptor UVR8-like3.2e-3397.22Show/hide
Query:  MKEENAGDQNGAKMANKIDALVYMWGYLPGALPDKSLLLSPEPVRLPGSIDGGDSWKEVCGGGCGFAMAISG
        MKEENA DQNGAKMANKIDALVYMWGYLPGALPDKSLLLSPEPVRLPGS DGGDSWKEVCGGGCGFAMAISG
Subjt:  MKEENAGDQNGAKMANKIDALVYMWGYLPGALPDKSLLLSPEPVRLPGSIDGGDSWKEVCGGGCGFAMAISG
A0A6J1CRW6 ultraviolet-B receptor UVR8-like isoform X13.4e-3083.54Show/hide
Query:  MKEENAGDQNGAKMANKIDALVYMWGYLPGALPDKSLLLSPEPVRLPGSIDGGDSWKEVCGGGCGFAMAISGLKALDLW
        MKEENAG +NGAKMA K DA VYMWGYLPGAL DKSL+LSPEPVRLPGSIDGGDSWKEVCGGGCGFAMAIS    L  W
Subjt:  MKEENAGDQNGAKMANKIDALVYMWGYLPGALPDKSLLLSPEPVRLPGSIDGGDSWKEVCGGGCGFAMAISGLKALDLW
A0A6J1GDP4 ultraviolet-B receptor UVR8-like1.8e-3187.34Show/hide
Query:  MKEENAGDQNGAKMANKIDALVYMWGYLPGALPDKSLLLSPEPVRLPGSIDGGDSWKEVCGGGCGFAMAISGLKALDLW
        MKEENA  QN AKMANKIDALV+MWGYLPGALPDKSLLLSPEPVRLPGSIDGGDSWKEVCGGGCGFAMAIS    L  W
Subjt:  MKEENAGDQNGAKMANKIDALVYMWGYLPGALPDKSLLLSPEPVRLPGSIDGGDSWKEVCGGGCGFAMAISGLKALDLW
A0A6J1IKD3 ultraviolet-B receptor UVR8-like8.8e-3186.08Show/hide
Query:  MKEENAGDQNGAKMANKIDALVYMWGYLPGALPDKSLLLSPEPVRLPGSIDGGDSWKEVCGGGCGFAMAISGLKALDLW
        MKEENA  QN AKMANKIDALV+MWGYLPGALPDKSLLLSPEPVRLPGSIDGGD WKEVCGGGCGFAMAIS    L  W
Subjt:  MKEENAGDQNGAKMANKIDALVYMWGYLPGALPDKSLLLSPEPVRLPGSIDGGDSWKEVCGGGCGFAMAISGLKALDLW
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G53830.1 Regulator of chromosome condensation (RCC1) family protein3.2e-1766.1Show/hide
Query:  LVYMWGYLPGALPDKSLLLSPEPVRLPGSIDGGDSWKEVCGGGCGFAMAISGLKALDLW
        +VYM GYLPGA  +KS +LSP PVRL  ++ GGDSWK+VCGGGCGFAMAIS    L  W
Subjt:  LVYMWGYLPGALPDKSLLLSPEPVRLPGSIDGGDSWKEVCGGGCGFAMAISGLKALDLW
AT3G55580.1 Regulator of chromosome condensation (RCC1) family protein3.7e-1354.24Show/hide
Query:  LVYMWGYLPGALPDKSLLLSPEPVRLPGSIDGGDSWKEVCGGGCGFAMAISGLKALDLW
        +VYMWGYLPGA P +S L+SP  V++P +++   SWK+V GGGCGFAMA +    L  W
Subjt:  LVYMWGYLPGALPDKSLLLSPEPVRLPGSIDGGDSWKEVCGGGCGFAMAISGLKALDLW

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGAGGAGAATGCAGGAGATCAGAACGGTGCAAAAATGGCGAACAAAATCGATGCTCTCGTTTATATGTGGGGTTATCTTCCTGGAGCCTTGCCGGATAAATCCCT
TTTGCTCTCGCCGGAGCCGGTACGCCTTCCGGGTTCGATCGACGGTGGGGATTCGTGGAAGGAGGTCTGTGGCGGCGGTTGTGGATTCGCTATGGCCATTTCAGGTCTTA
AAGCTCTCGATCTTTGGAATCTTGTTTGTTCTTTTGTTGTTTTCTTGAATTTTGGTCGATGA
mRNA sequenceShow/hide mRNA sequence
GGTTGAATTTCCATATGCAGAAGCATCGGAAACAGAGAGAGAAAGATGAAGGAGGAGAATGCAGGAGATCAGAACGGTGCAAAAATGGCGAACAAAATCGATGCTCTCGT
TTATATGTGGGGTTATCTTCCTGGAGCCTTGCCGGATAAATCCCTTTTGCTCTCGCCGGAGCCGGTACGCCTTCCGGGTTCGATCGACGGTGGGGATTCGTGGAAGGAGG
TCTGTGGCGGCGGTTGTGGATTCGCTATGGCCATTTCAGGTCTTAAAGCTCTCGATCTTTGGAATCTTGTTTGTTCTTTTGTTGTTTTCTTGAATTTTGGTCGATGA
Protein sequenceShow/hide protein sequence
MKEENAGDQNGAKMANKIDALVYMWGYLPGALPDKSLLLSPEPVRLPGSIDGGDSWKEVCGGGCGFAMAISGLKALDLWNLVCSFVVFLNFGR