; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi01G014660 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G014660
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionglycine-rich protein 23-like
Genome locationchr01:12759020..12760680
RNA-Seq ExpressionLsi01G014660
SyntenyLsi01G014660
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595345.1 hypothetical protein SDJN03_11898, partial [Cucurbita argyrosperma subsp. sororia]3.2e-3759.51Show/hide
Query:  MVRTAYIVSPILGVLIISVVITLLCLFRRRKVSKEKGKSARESGSYVEGGNRSIGIVVDDGSNNMTTTGSNMFSGSYGGWGWDWTFSNIGDT----GNSG
        MVRTAYIV PI+G  IIS V+ L CL  RR+VSK      R+SGSYVEGGNR IGIVVDDGS   TT    MF+G YGGWGWDWTFS++GDT    GN G
Subjt:  MVRTAYIVSPILGVLIISVVITLLCLFRRRKVSKEKGKSARESGSYVEGGNRSIGIVVDDGSNNMTTTGSNMFSGSYGGWGWDWTFSNIGDT----GNSG

Query:  GGCDVEEGGGDGDGGGVGCYGGNSEVVGGENNGGLTGGISDNRGGGGGDGSGASFHEAGGGGVSSCDGGGGDGDGGGGVSDHGGGVSSHVDGGGSSFGGG
        GGCDV  GGGD + GG G     S++           G  D  G G GDG+GASFHEAGGGG          G GGG VSDHGGG S H+DGG S+FGGG
Subjt:  GGCDVEEGGGDGDGGGVGCYGGNSEVVGGENNGGLTGGISDNRGGGGGDGSGASFHEAGGGGVSSCDGGGGDGDGGGGVSDHGGGVSSHVDGGGSSFGGG

Query:  GASSYDGGG--HYDHGGGGGGGGGFSDYGGGGGGGGFDFGGGGGSSF
         +S   GGG   YDH    GGGGG SDY  GGGGGG+DFGG GGSSF
Subjt:  GASSYDGGG--HYDHGGGGGGGGGFSDYGGGGGGGGFDFGGGGGSSF

XP_022931867.1 glycine-rich protein 23-like [Cucurbita moschata]1.3e-3558.7Show/hide
Query:  MVRTAYIVSPILGVLIISVVITLLCLFRRRKVSKEKGKSARESGSYVEGGNRSIGIVVDDGSNNMTTTGSNMFSGSYGGWGWDWTFSNIGDT----GNSG
        MVRTAYIV PI+G  II  V+ L CL  RR+VSK      R+SGSYVEGGNR IGIVVDDGS   TT    MF+G YGGWGWDWTFS++GDT    GN G
Subjt:  MVRTAYIVSPILGVLIISVVITLLCLFRRRKVSKEKGKSARESGSYVEGGNRSIGIVVDDGSNNMTTTGSNMFSGSYGGWGWDWTFSNIGDT----GNSG

Query:  GGCDVEEGGGDGDGGGVGCYGGNSEVVGGENNGGLTGGISDNRGGGGGDGSGASFHEAGGGGVSSCDGGGGDGDGGGGVSDHGGGVSSHVDGGGSSFGGG
        GGCDV  GGGD + GG G     S++           G  D  G G GDG+GASFHEAGGG           G GGG VSD GGG S H+DGG S+FGGG
Subjt:  GGCDVEEGGGDGDGGGVGCYGGNSEVVGGENNGGLTGGISDNRGGGGGDGSGASFHEAGGGGVSSCDGGGGDGDGGGGVSDHGGGVSSHVDGGGSSFGGG

Query:  GASSYDGGG--HYDHGGGGGGGGGFSDYGGGGGGGGFDFGGGGGSSF
         +S   GGG   YDH    GGGGG SDY  GGGGGG+DFGGGGGSSF
Subjt:  GASSYDGGG--HYDHGGGGGGGGGFSDYGGGGGGGGFDFGGGGGSSF

XP_022966633.1 loricrin-like [Cucurbita maxima]9.0e-3260.17Show/hide
Query:  LLCLFRRRKVSKEKGKSARESGSYVEGGNRSIGIVVDDGSNNMTTTGSNMFSGSYGGWGWDWTFSNIGDT--GNSGGGCDVEEGGGDGDGGGVGCYGGNS
        L CL  RR+VSK      R+SGSYVEGGNR IGIVVDDGS   TT    MF+G YGGWGWDWTFS++GDT  GN GGGCDV  GGGD + GG G     S
Subjt:  LLCLFRRRKVSKEKGKSARESGSYVEGGNRSIGIVVDDGSNNMTTTGSNMFSGSYGGWGWDWTFSNIGDT--GNSGGGCDVEEGGGDGDGGGVGCYGGNS

Query:  EVVGGENNGGLTGGISDNRGGGGGDGSGASFHEAGGGGVSSCDGGGGDGDGGGGVSDHGGGVSSHVDGGGSSFGGGGASSYDGGG---HYDHGGGG----
        +V           G  D  G G GDG+GASFHEAGGG           G GGG VSDHGGG S H+DGG S+F GGGASS+ GGG    +DHGGGG    
Subjt:  EVVGGENNGGLTGGISDNRGGGGGDGSGASFHEAGGGGVSSCDGGGGDGDGGGGVSDHGGGVSSHVDGGGSSFGGGGASSYDGGG---HYDHGGGG----

Query:  ---GGGGGFSDYGGGGGGGGFDFGGGGGSSF
           GGGGG SDY  GGGGGGFDFGGGGGSSF
Subjt:  ---GGGGGFSDYGGGGGGGGFDFGGGGGSSF

XP_023518097.1 glycine-rich protein 5-like [Cucurbita pepo subsp. pepo]5.4e-2956.9Show/hide
Query:  LLCLFRRRKVSKEKGKSARESGSYVEGGNRSIGIVVDDGSNNMTTTGSNMFSGSYGGWGWDWTFSNIGDTGNSG----GGCDVEEGGGDGDGGGVGCYGG
        L CL  RR+VSK  G   R+SGS VEGGNR +GIVVDDGS   TT    MF+G YGGWGWDWTFS++GD+GN      GGCDV  GGGD + GG GC  G
Subjt:  LLCLFRRRKVSKEKGKSARESGSYVEGGNRSIGIVVDDGSNNMTTTGSNMFSGSYGGWGWDWTFSNIGDTGNSG----GGCDVEEGGGDGDGGGVGCYGG

Query:  NSEVVGGENNGGLTGGISDNRGGGGGDGSGASFHEAGGGGVSSCDGGGGDGDGGGGVSDHGGGVSSHVDGGGSSFGGGGASSYDGGG--HYDHGGGG---
                          D    G GDG+GASFHEAGGG           G GGG VSDHGGG S H+DGG S+FGGG +S   GGG  +YDHGGGG   
Subjt:  NSEVVGGENNGGLTGGISDNRGGGGGDGSGASFHEAGGGGVSSCDGGGGDGDGGGGVSDHGGGVSSHVDGGGSSFGGGGASSYDGGG--HYDHGGGG---

Query:  ----GGGGGFSDYGGGGGGGGFDFGGGGGSSF
            GGGGG SDY  GGGGGG+DFGGGGGSSF
Subjt:  ----GGGGGFSDYGGGGGGGGFDFGGGGGSSF

TrEMBL top hitse value%identityAlignment
A0A6J1EUX9 glycine-rich protein 23-like6.5e-3658.7Show/hide
Query:  MVRTAYIVSPILGVLIISVVITLLCLFRRRKVSKEKGKSARESGSYVEGGNRSIGIVVDDGSNNMTTTGSNMFSGSYGGWGWDWTFSNIGDT----GNSG
        MVRTAYIV PI+G  II  V+ L CL  RR+VSK      R+SGSYVEGGNR IGIVVDDGS   TT    MF+G YGGWGWDWTFS++GDT    GN G
Subjt:  MVRTAYIVSPILGVLIISVVITLLCLFRRRKVSKEKGKSARESGSYVEGGNRSIGIVVDDGSNNMTTTGSNMFSGSYGGWGWDWTFSNIGDT----GNSG

Query:  GGCDVEEGGGDGDGGGVGCYGGNSEVVGGENNGGLTGGISDNRGGGGGDGSGASFHEAGGGGVSSCDGGGGDGDGGGGVSDHGGGVSSHVDGGGSSFGGG
        GGCDV  GGGD + GG G     S++           G  D  G G GDG+GASFHEAGGG           G GGG VSD GGG S H+DGG S+FGGG
Subjt:  GGCDVEEGGGDGDGGGVGCYGGNSEVVGGENNGGLTGGISDNRGGGGGDGSGASFHEAGGGGVSSCDGGGGDGDGGGGVSDHGGGVSSHVDGGGSSFGGG

Query:  GASSYDGGG--HYDHGGGGGGGGGFSDYGGGGGGGGFDFGGGGGSSF
         +S   GGG   YDH    GGGGG SDY  GGGGGG+DFGGGGGSSF
Subjt:  GASSYDGGG--HYDHGGGGGGGGGFSDYGGGGGGGGFDFGGGGGSSF

A0A6J1HSN5 loricrin-like4.3e-3260.17Show/hide
Query:  LLCLFRRRKVSKEKGKSARESGSYVEGGNRSIGIVVDDGSNNMTTTGSNMFSGSYGGWGWDWTFSNIGDT--GNSGGGCDVEEGGGDGDGGGVGCYGGNS
        L CL  RR+VSK      R+SGSYVEGGNR IGIVVDDGS   TT    MF+G YGGWGWDWTFS++GDT  GN GGGCDV  GGGD + GG G     S
Subjt:  LLCLFRRRKVSKEKGKSARESGSYVEGGNRSIGIVVDDGSNNMTTTGSNMFSGSYGGWGWDWTFSNIGDT--GNSGGGCDVEEGGGDGDGGGVGCYGGNS

Query:  EVVGGENNGGLTGGISDNRGGGGGDGSGASFHEAGGGGVSSCDGGGGDGDGGGGVSDHGGGVSSHVDGGGSSFGGGGASSYDGGG---HYDHGGGG----
        +V           G  D  G G GDG+GASFHEAGGG           G GGG VSDHGGG S H+DGG S+F GGGASS+ GGG    +DHGGGG    
Subjt:  EVVGGENNGGLTGGISDNRGGGGGDGSGASFHEAGGGGVSSCDGGGGDGDGGGGVSDHGGGVSSHVDGGGSSFGGGGASSYDGGG---HYDHGGGG----

Query:  ---GGGGGFSDYGGGGGGGGFDFGGGGGSSF
           GGGGG SDY  GGGGGGFDFGGGGGSSF
Subjt:  ---GGGGGFSDYGGGGGGGGFDFGGGGGSSF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTAGAACAGCATACATCGTTTCGCCCATTCTTGGTGTTCTTATTATTTCTGTTGTTATAACTCTGTTGTGCTTGTTTCGGCGGAGGAAAGTTTCAAAGGAAAAAGG
TAAAAGTGCGAGAGAAAGTGGAAGTTATGTTGAAGGTGGAAACAGAAGCATTGGCATAGTTGTGGATGATGGGAGCAATAATATGACTACAACAGGCAGCAATATGTTTT
CCGGCAGTTATGGTGGTTGGGGTTGGGATTGGACTTTTAGTAATATAGGAGATACGGGCAACAGCGGAGGCGGCTGTGATGTTGAAGAAGGTGGCGGTGATGGTGACGGT
GGTGGTGTTGGGTGTTATGGAGGGAATAGTGAGGTTGTTGGAGGTGAAAATAATGGTGGCCTTACTGGAGGAATAAGTGATAACAGAGGAGGCGGTGGCGGAGATGGCAG
TGGAGCGAGTTTTCACGAGGCAGGCGGTGGTGGAGTGAGTTCTTGCGACGGAGGTGGTGGTGATGGAGATGGAGGTGGAGGGGTTTCTGATCATGGAGGTGGTGTGAGTT
CTCATGTGGATGGAGGAGGTTCTAGTTTTGGAGGTGGAGGAGCGAGTTCTTATGATGGCGGAGGACATTATGATCATGGCGGAGGTGGTGGTGGAGGTGGAGGGTTTTCT
GATTATGGAGGTGGTGGAGGGGGAGGGGGTTTTGATTTTGGAGGAGGCGGAGGATCATCTTTTTGCGGCAGACACATTTACGATGGAGGCCAAATTGACGTAGCTATTGA
TAATGGGAATGATACGGATACAAGCACCTTCGCCGGAGATGGAGCTGTAGATACAGGTGGTGATTGGGGTTTTAATGGCAATAATGGATGGGGCTGTAATGCTGGAGGTG
GTGGCGGTGGCTTTAGTGGGGTAGGAGGATATGACGGTGGAGGTGGTGGCGGCTTCGGTGGGGGAGGGGGATGCGATACTGGAGGCGGTGGTGGAGGTTCAACTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTAGAACAGCATACATCGTTTCGCCCATTCTTGGTGTTCTTATTATTTCTGTTGTTATAACTCTGTTGTGCTTGTTTCGGCGGAGGAAAGTTTCAAAGGAAAAAGG
TAAAAGTGCGAGAGAAAGTGGAAGTTATGTTGAAGGTGGAAACAGAAGCATTGGCATAGTTGTGGATGATGGGAGCAATAATATGACTACAACAGGCAGCAATATGTTTT
CCGGCAGTTATGGTGGTTGGGGTTGGGATTGGACTTTTAGTAATATAGGAGATACGGGCAACAGCGGAGGCGGCTGTGATGTTGAAGAAGGTGGCGGTGATGGTGACGGT
GGTGGTGTTGGGTGTTATGGAGGGAATAGTGAGGTTGTTGGAGGTGAAAATAATGGTGGCCTTACTGGAGGAATAAGTGATAACAGAGGAGGCGGTGGCGGAGATGGCAG
TGGAGCGAGTTTTCACGAGGCAGGCGGTGGTGGAGTGAGTTCTTGCGACGGAGGTGGTGGTGATGGAGATGGAGGTGGAGGGGTTTCTGATCATGGAGGTGGTGTGAGTT
CTCATGTGGATGGAGGAGGTTCTAGTTTTGGAGGTGGAGGAGCGAGTTCTTATGATGGCGGAGGACATTATGATCATGGCGGAGGTGGTGGTGGAGGTGGAGGGTTTTCT
GATTATGGAGGTGGTGGAGGGGGAGGGGGTTTTGATTTTGGAGGAGGCGGAGGATCATCTTTTTGCGGCAGACACATTTACGATGGAGGCCAAATTGACGTAGCTATTGA
TAATGGGAATGATACGGATACAAGCACCTTCGCCGGAGATGGAGCTGTAGATACAGGTGGTGATTGGGGTTTTAATGGCAATAATGGATGGGGCTGTAATGCTGGAGGTG
GTGGCGGTGGCTTTAGTGGGGTAGGAGGATATGACGGTGGAGGTGGTGGCGGCTTCGGTGGGGGAGGGGGATGCGATACTGGAGGCGGTGGTGGAGGTTCAACTTAG
Protein sequenceShow/hide protein sequence
MVRTAYIVSPILGVLIISVVITLLCLFRRRKVSKEKGKSARESGSYVEGGNRSIGIVVDDGSNNMTTTGSNMFSGSYGGWGWDWTFSNIGDTGNSGGGCDVEEGGGDGDG
GGVGCYGGNSEVVGGENNGGLTGGISDNRGGGGGDGSGASFHEAGGGGVSSCDGGGGDGDGGGGVSDHGGGVSSHVDGGGSSFGGGGASSYDGGGHYDHGGGGGGGGGFS
DYGGGGGGGGFDFGGGGGSSFCGRHIYDGGQIDVAIDNGNDTDTSTFAGDGAVDTGGDWGFNGNNGWGCNAGGGGGGFSGVGGYDGGGGGGFGGGGGCDTGGGGGGST