; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi01G014690 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G014690
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionCtenidin-1-like
Genome locationchr01:12778221..12778502
RNA-Seq ExpressionLsi01G014690
SyntenyLsi01G014690
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045150.1 ctenidin-1-like [Cucumis melo var. makuwa]1.2e-0559.57Show/hide
Query:  IIIPVVFLSVCVVVTALIVLCRWTSGGSSS-GGHAHFVGAAHDGGFHHHHHHHGDAGGHHAA--HHFGGGGHDC----GGGGGGGGFGGGSSAC
        +II +VF+ + V    L ++C W SG SSS GGHAHF GAAHDGGFHHH   H     HH A   H GGGGHDC    GGGGGGGG GG SSAC
Subjt:  IIIPVVFLSVCVVVTALIVLCRWTSGGSSS-GGHAHFVGAAHDGGFHHHHHHHGDAGGHHAA--HHFGGGGHDC----GGGGGGGGFGGGSSAC

KAG6581831.1 hypothetical protein SDJN03_21833, partial [Cucurbita argyrosperma subsp. sororia]1.7e-1568.82Show/hide
Query:  MVNPAFIIIPVVFLSVCVVVTALIVLCRWTSGGSSSGGHAHFVGAAHDGGFHHHHHHHGDAGGHHAAHHFGGGGHDCGGGGGGGGFGGGSSAC
        MV+PAFIIIPVVFLS+CVV T L +LCR T+GG++SGG AHF GAAH GG HH H     A  HHA  HFGGGGHD GGGGGGGG GGG   C
Subjt:  MVNPAFIIIPVVFLSVCVVVTALIVLCRWTSGGSSSGGHAHFVGAAHDGGFHHHHHHHGDAGGHHAAHHFGGGGHDCGGGGGGGGFGGGSSAC

KGN54297.1 hypothetical protein Csa_018030 [Cucumis sativus]4.5e-0558.43Show/hide
Query:  MVNPAFIIIPVVFLSVCVVVTALIVLCRWTSGGSSSGGHAHFVGAAHDGGFHHHHHHHGDAGGHHAAHHFGGGGHDCGGGGGGGGFGGG
        MV+ AFIIIPVVFLS+CVV   L +LCRWT GGSS+G  AHF GA   GG        G+ GG    +  GGGG+D GGG GGGG GGG
Subjt:  MVNPAFIIIPVVFLSVCVVVTALIVLCRWTSGGSSSGGHAHFVGAAHDGGFHHHHHHHGDAGGHHAAHHFGGGGHDCGGGGGGGGFGGG

KGN54298.1 hypothetical protein Csa_017993 [Cucumis sativus]1.7e-0761.7Show/hide
Query:  MVNPAFIIIPVVFLSVCVVVTALIVLCRWTSGGSSS-GGHAHFVGAAHDGGFHHHHHHHGDAGGHHAAHHFGGGGHDCGGGGGGGGFGGGSSAC
        M +P F+I+P+VF+SV V+ T L  +C WTSG SSS GGHAHF GAAH GGFHHH   H     H A  H GGGGH CGGG GGG  GG SSAC
Subjt:  MVNPAFIIIPVVFLSVCVVVTALIVLCRWTSGGSSS-GGHAHFVGAAHDGGFHHHHHHHGDAGGHHAAHHFGGGGHDCGGGGGGGGFGGGSSAC

XP_011654372.1 glycine-rich protein DOT1 [Cucumis sativus]1.8e-0661.29Show/hide
Query:  MVNPAFIIIPVVFLSVCVVVTALIVLCRWTSGGSSS-GGHAHFVGAAHDGGFHHHHHHHGDAGGHHAAHHFGGGGHDCGGGGGGGGFGGGSSA
        M +P F+I+P+VF+SV V+ T L  +C WTSG SSS GGHAHF GAAH GGFHHH   H     H A  H GGGGH CGGG GGG  GG SSA
Subjt:  MVNPAFIIIPVVFLSVCVVVTALIVLCRWTSGGSSS-GGHAHFVGAAHDGGFHHHHHHHGDAGGHHAAHHFGGGGHDCGGGGGGGGFGGGSSA

TrEMBL top hitse value%identityAlignment
A0A0A0KXN6 Uncharacterized protein8.0e-0861.7Show/hide
Query:  MVNPAFIIIPVVFLSVCVVVTALIVLCRWTSGGSSS-GGHAHFVGAAHDGGFHHHHHHHGDAGGHHAAHHFGGGGHDCGGGGGGGGFGGGSSAC
        M +P F+I+P+VF+SV V+ T L  +C WTSG SSS GGHAHF GAAH GGFHHH   H     H A  H GGGGH CGGG GGG  GG SSAC
Subjt:  MVNPAFIIIPVVFLSVCVVVTALIVLCRWTSGGSSS-GGHAHFVGAAHDGGFHHHHHHHGDAGGHHAAHHFGGGGHDCGGGGGGGGFGGGSSAC

A0A0A0L128 Uncharacterized protein2.2e-0558.43Show/hide
Query:  MVNPAFIIIPVVFLSVCVVVTALIVLCRWTSGGSSSGGHAHFVGAAHDGGFHHHHHHHGDAGGHHAAHHFGGGGHDCGGGGGGGGFGGG
        MV+ AFIIIPVVFLS+CVV   L +LCRWT GGSS+G  AHF GA   GG        G+ GG    +  GGGG+D GGG GGGG GGG
Subjt:  MVNPAFIIIPVVFLSVCVVVTALIVLCRWTSGGSSSGGHAHFVGAAHDGGFHHHHHHHGDAGGHHAAHHFGGGGHDCGGGGGGGGFGGG

A0A5D3DIY3 Ctenidin-1-like5.8e-0659.57Show/hide
Query:  IIIPVVFLSVCVVVTALIVLCRWTSGGSSS-GGHAHFVGAAHDGGFHHHHHHHGDAGGHHAA--HHFGGGGHDC----GGGGGGGGFGGGSSAC
        +II +VF+ + V    L ++C W SG SSS GGHAHF GAAHDGGFHHH   H     HH A   H GGGGHDC    GGGGGGGG GG SSAC
Subjt:  IIIPVVFLSVCVVVTALIVLCRWTSGGSSS-GGHAHFVGAAHDGGFHHHHHHHGDAGGHHAA--HHFGGGGHDC----GGGGGGGGFGGGSSAC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTAATCCGGCATTTATTATAATCCCAGTGGTTTTTCTTTCAGTTTGTGTAGTTGTAACGGCGTTGATTGTACTTTGCCGGTGGACATCTGGTGGCAGTTCCAGCGG
AGGACATGCTCATTTCGTCGGAGCTGCCCATGATGGAGGATTTCATCATCATCATCATCATCATGGAGATGCCGGCGGCCACCACGCAGCACACCATTTTGGAGGTGGAG
GACACGATTGTGGAGGTGGCGGTGGTGGAGGCGGCTTCGGCGGCGGTAGCTCTGCCTGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTAATCCGGCATTTATTATAATCCCAGTGGTTTTTCTTTCAGTTTGTGTAGTTGTAACGGCGTTGATTGTACTTTGCCGGTGGACATCTGGTGGCAGTTCCAGCGG
AGGACATGCTCATTTCGTCGGAGCTGCCCATGATGGAGGATTTCATCATCATCATCATCATCATGGAGATGCCGGCGGCCACCACGCAGCACACCATTTTGGAGGTGGAG
GACACGATTGTGGAGGTGGCGGTGGTGGAGGCGGCTTCGGCGGCGGTAGCTCTGCCTGTTGA
Protein sequenceShow/hide protein sequence
MVNPAFIIIPVVFLSVCVVVTALIVLCRWTSGGSSSGGHAHFVGAAHDGGFHHHHHHHGDAGGHHAAHHFGGGGHDCGGGGGGGGFGGGSSAC