; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi01G015330 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G015330
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationchr01:13449776..13452846
RNA-Seq ExpressionLsi01G015330
SyntenyLsi01G015330
Gene Ontology termsGO:0009416 - response to light stimulus (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016168 - chlorophyll binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147887.1 chlorophyll a-b binding protein CP29.1, chloroplastic [Cucumis sativus]5.0e-15697.54Show/hide
Query:  MATAAATSSFIGTRLAELRPSSGRVQARFGFGKKKSPAKKSPSSKTIPDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNV
        MATAAATSSF+GTRLAE+ PSSGRVQARFGFGKKKSP KKSPSSK I DRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNV
Subjt:  MATAAATSSFIGTRLAELRPSSGRVQARFGFGKKKSPAKKSPSSKTIPDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNV

Query:  AGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEGLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQ
        AGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVE LTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQ
Subjt:  AGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEGLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQ

Query:  RNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
        RNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
Subjt:  RNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS

XP_008449241.1 PREDICTED: chlorophyll a-b binding protein CP29.1, chloroplastic-like [Cucumis melo]8.6e-15697.54Show/hide
Query:  MATAAATSSFIGTRLAELRPSSGRVQARFGFGKKKSPAKKSPSSKTIPDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNV
        MATAAATSSFIGTRLAE+ PSSGRVQARFGFGKKKSP KKSPSSK I DRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNV
Subjt:  MATAAATSSFIGTRLAELRPSSGRVQARFGFGKKKSPAKKSPSSKTIPDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNV

Query:  AGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEGLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQ
        AGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVE LTGVTWQDAGKVELVEGSSYLGQPLPFS+TTLIWIEVLVIGYIEFQ
Subjt:  AGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEGLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQ

Query:  RNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
        RNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
Subjt:  RNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS

XP_022950626.1 chlorophyll a-b binding protein CP29.1, chloroplastic-like [Cucurbita moschata]3.3e-15596.11Show/hide
Query:  ATAAATSSFIGTRLAELRPSSGRVQARFGFGKKKSPAKKSPSSKTIPDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA
        ATAAATSSFIGTRL ++RPSS RVQARFGFGKKK+PAKKSPSSKTI DRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA
Subjt:  ATAAATSSFIGTRLAELRPSSGRVQARFGFGKKKSPAKKSPSSKTIPDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA

Query:  GDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEGLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQR
        GDIIGTRFESA+VKSTPFQPY+EVFGLQRFRECELIHGRWAMLATLGAL+VEGLTG+TWQDAGKVELVEGSSYLGQPLPFS+TTLIWIEVLVIGYIEFQR
Subjt:  GDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEGLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQR

Query:  NAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
        NAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
Subjt:  NAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS

XP_022978220.1 chlorophyll a-b binding protein CP29.1, chloroplastic-like [Cucurbita maxima]1.5e-15596.11Show/hide
Query:  ATAAATSSFIGTRLAELRPSSGRVQARFGFGKKKSPAKKSPSSKTIPDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA
        ATAAATSSFIGTRL ++RPSSGRVQARFGFGKKK+PAKKSPSSKTI DRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA
Subjt:  ATAAATSSFIGTRLAELRPSSGRVQARFGFGKKKSPAKKSPSSKTIPDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA

Query:  GDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEGLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQR
        GDIIGTRFE+A+VKSTPFQPY+EVFGLQRFRECELIHGRWAMLATLGAL+VEGLTG+TWQDAGKVELVEGSSYLGQPLPFS+TTLIWIEVLVIGYIEFQR
Subjt:  GDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEGLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQR

Query:  NAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
        NAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
Subjt:  NAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS

XP_038882769.1 chlorophyll a-b binding protein CP29.1, chloroplastic-like [Benincasa hispida]5.9e-15798.24Show/hide
Query:  MATAAATSSFIGTRLAELRPSSGRVQARFGFGKKKSPAKKSPSSKTIPDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNV
        MATAAATSSFIGTRLAELRP SGRVQARFGFGKKKSP KKSPSSKTI DRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNV
Subjt:  MATAAATSSFIGTRLAELRPSSGRVQARFGFGKKKSPAKKSPSSKTIPDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNV

Query:  AGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEGLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQ
        AGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVE LTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQ
Subjt:  AGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEGLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQ

Query:  RNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
        RNAELDPEKRLYPGGKFFDPLGLAEDPEKK VLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
Subjt:  RNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS

TrEMBL top hitse value%identityAlignment
A0A0A0KXI3 Chlorophyll a-b binding protein, chloroplastic2.4e-15697.54Show/hide
Query:  MATAAATSSFIGTRLAELRPSSGRVQARFGFGKKKSPAKKSPSSKTIPDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNV
        MATAAATSSF+GTRLAE+ PSSGRVQARFGFGKKKSP KKSPSSK I DRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNV
Subjt:  MATAAATSSFIGTRLAELRPSSGRVQARFGFGKKKSPAKKSPSSKTIPDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNV

Query:  AGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEGLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQ
        AGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVE LTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQ
Subjt:  AGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEGLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQ

Query:  RNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
        RNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
Subjt:  RNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS

A0A1S3BMH8 Chlorophyll a-b binding protein, chloroplastic4.1e-15697.54Show/hide
Query:  MATAAATSSFIGTRLAELRPSSGRVQARFGFGKKKSPAKKSPSSKTIPDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNV
        MATAAATSSFIGTRLAE+ PSSGRVQARFGFGKKKSP KKSPSSK I DRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNV
Subjt:  MATAAATSSFIGTRLAELRPSSGRVQARFGFGKKKSPAKKSPSSKTIPDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNV

Query:  AGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEGLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQ
        AGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVE LTGVTWQDAGKVELVEGSSYLGQPLPFS+TTLIWIEVLVIGYIEFQ
Subjt:  AGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEGLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQ

Query:  RNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
        RNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
Subjt:  RNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS

A0A5D3BBB3 Chlorophyll a-b binding protein, chloroplastic4.1e-15697.54Show/hide
Query:  MATAAATSSFIGTRLAELRPSSGRVQARFGFGKKKSPAKKSPSSKTIPDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNV
        MATAAATSSFIGTRLAE+ PSSGRVQARFGFGKKKSP KKSPSSK I DRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNV
Subjt:  MATAAATSSFIGTRLAELRPSSGRVQARFGFGKKKSPAKKSPSSKTIPDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNV

Query:  AGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEGLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQ
        AGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVE LTGVTWQDAGKVELVEGSSYLGQPLPFS+TTLIWIEVLVIGYIEFQ
Subjt:  AGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEGLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQ

Query:  RNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
        RNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
Subjt:  RNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS

A0A6J1GFC4 Chlorophyll a-b binding protein, chloroplastic1.6e-15596.11Show/hide
Query:  ATAAATSSFIGTRLAELRPSSGRVQARFGFGKKKSPAKKSPSSKTIPDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA
        ATAAATSSFIGTRL ++RPSS RVQARFGFGKKK+PAKKSPSSKTI DRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA
Subjt:  ATAAATSSFIGTRLAELRPSSGRVQARFGFGKKKSPAKKSPSSKTIPDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA

Query:  GDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEGLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQR
        GDIIGTRFESA+VKSTPFQPY+EVFGLQRFRECELIHGRWAMLATLGAL+VEGLTG+TWQDAGKVELVEGSSYLGQPLPFS+TTLIWIEVLVIGYIEFQR
Subjt:  GDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEGLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQR

Query:  NAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
        NAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
Subjt:  NAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS

A0A6J1IPG0 Chlorophyll a-b binding protein, chloroplastic7.1e-15696.11Show/hide
Query:  ATAAATSSFIGTRLAELRPSSGRVQARFGFGKKKSPAKKSPSSKTIPDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA
        ATAAATSSFIGTRL ++RPSSGRVQARFGFGKKK+PAKKSPSSKTI DRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA
Subjt:  ATAAATSSFIGTRLAELRPSSGRVQARFGFGKKKSPAKKSPSSKTIPDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA

Query:  GDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEGLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQR
        GDIIGTRFE+A+VKSTPFQPY+EVFGLQRFRECELIHGRWAMLATLGAL+VEGLTG+TWQDAGKVELVEGSSYLGQPLPFS+TTLIWIEVLVIGYIEFQR
Subjt:  GDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEGLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQR

Query:  NAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
        NAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
Subjt:  NAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS

SwissProt top hitse value%identityAlignment
Q01667 Chlorophyll a-b binding protein 6, chloroplastic6.8e-3941.63Show/hide
Query:  WFPGAKAPEWLDGSLVGDYGFDPFGLGK-PAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALS
        W PG   P +LDGS  GD+GFDP GLG+ PA                                             L+R++E ELIH RWAMLA  G L 
Subjt:  WFPGAKAPEWLDGSLVGDYGFDPFGLGK-PAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALS

Query:  VEGLTGVTWQDAGKVELVEG--SSYLGQPLPF-SITTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAF
         E L    W  A +   + G  ++YLG P+P+ ++ T++ IE L I ++E QR+ E DPEK+ YPGG  FDPLG ++DP+K   L++ EIK+ RLA++AF
Subjt:  VEGLTGVTWQDAGKVELVEG--SSYLGQPLPF-SITTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAF

Query:  LGFAV-QAAVTGKGPLNNWATHLSDPLHTTIID
        +GF V Q+A  G GPL N ATHL+DP H  I D
Subjt:  LGFAV-QAAVTGKGPLNNWATHLSDPLHTTIID

Q07473 Chlorophyll a-b binding protein CP29.1, chloroplastic2.7e-13683.8Show/hide
Query:  ATAAATSSFIGTRLAE-LRPSSGRVQARFGFGKKKSPAKKSPSSKTIPDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNV
        A AAA SS +GTR+A  + P SGR  A FGFGKKK+  KKS       DRPLW+PGA +P+WLDGSLVGDYGFDPFGLGKPAEYLQ+D+DSLDQNLAKN+
Subjt:  ATAAATSSFIGTRLAE-LRPSSGRVQARFGFGKKKSPAKKSPSSKTIPDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNV

Query:  AGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEGLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQ
        AGD+IGTR E+A+ KSTPFQPY+EVFG+QRFRECELIHGRWAMLATLGALSVE LTGVTWQDAGKVELV+GSSYLGQPLPFSI+TLIWIEVLVIGYIEFQ
Subjt:  AGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEGLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQ

Query:  RNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
        RNAELD EKRLYPGGKFFDPLGLA DPEK A LQLAEIKHARLAMVAFLGFAVQAA TGKGPLNNWATHLSDPLHTTIID FSS
Subjt:  RNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS

Q93WD2 Chlorophyll a-b binding protein CP291.1e-6558.67Show/hide
Query:  LWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTP--------FQPYTEVFGLQRFRECELIHGRWAM
        LW P    PEWLDGSL GD GFDP GL KP+E++   +D  DQN AKN  G +       A V++TP          PY+EVFGL RFRECELIHGRWAM
Subjt:  LWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTP--------FQPYTEVFGLQRFRECELIHGRWAM

Query:  LATLGALSVEGLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAV-LQLAEIKHAR
        LA LGAL  E  TGV+W +AGKVEL +G+SY G  LPFSIT LIWIEV+++G  EF RN+E +PEKR YPGG  FDPL LA + E++A  L+ AEIKHAR
Subjt:  LATLGALSVEGLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAV-LQLAEIKHAR

Query:  LAMVAFLGFAVQAAVTGKGPLNNWA
        LAMV+F G+ VQA  TG+G L + A
Subjt:  LAMVAFLGFAVQAAVTGKGPLNNWA

Q9S7W1 Chlorophyll a-b binding protein CP29.3, chloroplastic1.1e-11375.93Show/hide
Query:  TAAATSSFIGTRLAELRPSSGRVQARFG--FGKKK--SPAKKSPSSKTIPDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAK
        TAAA S   G R+ + RP +GRVQARFG  FGKKK   P KKS   +   DR +WFPGA  PEWLDGS++GD GFDPFGLGKPAEYLQYD D LDQNLAK
Subjt:  TAAATSSFIGTRLAELRPSSGRVQARFG--FGKKK--SPAKKSPSSKTIPDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAK

Query:  NVAGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEGLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIE
        NVAGDIIG   ES+E+K TPFQPYTEVFG+QRFRECELIHGRWAML TLGA++VE LTG+ WQDAGKVELVEGSSYLGQPLPFS+TTLIWIEVLV+GYIE
Subjt:  NVAGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEGLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIE

Query:  FQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWAT
        FQRN+ELDPEKR+YPGG +FDPLGLA DPEK   L+LAEIKH+RLAMVAFL FA+QAA TGKGP++  AT
Subjt:  FQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWAT

Q9XF88 Chlorophyll a-b binding protein CP29.2, chloroplastic3.1e-13282.04Show/hide
Query:  ATAAATSSFIGTR-LAELRPSSGRVQARFGFGKKKSPAKKSPSSKTIPDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNV
        +TAAA SS +GTR ++++  +S R  ARFGFG KK+  KK+ +   I DRPLWFPGAK+PE+LDGSLVGDYGFDPFGLGKPAEYLQ+DLDSLDQNLAKN+
Subjt:  ATAAATSSFIGTR-LAELRPSSGRVQARFGFGKKKSPAKKSPSSKTIPDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNV

Query:  AGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEGLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQ
         G++IGTR E+ + KSTPFQPY+EVFGLQRFRECELIHGRWAMLATLGA++VE LTGVTWQDAGKVELV+GSSYLGQPLPFSI+TLIWIEVLVIGYIEFQ
Subjt:  AGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEGLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQ

Query:  RNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
        RNAELD EKRLYPGGKFFDPLGLA DP KKA LQLAEIKHARLAMV FLGFAVQAA TGKGPLNNWATHLSDPLHTTIID FSS
Subjt:  RNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS

Arabidopsis top hitse value%identityAlignment
AT2G40100.1 light harvesting complex photosystem II7.8e-11575.93Show/hide
Query:  TAAATSSFIGTRLAELRPSSGRVQARFG--FGKKK--SPAKKSPSSKTIPDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAK
        TAAA S   G R+ + RP +GRVQARFG  FGKKK   P KKS   +   DR +WFPGA  PEWLDGS++GD GFDPFGLGKPAEYLQYD D LDQNLAK
Subjt:  TAAATSSFIGTRLAELRPSSGRVQARFG--FGKKK--SPAKKSPSSKTIPDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAK

Query:  NVAGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEGLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIE
        NVAGDIIG   ES+E+K TPFQPYTEVFG+QRFRECELIHGRWAML TLGA++VE LTG+ WQDAGKVELVEGSSYLGQPLPFS+TTLIWIEVLV+GYIE
Subjt:  NVAGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEGLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIE

Query:  FQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWAT
        FQRN+ELDPEKR+YPGG +FDPLGLA DPEK   L+LAEIKH+RLAMVAFL FA+QAA TGKGP++  AT
Subjt:  FQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWAT

AT2G40100.2 light harvesting complex photosystem II1.4e-6672.78Show/hide
Query:  TAAATSSFIGTRLAELRPSSGRVQARFG--FGKKK--SPAKKSPSSKTIPDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAK
        TAAA S   G R+ + RP +GRVQARFG  FGKKK   P KKS   +   DR +WFPGA  PEWLDGS++GD GFDPFGLGKPAEYLQYD D LDQNLAK
Subjt:  TAAATSSFIGTRLAELRPSSGRVQARFG--FGKKK--SPAKKSPSSKTIPDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAK

Query:  NVAGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEGLTGVTWQDAGKVE
        NVAGDIIG   ES+E+K TPFQPYTEVFG+QRFRECELIHGRWAML TLGA++VE LTG+ WQDAGKVE
Subjt:  NVAGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEGLTGVTWQDAGKVE

AT3G08940.1 light harvesting complex photosystem II1.9e-6871.27Show/hide
Query:  ATAAATSSFIGTR-LAELRPSSGRVQARFGFGKKKSPAKKSPSSKTIPDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNV
        +TAAA SS +GTR ++++  +S R  ARFGFG KK+  KK+ +   I DRPLWFPGAK+PE+LDGSLVGDYGFDPFGLGKPAEYLQ+DLDSLDQNLAKN+
Subjt:  ATAAATSSFIGTR-LAELRPSSGRVQARFGFGKKKSPAKKSPSSKTIPDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNV

Query:  AGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEGLTGVTWQDAGKVELVEGSSYLGQPLPF
         G++IGTR E+ + KSTPFQPY+EVFGLQRFRECELIHGRWAMLATLGA++VE LTGVTWQDAGKV  +  SS L   L F
Subjt:  AGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEGLTGVTWQDAGKVELVEGSSYLGQPLPF

AT3G08940.2 light harvesting complex photosystem II2.2e-13382.04Show/hide
Query:  ATAAATSSFIGTR-LAELRPSSGRVQARFGFGKKKSPAKKSPSSKTIPDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNV
        +TAAA SS +GTR ++++  +S R  ARFGFG KK+  KK+ +   I DRPLWFPGAK+PE+LDGSLVGDYGFDPFGLGKPAEYLQ+DLDSLDQNLAKN+
Subjt:  ATAAATSSFIGTR-LAELRPSSGRVQARFGFGKKKSPAKKSPSSKTIPDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNV

Query:  AGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEGLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQ
         G++IGTR E+ + KSTPFQPY+EVFGLQRFRECELIHGRWAMLATLGA++VE LTGVTWQDAGKVELV+GSSYLGQPLPFSI+TLIWIEVLVIGYIEFQ
Subjt:  AGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEGLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQ

Query:  RNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
        RNAELD EKRLYPGGKFFDPLGLA DP KKA LQLAEIKHARLAMV FLGFAVQAA TGKGPLNNWATHLSDPLHTTIID FSS
Subjt:  RNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS

AT5G01530.1 light harvesting complex photosystem II1.9e-13783.8Show/hide
Query:  ATAAATSSFIGTRLAE-LRPSSGRVQARFGFGKKKSPAKKSPSSKTIPDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNV
        A AAA SS +GTR+A  + P SGR  A FGFGKKK+  KKS       DRPLW+PGA +P+WLDGSLVGDYGFDPFGLGKPAEYLQ+D+DSLDQNLAKN+
Subjt:  ATAAATSSFIGTRLAE-LRPSSGRVQARFGFGKKKSPAKKSPSSKTIPDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNV

Query:  AGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEGLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQ
        AGD+IGTR E+A+ KSTPFQPY+EVFG+QRFRECELIHGRWAMLATLGALSVE LTGVTWQDAGKVELV+GSSYLGQPLPFSI+TLIWIEVLVIGYIEFQ
Subjt:  AGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEGLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQ

Query:  RNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
        RNAELD EKRLYPGGKFFDPLGLA DPEK A LQLAEIKHARLAMVAFLGFAVQAA TGKGPLNNWATHLSDPLHTTIID FSS
Subjt:  RNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAACTGCCGCCGCAACCTCCTCCTTCATCGGAACACGCCTCGCCGAATTGCGGCCGAGTTCCGGCCGAGTCCAAGCCCGATTCGGATTCGGGAAGAAAAAGAGTCC
GGCGAAGAAATCGCCGTCTTCAAAGACGATACCCGACCGGCCGCTGTGGTTTCCAGGAGCCAAAGCGCCGGAATGGCTGGACGGAAGCTTGGTAGGGGACTACGGATTCG
ATCCGTTCGGGTTGGGGAAACCGGCGGAGTATTTGCAGTATGATTTGGACTCGTTGGACCAGAACTTGGCGAAGAATGTGGCGGGAGACATAATCGGGACGAGATTTGAG
AGTGCGGAAGTGAAATCGACGCCGTTTCAGCCGTACACGGAGGTTTTCGGATTGCAGAGGTTCCGTGAGTGCGAGCTGATCCATGGAAGGTGGGCAATGCTGGCCACACT
CGGTGCTCTCTCTGTTGAAGGGCTCACCGGTGTCACGTGGCAAGACGCCGGAAAAGTAGAATTAGTGGAAGGTTCGTCCTACCTAGGGCAACCACTTCCCTTCTCCATCA
CCACATTGATATGGATCGAAGTTCTAGTGATTGGATACATTGAGTTCCAAAGGAATGCCGAGCTCGACCCAGAGAAGAGGTTGTACCCAGGAGGCAAGTTTTTCGACCCC
TTGGGCTTGGCTGAGGATCCAGAAAAGAAAGCCGTGCTACAATTGGCCGAGATCAAGCACGCTCGCCTAGCCATGGTTGCCTTCCTCGGGTTCGCGGTTCAGGCTGCTGT
CACTGGCAAAGGCCCACTCAACAACTGGGCTACCCATCTTAGTGACCCTCTCCACACCACTATTATTGACAACTTCTCTTCTTAA
mRNA sequenceShow/hide mRNA sequence
CCTCAACCACAAACTTCGCAAACAAAATCGAGTGAAACGACGACGCTTTGACCCCACCGTCCAGTACGACGGGATAAGGCAGAGATAAGGCCAGGACGCACAGAAGCCGT
CAGATGGATTCGTCCCATAATCAAACGGACACAAAACCACCACAACAGATTATGTGGCAATCGCCGATCACACTTCCCTTTTCTCAACCACATAATAACCCAACCAAAAT
CCCTAATTCCATCTCACACTCTTCAATTCCTCTCTCAACTCCTCGTCGTCGTCGTAATGGCAACTGCCGCCGCAACCTCCTCCTTCATCGGAACACGCCTCGCCGAATTG
CGGCCGAGTTCCGGCCGAGTCCAAGCCCGATTCGGATTCGGGAAGAAAAAGAGTCCGGCGAAGAAATCGCCGTCTTCAAAGACGATACCCGACCGGCCGCTGTGGTTTCC
AGGAGCCAAAGCGCCGGAATGGCTGGACGGAAGCTTGGTAGGGGACTACGGATTCGATCCGTTCGGGTTGGGGAAACCGGCGGAGTATTTGCAGTATGATTTGGACTCGT
TGGACCAGAACTTGGCGAAGAATGTGGCGGGAGACATAATCGGGACGAGATTTGAGAGTGCGGAAGTGAAATCGACGCCGTTTCAGCCGTACACGGAGGTTTTCGGATTG
CAGAGGTTCCGTGAGTGCGAGCTGATCCATGGAAGGTGGGCAATGCTGGCCACACTCGGTGCTCTCTCTGTTGAAGGGCTCACCGGTGTCACGTGGCAAGACGCCGGAAA
AGTAGAATTAGTGGAAGGTTCGTCCTACCTAGGGCAACCACTTCCCTTCTCCATCACCACATTGATATGGATCGAAGTTCTAGTGATTGGATACATTGAGTTCCAAAGGA
ATGCCGAGCTCGACCCAGAGAAGAGGTTGTACCCAGGAGGCAAGTTTTTCGACCCCTTGGGCTTGGCTGAGGATCCAGAAAAGAAAGCCGTGCTACAATTGGCCGAGATC
AAGCACGCTCGCCTAGCCATGGTTGCCTTCCTCGGGTTCGCGGTTCAGGCTGCTGTCACTGGCAAAGGCCCACTCAACAACTGGGCTACCCATCTTAGTGACCCTCTCCA
CACCACTATTATTGACAACTTCTCTTCTTAAGCTCCTCTTTTTTCTCGAGTACTCGTGTTGATTATTGTATTTCTTTCTAGTTTGTATAAAAAACTTGACCGAGTAATGT
GATCCTGAGCTGTAAGTACTTTAATTCGAGATTCGTATGTGAAATTATATATCGTGCTACGACACAAATCAAAAGTGTTATTAATTTCGTTTTGGAACTTTGTTGAGGTA
TTTTTTAATCATCATTGAGGTGATTGATTTTATAACGTCAAATTTTTATGGATTGAAAAAATTGTATAGATTATTTGAGAATTAGAATTATAGTATGATCAAGGTTTAAA
A
Protein sequenceShow/hide protein sequence
MATAAATSSFIGTRLAELRPSSGRVQARFGFGKKKSPAKKSPSSKTIPDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFE
SAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEGLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDP
LGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS