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Lsi01G014810 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G014810
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr01:12898272..12898682
RNA-Seq ExpressionLsi01G014810
SyntenyLsi01G014810
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595353.1 hypothetical protein SDJN03_11906, partial [Cucurbita argyrosperma subsp. sororia]8.0e-2762.1Show/hide
Query:  MPPFLLFLFILANALLNSVSVGAAPPPTSAESPSGRKLGKHQSTAVVFSSPSEAPRSEMKVQGTSAAASGGESGNEIQLENHEHHKSRDKSIAGGGVILG
        M PFL  LFI A+ALL+S +V A P       PS RKLG H S A V SSPSEAP+SE+KV                 LEN EHHKSRD SIAGGGVILG
Subjt:  MPPFLLFLFILANALLNSVSVGAAPPPTSAESPSGRKLGKHQSTAVVFSSPSEAPRSEMKVQGTSAAASGGESGNEIQLENHEHHKSRDKSIAGGGVILG

Query:  GLATTFLVAVICYIRATRRQNSEV
        GLATTF VA+ICYIRAT+RQNSEV
Subjt:  GLATTFLVAVICYIRATRRQNSEV

KAG6603622.1 hypothetical protein SDJN03_04231, partial [Cucurbita argyrosperma subsp. sororia]6.8e-4278.4Show/hide
Query:  MPPFLLFLFILANALLNSVSVGAAPPPTSAESPSGRKLGKHQSTAVVFSSPSEAPRSEMKVQGTSAAASGGESGNEIQLENHEHHKSRDKSIAGGGVILG
        M PFL  LFI ANALL SV+VGAAPPPT+AE PSGRKLGKH STAVVFSSPSEAPRSE KV    + A+ G +GNEI+LENHEHHKS DKS+AGGGVILG
Subjt:  MPPFLLFLFILANALLNSVSVGAAPPPTSAESPSGRKLGKHQSTAVVFSSPSEAPRSEMKVQGTSAAASGGESGNEIQLENHEHHKSRDKSIAGGGVILG

Query:  GLATTFLVAVICYIRATRRQNSEVN
        GLATTFLVA++CYIRATRRQ SEV+
Subjt:  GLATTFLVAVICYIRATRRQNSEVN

KGN54308.1 hypothetical protein Csa_017945 [Cucumis sativus]1.7e-4580.16Show/hide
Query:  MPPFLLFLFILANALLNSVSVGAAPPPTSAESPSGRKLGKHQSTAVVFSSPSEAPRSEMKVQGTSAAASGGESGNEIQLENHEHHKSRDKSIAGGGVILG
        +PPFL  LFI ANAL +S++  AAPPPTSAESPS RKLGKHQSTA+ FSSP+EAPRS MKVQGTS  ASGGESGN ++L NH+HHKSRDKSIAGGGVILG
Subjt:  MPPFLLFLFILANALLNSVSVGAAPPPTSAESPSGRKLGKHQSTAVVFSSPSEAPRSEMKVQGTSAAASGGESGNEIQLENHEHHKSRDKSIAGGGVILG

Query:  GLATTFLVAVICYIRATRRQNSEVNS
        GLATTFLVAVICYIRATRRQ SE+ S
Subjt:  GLATTFLVAVICYIRATRRQNSEVNS

XP_008448528.1 PREDICTED: uncharacterized protein LOC103490675 [Cucumis melo]5.9e-4680.95Show/hide
Query:  MPPFLLFLFILANALLNSVSVGAAPPPTSAESPSGRKLGKHQSTAVVFSSPSEAPRSEMKVQGTSAAASGGESGNEIQLENHEHHKSRDKSIAGGGVILG
        +PPFL  LFI ANA  +S++  AAPPPTSAESPS RKLGKHQSTA+ FSSP EAPRSEMKVQGTS AASGGESGN +QL NH+HHKSRDKSIAGGGVILG
Subjt:  MPPFLLFLFILANALLNSVSVGAAPPPTSAESPSGRKLGKHQSTAVVFSSPSEAPRSEMKVQGTSAAASGGESGNEIQLENHEHHKSRDKSIAGGGVILG

Query:  GLATTFLVAVICYIRATRRQNSEVNS
        GLATTFLVA+ICYIRATRRQ SE+ S
Subjt:  GLATTFLVAVICYIRATRRQNSEVNS

XP_022151558.1 uncharacterized protein LOC111019472 [Momordica charantia]5.4e-3167.67Show/hide
Query:  MPPFLLFLFILANALLNSVSV-----GAAPPP--TSAESPSGRKLGKHQSTAVVF--SSPSEAPRSEMKVQGTSAAASGGESGNEIQLENHEHHKSRDKS
        M  FL  LFI ANA LNSV V     GAAP P  T AE+PS RKLGKH+S A V   SSPSEAPRSEMKVQ TSAAA+ G          H +HK+ DKS
Subjt:  MPPFLLFLFILANALLNSVSV-----GAAPPP--TSAESPSGRKLGKHQSTAVVF--SSPSEAPRSEMKVQGTSAAASGGESGNEIQLENHEHHKSRDKS

Query:  IAGGGVILGGLATTFLVAVICYIRATRRQNSEV
        IAGGGVILGGLATTFLVA+ICYIRATRR NSEV
Subjt:  IAGGGVILGGLATTFLVAVICYIRATRRQNSEV

TrEMBL top hitse value%identityAlignment
A0A0A0KXQ0 Uncharacterized protein8.3e-4680.16Show/hide
Query:  MPPFLLFLFILANALLNSVSVGAAPPPTSAESPSGRKLGKHQSTAVVFSSPSEAPRSEMKVQGTSAAASGGESGNEIQLENHEHHKSRDKSIAGGGVILG
        +PPFL  LFI ANAL +S++  AAPPPTSAESPS RKLGKHQSTA+ FSSP+EAPRS MKVQGTS  ASGGESGN ++L NH+HHKSRDKSIAGGGVILG
Subjt:  MPPFLLFLFILANALLNSVSVGAAPPPTSAESPSGRKLGKHQSTAVVFSSPSEAPRSEMKVQGTSAAASGGESGNEIQLENHEHHKSRDKSIAGGGVILG

Query:  GLATTFLVAVICYIRATRRQNSEVNS
        GLATTFLVAVICYIRATRRQ SE+ S
Subjt:  GLATTFLVAVICYIRATRRQNSEVNS

A0A1S3BJV8 uncharacterized protein LOC1034906752.9e-4680.95Show/hide
Query:  MPPFLLFLFILANALLNSVSVGAAPPPTSAESPSGRKLGKHQSTAVVFSSPSEAPRSEMKVQGTSAAASGGESGNEIQLENHEHHKSRDKSIAGGGVILG
        +PPFL  LFI ANA  +S++  AAPPPTSAESPS RKLGKHQSTA+ FSSP EAPRSEMKVQGTS AASGGESGN +QL NH+HHKSRDKSIAGGGVILG
Subjt:  MPPFLLFLFILANALLNSVSVGAAPPPTSAESPSGRKLGKHQSTAVVFSSPSEAPRSEMKVQGTSAAASGGESGNEIQLENHEHHKSRDKSIAGGGVILG

Query:  GLATTFLVAVICYIRATRRQNSEVNS
        GLATTFLVA+ICYIRATRRQ SE+ S
Subjt:  GLATTFLVAVICYIRATRRQNSEVNS

A0A5A7TSM2 Uncharacterized protein2.9e-4680.95Show/hide
Query:  MPPFLLFLFILANALLNSVSVGAAPPPTSAESPSGRKLGKHQSTAVVFSSPSEAPRSEMKVQGTSAAASGGESGNEIQLENHEHHKSRDKSIAGGGVILG
        +PPFL  LFI ANA  +S++  AAPPPTSAESPS RKLGKHQSTA+ FSSP EAPRSEMKVQGTS AASGGESGN +QL NH+HHKSRDKSIAGGGVILG
Subjt:  MPPFLLFLFILANALLNSVSVGAAPPPTSAESPSGRKLGKHQSTAVVFSSPSEAPRSEMKVQGTSAAASGGESGNEIQLENHEHHKSRDKSIAGGGVILG

Query:  GLATTFLVAVICYIRATRRQNSEVNS
        GLATTFLVA+ICYIRATRRQ SE+ S
Subjt:  GLATTFLVAVICYIRATRRQNSEVNS

A0A5D2BCQ1 Uncharacterized protein4.8e-1743.05Show/hide
Query:  MPPFLLFLFILANALLNSVSVGAAPPPT-----SAESPSGRKLGKHQSTAVV----FSSPSEAPRSEMKVQGTSAAASGGES---------------GNE
        M   LL    L NA +   + G AP P       AE+P+ RKLGKHQ          SSPS+AP ++  +  T  + S   +               G  
Subjt:  MPPFLLFLFILANALLNSVSVGAAPPPT-----SAESPSGRKLGKHQSTAVV----FSSPSEAPRSEMKVQGTSAAASGGES---------------GNE

Query:  IQLENHEHHKSRDKSIAGGGVILGGLATTFLVAVICYIRATRRQNSEVNSA
        I L+NH HH S DKS+AGGGVILGGLATTFLVAV CYIRAT R   E + +
Subjt:  IQLENHEHHKSRDKSIAGGGVILGGLATTFLVAVICYIRATRRQNSEVNSA

A0A6J1DCH7 uncharacterized protein LOC1110194722.6e-3167.67Show/hide
Query:  MPPFLLFLFILANALLNSVSV-----GAAPPP--TSAESPSGRKLGKHQSTAVVF--SSPSEAPRSEMKVQGTSAAASGGESGNEIQLENHEHHKSRDKS
        M  FL  LFI ANA LNSV V     GAAP P  T AE+PS RKLGKH+S A V   SSPSEAPRSEMKVQ TSAAA+ G          H +HK+ DKS
Subjt:  MPPFLLFLFILANALLNSVSV-----GAAPPP--TSAESPSGRKLGKHQSTAVVF--SSPSEAPRSEMKVQGTSAAASGGESGNEIQLENHEHHKSRDKS

Query:  IAGGGVILGGLATTFLVAVICYIRATRRQNSEV
        IAGGGVILGGLATTFLVA+ICYIRATRR NSEV
Subjt:  IAGGGVILGGLATTFLVAVICYIRATRRQNSEV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G09280.1 unknown protein1.5e-1040.62Show/hide
Query:  APPPTSAESPSGRKLGKHQSTAVVFSSPSEAPRSEMKVQGTSAAASGGESGNEIQLENHEHHKSRDKSIAGGGVILGGLATTFLVAVICYIRATRR
        A   + AE P+ RKLG+H+       +P  +   E   +G                    HH + ++S+AGGGVILGGLATTFLV V CYIRATR+
Subjt:  APPPTSAESPSGRKLGKHQSTAVVFSSPSEAPRSEMKVQGTSAAASGGESGNEIQLENHEHHKSRDKSIAGGGVILGGLATTFLVAVICYIRATRR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCCATTTCTACTCTTTCTCTTCATCCTCGCCAATGCTCTTCTCAATTCAGTCTCCGTCGGAGCCGCTCCACCGCCGACCTCCGCCGAATCGCCTTCCGGAAGAAA
GCTCGGGAAGCACCAGAGTACGGCAGTTGTTTTTTCGAGTCCGTCTGAAGCGCCGCGAAGCGAAATGAAAGTTCAGGGGACCTCGGCGGCGGCGAGCGGTGGAGAGAGTG
GAAATGAGATTCAGTTGGAAAATCATGAGCATCATAAGTCGAGAGATAAGTCTATCGCCGGTGGCGGCGTGATTTTGGGCGGACTTGCTACTACTTTTCTGGTGGCGGTT
ATATGTTACATTAGAGCTACGAGGCGACAGAACTCGGAAGTGAACTCAGCTTTTGAGACGACATGTCGTCCGCGTTGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCTCCATTTCTACTCTTTCTCTTCATCCTCGCCAATGCTCTTCTCAATTCAGTCTCCGTCGGAGCCGCTCCACCGCCGACCTCCGCCGAATCGCCTTCCGGAAGAAA
GCTCGGGAAGCACCAGAGTACGGCAGTTGTTTTTTCGAGTCCGTCTGAAGCGCCGCGAAGCGAAATGAAAGTTCAGGGGACCTCGGCGGCGGCGAGCGGTGGAGAGAGTG
GAAATGAGATTCAGTTGGAAAATCATGAGCATCATAAGTCGAGAGATAAGTCTATCGCCGGTGGCGGCGTGATTTTGGGCGGACTTGCTACTACTTTTCTGGTGGCGGTT
ATATGTTACATTAGAGCTACGAGGCGACAGAACTCGGAAGTGAACTCAGCTTTTGAGACGACATGTCGTCCGCGTTGTTAG
Protein sequenceShow/hide protein sequence
MPPFLLFLFILANALLNSVSVGAAPPPTSAESPSGRKLGKHQSTAVVFSSPSEAPRSEMKVQGTSAAASGGESGNEIQLENHEHHKSRDKSIAGGGVILGGLATTFLVAV
ICYIRATRRQNSEVNSAFETTCRPRC