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Lsi01G014580 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G014580
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionEarly nodulin-75-like
Genome locationchr01:12702333..12703302
RNA-Seq ExpressionLsi01G014580
SyntenyLsi01G014580
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045171.1 early nodulin-75-like [Cucumis melo var. makuwa]5.3e-1762.04Show/hide
Query:  MNNPYYSYYSYGYPYPHQGYPKY--QAVP---SYYGGYTTTYHGQLHPYPY--QGYPYPVATTNLPPPYNYYQQNNGTN-TGGILASMLSSVTGNIG-AS
        MNNP Y  YSYGYPYPHQGYPKY  Q VP    Y  GY    HG +HPYP     YPYP  +T L PP   YQQN GTN T GIL SMLSSV+GN   AS
Subjt:  MNNPYYSYYSYGYPYPHQGYPKY--QAVP---SYYGGYTTTYHGQLHPYPY--QGYPYPVATTNLPPPYNYYQQNNGTN-TGGILASMLSSVTGNIG-AS

Query:  LISSLFFN
         ISSLFF+
Subjt:  LISSLFFN

KAE8649545.1 hypothetical protein Csa_017919 [Cucumis sativus]6.9e-1761Show/hide
Query:  MNNPYYSYYSYGYPYPHQGYPKY--QAVP---SYYGGYTTTYHGQLHPYP-------YQGYPYPVATTNLPPPYNYYQQNNGTN-TGGILASMLSSVTGN
        MNNP Y +YSYGYPYPHQGYPKY  Q VP   +Y  GYT   HG +HPY        YQ YPYP  +T L PP   YQQN  TN  GGILASMLSSV+GN
Subjt:  MNNPYYSYYSYGYPYPHQGYPKY--QAVP---SYYGGYTTTYHGQLHPYP-------YQGYPYPVATTNLPPPYNYYQQNNGTN-TGGILASMLSSVTGN

XP_008450016.1 PREDICTED: early nodulin-75-like [Cucumis melo]2.6e-0843.07Show/hide
Query:  MNNPYYSYYSYGYPYPH-QGYPKYQAV--PSYYGGYTTTY-HGQLHPYP---YQGYP-YPVATTNLPPPY--------NYYQQNNGTNTG----------
        MNNP Y YYS+GYPYPH + YPKY+A   P    GYT+ + +   +PYP   YQGYP Y   TT  PPP+        +YY   +    G          
Subjt:  MNNPYYSYYSYGYPYPH-QGYPKYQAV--PSYYGGYTTTY-HGQLHPYP---YQGYP-YPVATTNLPPPY--------NYYQQNNGTNTG----------

Query:  ------------GILASMLSSVTGNIGASLISSLFFN
                    G L SMLSSV G+IGAS IS LFFN
Subjt:  ------------GILASMLSSVTGNIGASLISSLFFN

TrEMBL top hitse value%identityAlignment
A0A0A0KZN9 Uncharacterized protein1.6e-1961.06Show/hide
Query:  MNNPYYSYYSYGYPYPHQGYPKY--QAVP---SYYGGYTTTYHGQLHPYP-------YQGYPYPVATTNLPPPYNYYQQNNGTN-TGGILASMLSSVTGN
        MNNP Y +YSYGYPYPHQGYPKY  Q VP   +Y  GYT   HG +HPY        YQ YPYP  +T L PP   YQQN  TN  GGILASMLSSV+GN
Subjt:  MNNPYYSYYSYGYPYPHQGYPKY--QAVP---SYYGGYTTTYHGQLHPYP-------YQGYPYPVATTNLPPPYNYYQQNNGTN-TGGILASMLSSVTGN

Query:  IG-ASLISSLFFN
           AS +SSLFFN
Subjt:  IG-ASLISSLFFN

A0A1S3BP00 early nodulin-75-like1.3e-0843.07Show/hide
Query:  MNNPYYSYYSYGYPYPH-QGYPKYQAV--PSYYGGYTTTY-HGQLHPYP---YQGYP-YPVATTNLPPPY--------NYYQQNNGTNTG----------
        MNNP Y YYS+GYPYPH + YPKY+A   P    GYT+ + +   +PYP   YQGYP Y   TT  PPP+        +YY   +    G          
Subjt:  MNNPYYSYYSYGYPYPH-QGYPKYQAV--PSYYGGYTTTY-HGQLHPYP---YQGYP-YPVATTNLPPPY--------NYYQQNNGTNTG----------

Query:  ------------GILASMLSSVTGNIGASLISSLFFN
                    G L SMLSSV G+IGAS IS LFFN
Subjt:  ------------GILASMLSSVTGNIGASLISSLFFN

A0A5A7TUG4 Early nodulin-75-like1.3e-0843.07Show/hide
Query:  MNNPYYSYYSYGYPYPH-QGYPKYQAV--PSYYGGYTTTY-HGQLHPYP---YQGYP-YPVATTNLPPPY--------NYYQQNNGTNTG----------
        MNNP Y YYS+GYPYPH + YPKY+A   P    GYT+ + +   +PYP   YQGYP Y   TT  PPP+        +YY   +    G          
Subjt:  MNNPYYSYYSYGYPYPH-QGYPKYQAV--PSYYGGYTTTY-HGQLHPYP---YQGYP-YPVATTNLPPPY--------NYYQQNNGTNTG----------

Query:  ------------GILASMLSSVTGNIGASLISSLFFN
                    G L SMLSSV G+IGAS IS LFFN
Subjt:  ------------GILASMLSSVTGNIGASLISSLFFN

A0A5A7TUH5 Early nodulin-75-like2.6e-1762.04Show/hide
Query:  MNNPYYSYYSYGYPYPHQGYPKY--QAVP---SYYGGYTTTYHGQLHPYPY--QGYPYPVATTNLPPPYNYYQQNNGTN-TGGILASMLSSVTGNIG-AS
        MNNP Y  YSYGYPYPHQGYPKY  Q VP    Y  GY    HG +HPYP     YPYP  +T L PP   YQQN GTN T GIL SMLSSV+GN   AS
Subjt:  MNNPYYSYYSYGYPYPHQGYPKY--QAVP---SYYGGYTTTYHGQLHPYPY--QGYPYPVATTNLPPPYNYYQQNNGTN-TGGILASMLSSVTGNIG-AS

Query:  LISSLFFN
         ISSLFF+
Subjt:  LISSLFFN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGCTGCAGGGGTCTGATATTCATGTATACAAAACCCTAAGCCTACCATCTCTTTGCTCTGTGGCAGTCCGAAACATGAATAATCCATATTATTCTTATTACAGCTA
TGGATATCCTTATCCTCATCAAGGATATCCCAAGTACCAAGCTGTTCCTTCTTATTATGGTGGATACACTACTACTTATCATGGACAATTGCATCCTTATCCTTATCAAG
GATATCCTTATCCTGTAGCGACAACAAATCTTCCTCCTCCATATAATTATTATCAGCAAAACAATGGGACAAACACAGGGGGGATTTTGGCCTCCATGCTTTCGTCTGTC
ACTGGGAATATTGGTGCTTCTTTAATCTCTTCCCTTTTCTTTAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGGCTGCAGGGGTCTGATATTCATGTATACAAAACCCTAAGCCTACCATCTCTTTGCTCTGTGGCAGTCCGAAACATGAATAATCCATATTATTCTTATTACAGCTA
TGGATATCCTTATCCTCATCAAGGATATCCCAAGTACCAAGCTGTTCCTTCTTATTATGGTGGATACACTACTACTTATCATGGACAATTGCATCCTTATCCTTATCAAG
GATATCCTTATCCTGTAGCGACAACAAATCTTCCTCCTCCATATAATTATTATCAGCAAAACAATGGGACAAACACAGGGGGGATTTTGGCCTCCATGCTTTCGTCTGTC
ACTGGGAATATTGGTGCTTCTTTAATCTCTTCCCTTTTCTTTAACTAA
Protein sequenceShow/hide protein sequence
MRLQGSDIHVYKTLSLPSLCSVAVRNMNNPYYSYYSYGYPYPHQGYPKYQAVPSYYGGYTTTYHGQLHPYPYQGYPYPVATTNLPPPYNYYQQNNGTNTGGILASMLSSV
TGNIGASLISSLFFN