CuGenDBv2

Gene ID	Lsi01G015060
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	proteasome assembly chaperone 4
Genome location	chr01:13128531..13131423
RNA-Seq Expression	Lsi01G015060
Synteny	Lsi01G015060
Gene Ontology terms	GO:0043248 - proteasome assembly (biological process) GO:0000502 - proteasome complex (cellular component)
InterPro domains	IPR032157 - Proteasome assembly chaperone 4

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0045091.1 proteasome assembly chaperone 4 [Cucumis melo var. makuwa]

1.5e-67

83.54

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Query:  MLYQGQISKEEQPLASPSSSNNDDNLDGGGVRVTCFSEAINDVPIHFQIICLSKQIYVWIGCNSAKLGNLYAAAPTRPNNTVSVTSILGGSSDNTGSTMA
        ML++GQISKEEQPLASPSSSN++DNLDGGGVRVTCFSEAINDVPIHFQIICLSKQIY+WIGCNSAK GNLYAAAPTRPNNTVSVTS+LGGSSDNTGS+MA
Subjt:  MLYQGQISKEEQPLASPSSSNNDDNLDGGGVRVTCFSEAINDVPIHFQIICLSKQIYVWIGCNSAKLGNLYAAAPTRPNNTVSVTSILGGSSDNTGSTMA

Query:  RRLVLFFNIITNTLVPPFLVLKTGLNIILASNIPKNSPMIEVAAEKILVQKLATLGHIRPKSEG
        RR                LVLKTGLNIILASNIPKNSPMIEVAAEK+LVQKL TLG+IRPKSEG
Subjt:  RRLVLFFNIITNTLVPPFLVLKTGLNIILASNIPKNSPMIEVAAEKILVQKLATLGHIRPKSEG

XP_004147905.1 proteasome assembly chaperone 4 [Cucumis sativus]

2.5e-62

79.04

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Query:  MLYQGQISKEEQPLASPSSSNNDDNLDGGGVRVTCFSEAINDVPIHFQIICLSKQIYVWIGCNSAKLGNLYAAAPTRPNNTVSVTSILGGSSDNTGSTMA
        ML++GQISKEEQ  ASPS+SN++ NLD   VRVTCFSEAINDVPIHFQIICLSKQIYVWIGCNSAK GNLYAAAPTRPNNTVSVTSILGGSSDNTGS+MA
Subjt:  MLYQGQISKEEQPLASPSSSNNDDNLDGGGVRVTCFSEAINDVPIHFQIICLSKQIYVWIGCNSAKLGNLYAAAPTRPNNTVSVTSILGGSSDNTGSTMA

Query:  RRLVLFFNIITNTLVPPFLVLKTGLNIILASNIPKNSPMIEVAAEKILVQKLATLGHIRPKSEGPSR
        RR                LVLKTGLNIILASNIPKNSP+IEVAAEK+LVQKL TLG++RPK EGPSR
Subjt:  RRLVLFFNIITNTLVPPFLVLKTGLNIILASNIPKNSPMIEVAAEKILVQKLATLGHIRPKSEGPSR

XP_008448802.1 PREDICTED: proteasome assembly chaperone 4 [Cucumis melo]

2.1e-69

83.83

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Query:  MLYQGQISKEEQPLASPSSSNNDDNLDGGGVRVTCFSEAINDVPIHFQIICLSKQIYVWIGCNSAKLGNLYAAAPTRPNNTVSVTSILGGSSDNTGSTMA
        ML++GQISKEEQPLASPSSSN++DNLDGGGVRVTCFSEAINDVPIHFQIICLSKQIY+WIGCNSAK GNLYAAAPTRPNNTVSVTS+LGGSSDNTGS+MA
Subjt:  MLYQGQISKEEQPLASPSSSNNDDNLDGGGVRVTCFSEAINDVPIHFQIICLSKQIYVWIGCNSAKLGNLYAAAPTRPNNTVSVTSILGGSSDNTGSTMA

Query:  RRLVLFFNIITNTLVPPFLVLKTGLNIILASNIPKNSPMIEVAAEKILVQKLATLGHIRPKSEGPSR
        RR                LVLKTGLNIILASNIPKNSPMIEVAAEK+LVQKL TLG+IRPKSEGPSR
Subjt:  RRLVLFFNIITNTLVPPFLVLKTGLNIILASNIPKNSPMIEVAAEKILVQKLATLGHIRPKSEGPSR

XP_023526532.1 proteasome assembly chaperone 4 [Cucurbita pepo subsp. pepo]

8.5e-63

80.24

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Query:  MLYQGQISKEEQPLASPSSSNNDD-NLDGGGVRVTCFSEAINDVPIHFQIICLSKQIYVWIGCNSAKLGNLYAAAPTRPNNTVSVTSILGGSSDNTGSTM
        MLYQ QISKEEQ LASPSSSNNDD +LDGGG++VTCFSEAINDVPIHFQII L KQIY WIGCNSAK GNLYAAAPTRPNNTVSVTS+LGGSSDNTGSTM
Subjt:  MLYQGQISKEEQPLASPSSSNNDD-NLDGGGVRVTCFSEAINDVPIHFQIICLSKQIYVWIGCNSAKLGNLYAAAPTRPNNTVSVTSILGGSSDNTGSTM

Query:  ARRLVLFFNIITNTLVPPFLVLKTGLNIILASNIPKNSPMIEVAAEKILVQKLATLGHIRPKSEGPS
        ARR                LVLKTGLNI+LASNIPKNSP+IEVAAEK+LVQKL +LG IRPKSEGPS
Subjt:  ARRLVLFFNIITNTLVPPFLVLKTGLNIILASNIPKNSPMIEVAAEKILVQKLATLGHIRPKSEGPS

XP_038881184.1 proteasome assembly chaperone 4 [Benincasa hispida]

7.2e-70

85.03

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Query:  MLYQGQISKEEQPLASPSSSNNDDNLDGGGVRVTCFSEAINDVPIHFQIICLSKQIYVWIGCNSAKLGNLYAAAPTRPNNTVSVTSILGGSSDNTGSTMA
        MLYQGQISKEEQP++SPS SNNDDNLDGGGV+VTCFSEAINDVPIHFQIICLSKQIYVWIGCNSAK+GNLYAAAPTRPNNTVSVTSILGGSSDNTGS+MA
Subjt:  MLYQGQISKEEQPLASPSSSNNDDNLDGGGVRVTCFSEAINDVPIHFQIICLSKQIYVWIGCNSAKLGNLYAAAPTRPNNTVSVTSILGGSSDNTGSTMA

Query:  RRLVLFFNIITNTLVPPFLVLKTGLNIILASNIPKNSPMIEVAAEKILVQKLATLGHIRPKSEGPSR
        RR                LVLK+GLNIILASNIPKNSPMIEVAAEKILVQKL TLG+IRPKSEGPSR
Subjt:  RRLVLFFNIITNTLVPPFLVLKTGLNIILASNIPKNSPMIEVAAEKILVQKLATLGHIRPKSEGPSR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KZU0 Uncharacterized protein

1.2e-62

79.04

Show/hide

Query:  MLYQGQISKEEQPLASPSSSNNDDNLDGGGVRVTCFSEAINDVPIHFQIICLSKQIYVWIGCNSAKLGNLYAAAPTRPNNTVSVTSILGGSSDNTGSTMA
        ML++GQISKEEQ  ASPS+SN++ NLD   VRVTCFSEAINDVPIHFQIICLSKQIYVWIGCNSAK GNLYAAAPTRPNNTVSVTSILGGSSDNTGS+MA
Subjt:  MLYQGQISKEEQPLASPSSSNNDDNLDGGGVRVTCFSEAINDVPIHFQIICLSKQIYVWIGCNSAKLGNLYAAAPTRPNNTVSVTSILGGSSDNTGSTMA

Query:  RRLVLFFNIITNTLVPPFLVLKTGLNIILASNIPKNSPMIEVAAEKILVQKLATLGHIRPKSEGPSR
        RR                LVLKTGLNIILASNIPKNSP+IEVAAEK+LVQKL TLG++RPK EGPSR
Subjt:  RRLVLFFNIITNTLVPPFLVLKTGLNIILASNIPKNSPMIEVAAEKILVQKLATLGHIRPKSEGPSR

A0A1S3BJY7 proteasome assembly chaperone 4

1.0e-69

83.83

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Query:  MLYQGQISKEEQPLASPSSSNNDDNLDGGGVRVTCFSEAINDVPIHFQIICLSKQIYVWIGCNSAKLGNLYAAAPTRPNNTVSVTSILGGSSDNTGSTMA
        ML++GQISKEEQPLASPSSSN++DNLDGGGVRVTCFSEAINDVPIHFQIICLSKQIY+WIGCNSAK GNLYAAAPTRPNNTVSVTS+LGGSSDNTGS+MA
Subjt:  MLYQGQISKEEQPLASPSSSNNDDNLDGGGVRVTCFSEAINDVPIHFQIICLSKQIYVWIGCNSAKLGNLYAAAPTRPNNTVSVTSILGGSSDNTGSTMA

Query:  RRLVLFFNIITNTLVPPFLVLKTGLNIILASNIPKNSPMIEVAAEKILVQKLATLGHIRPKSEGPSR
        RR                LVLKTGLNIILASNIPKNSPMIEVAAEK+LVQKL TLG+IRPKSEGPSR
Subjt:  RRLVLFFNIITNTLVPPFLVLKTGLNIILASNIPKNSPMIEVAAEKILVQKLATLGHIRPKSEGPSR

A0A5D3BBH2 Proteasome assembly chaperone 4

7.3e-68

83.54

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Query:  MLYQGQISKEEQPLASPSSSNNDDNLDGGGVRVTCFSEAINDVPIHFQIICLSKQIYVWIGCNSAKLGNLYAAAPTRPNNTVSVTSILGGSSDNTGSTMA
        ML++GQISKEEQPLASPSSSN++DNLDGGGVRVTCFSEAINDVPIHFQIICLSKQIY+WIGCNSAK GNLYAAAPTRPNNTVSVTS+LGGSSDNTGS+MA
Subjt:  MLYQGQISKEEQPLASPSSSNNDDNLDGGGVRVTCFSEAINDVPIHFQIICLSKQIYVWIGCNSAKLGNLYAAAPTRPNNTVSVTSILGGSSDNTGSTMA

Query:  RRLVLFFNIITNTLVPPFLVLKTGLNIILASNIPKNSPMIEVAAEKILVQKLATLGHIRPKSEG
        RR                LVLKTGLNIILASNIPKNSPMIEVAAEK+LVQKL TLG+IRPKSEG
Subjt:  RRLVLFFNIITNTLVPPFLVLKTGLNIILASNIPKNSPMIEVAAEKILVQKLATLGHIRPKSEG

A0A6J1GVJ0 proteasome assembly chaperone 4

7.8e-62

79.04

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Query:  MLYQGQISKEEQPLASPSSSNNDD-NLDGGGVRVTCFSEAINDVPIHFQIICLSKQIYVWIGCNSAKLGNLYAAAPTRPNNTVSVTSILGGSSDNTGSTM
        ML+Q QISKEEQ LA PSSSNNDD +LDGGG++VTCFSEAINDVPIHFQII L KQIY WIGCNSAK GNLYAAAPTRPNNTVSVTS+LGGSSDNTGSTM
Subjt:  MLYQGQISKEEQPLASPSSSNNDD-NLDGGGVRVTCFSEAINDVPIHFQIICLSKQIYVWIGCNSAKLGNLYAAAPTRPNNTVSVTSILGGSSDNTGSTM

Query:  ARRLVLFFNIITNTLVPPFLVLKTGLNIILASNIPKNSPMIEVAAEKILVQKLATLGHIRPKSEGPS
        ARR                LVLKTGLNI+LASNIPKNSP+IEVAAEK+LVQKL +LG IRPKSEGPS
Subjt:  ARRLVLFFNIITNTLVPPFLVLKTGLNIILASNIPKNSPMIEVAAEKILVQKLATLGHIRPKSEGPS

A0A6J1IXU6 proteasome assembly chaperone 4

6.0e-62

79.04

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Query:  MLYQGQISKEEQPLASPSSSNNDD-NLDGGGVRVTCFSEAINDVPIHFQIICLSKQIYVWIGCNSAKLGNLYAAAPTRPNNTVSVTSILGGSSDNTGSTM
        MLYQ QISKEEQ LASPSSSNNDD +LDGGG++VTCFSEAINDVPIHFQII L KQIY WIGCNSAK GNLYAAAPTRPNN VSVTS+LGGSSDNTGS+M
Subjt:  MLYQGQISKEEQPLASPSSSNNDD-NLDGGGVRVTCFSEAINDVPIHFQIICLSKQIYVWIGCNSAKLGNLYAAAPTRPNNTVSVTSILGGSSDNTGSTM

Query:  ARRLVLFFNIITNTLVPPFLVLKTGLNIILASNIPKNSPMIEVAAEKILVQKLATLGHIRPKSEGPS
        ARR                LVLKTGLNI+LASNIPKNSP+IEVAAEK+LVQKL +LG IRPKSEGPS
Subjt:  ARRLVLFFNIITNTLVPPFLVLKTGLNIILASNIPKNSPMIEVAAEKILVQKLATLGHIRPKSEGPS

SwissProt top hits

e value

%identity

Alignment

Q5JS54 Proteasome assembly chaperone 4

5.5e-04

32.89

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Query:  GGGVRVTCFSEAINDVPIHFQIICLSKQIYVWIGCNSAKLGNLYAAAPTRPNNTVSVTSILGGSSDNTGSTMARRL
        GG V +  FS  + +  +HF ++ L+  +++W+G  +  L NL  A  +R ++    TS+LG +SD T + +A+RL
Subjt:  GGGVRVTCFSEAINDVPIHFQIICLSKQIYVWIGCNSAKLGNLYAAAPTRPNNTVSVTSILGGSSDNTGSTMARRL

Arabidopsis top hits

e value

%identity

Alignment

AT1G48170.1 unknown protein

4.4e-41

58.11

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Query:  LASPSSSNNDDNLDGGGVRVTCFSEAINDVPIHFQIICLSKQIYVWIGCNSAKLGNLYAAAPTRPNNTVSVTSILGGSSDNTGSTMARRLVLFFNIITNT
        +A     ++D   DG GV+V+CF+E  +DV I FQII L+KQIYVW+GCNSAK G+LYAAA TRP+NTVSVTS+LGG+SDNTGS +ARR           
Subjt:  LASPSSSNNDDNLDGGGVRVTCFSEAINDVPIHFQIICLSKQIYVWIGCNSAKLGNLYAAAPTRPNNTVSVTSILGGSSDNTGSTMARRLVLFFNIITNT

Query:  LVPPFLVLKTGLNIILASNIPKNSPMIEVAAEKILVQKLATLGHIRPK
             LVLKTGLNIILA NIPKN+P++E  AEK+L++KL  LG+   K
Subjt:  LVPPFLVLKTGLNIILASNIPKNSPMIEVAAEKILVQKLATLGHIRPK

Sequences

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CDS sequence

Show/hide CDS sequence

ATGCTATATCAAGGTCAAATCTCAAAAGAAGAACAGCCACTTGCTAGTCCATCAAGTAGCAACAACGATGACAACCTTGATGGTGGTGGGGTTCGGGTTACTTGCTTCAG
TGAAGCTATAAATGACGTCCCCATCCATTTTCAGATTATATGTCTCTCCAAACAGATATATGTATGGATTGGTTGCAATTCTGCAAAACTTGGAAATTTGTATGCAGCTG
CCCCCACACGGCCTAACAATACGGTGAGTGTTACTTCCATACTTGGTGGTTCATCTGATAATACAGGATCTACCATGGCACGTCGATTAGTCCTATTCTTCAATATTATC
ACTAATACGCTTGTTCCTCCTTTCCTAGTGTTAAAAACTGGTCTAAATATCATCTTGGCTAGCAATATTCCAAAAAACAGCCCCATGATCGAGGTAGCAGCTGAAAAAAT
ATTAGTGCAAAAGCTGGCCACTTTAGGGCACATTAGGCCTAAATCAGAAGGGCCATCTAGATAA

mRNA sequence

Show/hide mRNA sequence

TTGAGAGTGTAATTACCATATTTCACGGGTAATTTTAGCAATTTGCCCCATTCATTAATATTCGCTATCGAGCCAGCCGCTCACCGTTCGTCGTCGGGTTCTCATCTCAC
AGCCTTACCATCGTTCCTTTTCTGGCAACGACGCCAACCGTTCGCCGTTCGGTTGGGGTTGGTGTTCTTGAGCGTTTAGGGGTTTGGAGAAGAAGAAGTTAGTTTCTTTG
TTTAGGTTGATAAAATGCTATATCAAGGTCAAATCTCAAAAGAAGAACAGCCACTTGCTAGTCCATCAAGTAGCAACAACGATGACAACCTTGATGGTGGTGGGGTTCGG
GTTACTTGCTTCAGTGAAGCTATAAATGACGTCCCCATCCATTTTCAGATTATATGTCTCTCCAAACAGATATATGTATGGATTGGTTGCAATTCTGCAAAACTTGGAAA
TTTGTATGCAGCTGCCCCCACACGGCCTAACAATACGGTGAGTGTTACTTCCATACTTGGTGGTTCATCTGATAATACAGGATCTACCATGGCACGTCGATTAGTCCTAT
TCTTCAATATTATCACTAATACGCTTGTTCCTCCTTTCCTAGTGTTAAAAACTGGTCTAAATATCATCTTGGCTAGCAATATTCCAAAAAACAGCCCCATGATCGAGGTA
GCAGCTGAAAAAATATTAGTGCAAAAGCTGGCCACTTTAGGGCACATTAGGCCTAAATCAGAAGGGCCATCTAGATAATTGGTACTGATGATTAGTCTTCTTTGCAAGAG
CCAAAGAGGCATTTGTTACTCTGGTTCAAAGAGGCATTTGCTACTCTGGTTATGGTAGCTGCTTTCTTCTCTGCAACCTTGTGACTTGAATATAGGCTAGGACTTTGGAG
GAGAATATCCCCAAACAAACCGCCTATCAAGGTACTCAATGAGGTTCTCTTTTACTTCATCCTGCTTAGATATTGGTTAAGAACATTATTCATTTGTCGTTATAATATTG
GATAAATCAATAGCAAAATACAAAATGAAGGTGTAAATATGTTGTACATTTATTTGTTTAATTTCTCATTGGAAGAAGAATTTCGAGAATGAGTTACATTAAGGGAAAAA
AATTCACCCCGATGTTCGACTCGTGAGTTGATCTCTATGCATATAGATGTATGTCGTATTCTTCGTACACCCTTGTATTTTTTTTATTTTTTTTCAAAAAGCGTGGTTAC
CAAAAAAAA

Protein sequence

Show/hide protein sequence

MLYQGQISKEEQPLASPSSSNNDDNLDGGGVRVTCFSEAINDVPIHFQIICLSKQIYVWIGCNSAKLGNLYAAAPTRPNNTVSVTSILGGSSDNTGSTMARRLVLFFNII
TNTLVPPFLVLKTGLNIILASNIPKNSPMIEVAAEKILVQKLATLGHIRPKSEGPSR

Lsi01G015060 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome