CuGenDBv2

Gene ID	Lsi01G015340
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	Protein yippee-like
Genome location	chr01:13453458..13457367
RNA-Seq Expression	Lsi01G015340
Synteny	Lsi01G015340
Gene Ontology terms	GO:0000151 - ubiquitin ligase complex (cellular component) GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR004910 - Yippee/Mis18/Cereblon IPR034751 - Yippee domain IPR039058 - Yippee family

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004147886.1 protein yippee-like [Cucumis sativus]

1.6e-64

93.7

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Query:  MGRLFFITLEGNFYSCKHCKTHLALSKDIISRTFHCRHGRAYLFNNVVNVTVGEQEERMMITGLHTVVDIFCVGCGSILGWKYEVAYDKSQKYKEGKYIL
        MGRLF ITL+GNFYSCKHCKTHLALSKDIISRTF+CRHGRAYLFNNVVNVTVGEQEERMMITGLHTVVDIFCVGCGSI+GWKYEVAYDKSQKYKEGKYIL
Subjt:  MGRLFFITLEGNFYSCKHCKTHLALSKDIISRTFHCRHGRAYLFNNVVNVTVGEQEERMMITGLHTVVDIFCVGCGSILGWKYEVAYDKSQKYKEGKYIL

Query:  EMFKVLGPDGNSYLASHDPQLAGSDGD
        EMFKVL PDG  YLASHDPQL GSDGD
Subjt:  EMFKVLGPDGNSYLASHDPQLAGSDGD

XP_016900459.1 PREDICTED: LOW QUALITY PROTEIN: protein yippee-like [Cucumis melo]

1.2e-64

92.25

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Query:  MGRLFFITLEGNFYSCKHCKTHLALSKDIISRTFHCRHGRAYLFNNVVNVTVGEQEERMMITGLHTVVDIFCVGCGSILGWKYEVAYDKSQKYKEGKYIL
        MGRLF + LEGNFYSCKHCKTHLALSKDIISRTF+CRHGRAYLFN+VVNV+VGEQEERMMITGLHTVVDIFCVGCGSI+GWKYEVAYDKSQKYKEGKYIL
Subjt:  MGRLFFITLEGNFYSCKHCKTHLALSKDIISRTFHCRHGRAYLFNNVVNVTVGEQEERMMITGLHTVVDIFCVGCGSILGWKYEVAYDKSQKYKEGKYIL

Query:  EMFKVLGPDGNSYLASHDPQLAGSDGDDA
        EMFKVLGPDG  YLASHDPQL GSDGDDA
Subjt:  EMFKVLGPDGNSYLASHDPQLAGSDGDDA

XP_022950878.1 protein yippee-like [Cucurbita moschata]

1.7e-63

89.92

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Query:  MGRLFFITLEGNFYSCKHCKTHLALSKDIISRTFHCRHGRAYLFNNVVNVTVGEQEERMMITGLHTVVDIFCVGCGSILGWKYEVAYDKSQKYKEGKYIL
        MGRL   TLEGNFYSCKHCKTHLAL +DIISRTFHCRHG+AYLFNN+VNVTVGE E+RM+ITGLHTVVDIFCVGCGSILGWKYE+A+DKSQKYKEGKYIL
Subjt:  MGRLFFITLEGNFYSCKHCKTHLALSKDIISRTFHCRHGRAYLFNNVVNVTVGEQEERMMITGLHTVVDIFCVGCGSILGWKYEVAYDKSQKYKEGKYIL

Query:  EMFKVLGPDGNSYLASHDPQLAGSDGDDA
        EM KVLGPDGNSYLASHDPQLAGSDGDDA
Subjt:  EMFKVLGPDGNSYLASHDPQLAGSDGDDA

XP_023543326.1 protein yippee-like [Cucurbita pepo subsp. pepo]

6.0e-64

90.7

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Query:  MGRLFFITLEGNFYSCKHCKTHLALSKDIISRTFHCRHGRAYLFNNVVNVTVGEQEERMMITGLHTVVDIFCVGCGSILGWKYEVAYDKSQKYKEGKYIL
        MGRL   TLEGNFYSCKHCKTHLAL KDIISRTFHCRHG+AYLFNN+VNVTVGE E+RM+ITGLHTVVDIFCVGCGSILGWKYE+A+DKSQKYKEGKYIL
Subjt:  MGRLFFITLEGNFYSCKHCKTHLALSKDIISRTFHCRHGRAYLFNNVVNVTVGEQEERMMITGLHTVVDIFCVGCGSILGWKYEVAYDKSQKYKEGKYIL

Query:  EMFKVLGPDGNSYLASHDPQLAGSDGDDA
        EM KVLGPDGNSYLASHDPQLAGSDGDDA
Subjt:  EMFKVLGPDGNSYLASHDPQLAGSDGDDA

XP_038883190.1 protein yippee-like [Benincasa hispida]

6.2e-69

99.22

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Query:  MGRLFFITLEGNFYSCKHCKTHLALSKDIISRTFHCRHGRAYLFNNVVNVTVGEQEERMMITGLHTVVDIFCVGCGSILGWKYEVAYDKSQKYKEGKYIL
        MGRLFFITLEGN YSCKHCKTHLALSKDIISRTFHCRHGRAYLFNNVVNVTVGEQEERMMITGLHTVVDIFCVGCGSILGWKYEVAYDKSQKYKEGKYIL
Subjt:  MGRLFFITLEGNFYSCKHCKTHLALSKDIISRTFHCRHGRAYLFNNVVNVTVGEQEERMMITGLHTVVDIFCVGCGSILGWKYEVAYDKSQKYKEGKYIL

Query:  EMFKVLGPDGNSYLASHDPQLAGSDGDDA
        EMFKVLGPDGNSYLASHDPQLAGSDGDDA
Subjt:  EMFKVLGPDGNSYLASHDPQLAGSDGDDA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L2L2 Protein yippee-like

7.6e-65

93.7

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Query:  MGRLFFITLEGNFYSCKHCKTHLALSKDIISRTFHCRHGRAYLFNNVVNVTVGEQEERMMITGLHTVVDIFCVGCGSILGWKYEVAYDKSQKYKEGKYIL
        MGRLF ITL+GNFYSCKHCKTHLALSKDIISRTF+CRHGRAYLFNNVVNVTVGEQEERMMITGLHTVVDIFCVGCGSI+GWKYEVAYDKSQKYKEGKYIL
Subjt:  MGRLFFITLEGNFYSCKHCKTHLALSKDIISRTFHCRHGRAYLFNNVVNVTVGEQEERMMITGLHTVVDIFCVGCGSILGWKYEVAYDKSQKYKEGKYIL

Query:  EMFKVLGPDGNSYLASHDPQLAGSDGD
        EMFKVL PDG  YLASHDPQL GSDGD
Subjt:  EMFKVLGPDGNSYLASHDPQLAGSDGD

A0A1S4DWV3 Protein yippee-like

5.8e-65

92.25

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Query:  MGRLFFITLEGNFYSCKHCKTHLALSKDIISRTFHCRHGRAYLFNNVVNVTVGEQEERMMITGLHTVVDIFCVGCGSILGWKYEVAYDKSQKYKEGKYIL
        MGRLF + LEGNFYSCKHCKTHLALSKDIISRTF+CRHGRAYLFN+VVNV+VGEQEERMMITGLHTVVDIFCVGCGSI+GWKYEVAYDKSQKYKEGKYIL
Subjt:  MGRLFFITLEGNFYSCKHCKTHLALSKDIISRTFHCRHGRAYLFNNVVNVTVGEQEERMMITGLHTVVDIFCVGCGSILGWKYEVAYDKSQKYKEGKYIL

Query:  EMFKVLGPDGNSYLASHDPQLAGSDGDDA
        EMFKVLGPDG  YLASHDPQL GSDGDDA
Subjt:  EMFKVLGPDGNSYLASHDPQLAGSDGDDA

A0A6J1DDY1 Protein yippee-like

2.1e-62

89.15

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Query:  MGRLFFITLEGNFYSCKHCKTHLALSKDIISRTFHCRHGRAYLFNNVVNVTVGEQEERMMITGLHTVVDIFCVGCGSILGWKYEVAYDKSQKYKEGKYIL
        MGRLF ITLEGN YSCKHCK HLALSKDIIS+TFHCRHGRAYLF+NVVNVT+GEQEERMMITGLHTVVDIFCVGCGSILGWKY+ AYDKSQKYKEGK+IL
Subjt:  MGRLFFITLEGNFYSCKHCKTHLALSKDIISRTFHCRHGRAYLFNNVVNVTVGEQEERMMITGLHTVVDIFCVGCGSILGWKYEVAYDKSQKYKEGKYIL

Query:  EMFKVLGPDGNSYLASHDPQLAGSDGDDA
        EMFKVL PDG+ Y+ASHD QLAGSDGDDA
Subjt:  EMFKVLGPDGNSYLASHDPQLAGSDGDDA

A0A6J1GG37 Protein yippee-like

8.4e-64

89.92

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Query:  MGRLFFITLEGNFYSCKHCKTHLALSKDIISRTFHCRHGRAYLFNNVVNVTVGEQEERMMITGLHTVVDIFCVGCGSILGWKYEVAYDKSQKYKEGKYIL
        MGRL   TLEGNFYSCKHCKTHLAL +DIISRTFHCRHG+AYLFNN+VNVTVGE E+RM+ITGLHTVVDIFCVGCGSILGWKYE+A+DKSQKYKEGKYIL
Subjt:  MGRLFFITLEGNFYSCKHCKTHLALSKDIISRTFHCRHGRAYLFNNVVNVTVGEQEERMMITGLHTVVDIFCVGCGSILGWKYEVAYDKSQKYKEGKYIL

Query:  EMFKVLGPDGNSYLASHDPQLAGSDGDDA
        EM KVLGPDGNSYLASHDPQLAGSDGDDA
Subjt:  EMFKVLGPDGNSYLASHDPQLAGSDGDDA

A0A6J1IPR3 Protein yippee-like

7.1e-63

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Query:  MGRLFFITLEGNFYSCKHCKTHLALSKDIISRTFHCRHGRAYLFNNVVNVTVGEQEERMMITGLHTVVDIFCVGCGSILGWKYEVAYDKSQKYKEGKYIL
        MGRL   TLEGNFYSCKHCKTHLAL KDIISRTFHCRHG+AYLFNN+VNVTVGE E+RM+ITGLHTVVDIFCVGCGSILGWKYE+A+DKSQKYKEGKYIL
Subjt:  MGRLFFITLEGNFYSCKHCKTHLALSKDIISRTFHCRHGRAYLFNNVVNVTVGEQEERMMITGLHTVVDIFCVGCGSILGWKYEVAYDKSQKYKEGKYIL

Query:  EMFKVLGPDGNSYLASHDPQLA-GSDGDDA
        EM KVLGPDGNSYLASHDPQLA GSDGDDA
Subjt:  EMFKVLGPDGNSYLASHDPQLA-GSDGDDA

SwissProt top hits

e value

%identity

Alignment

P59234 Protein yippee-like

5.4e-52

71.09

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Query:  MGRLFFITLEGNFYSCKHCKTHLALSKDIISRTFHCRHGRAYLFNNVVNVTVGEQEERMMITGLHTVVDIFCVGCGSILGWKYEVAYDKSQKYKEGKYIL
        MGRLF +TLEG  YSCKHC THLALS++I+S++FHC+HG+AYLF+ VVNVT GE E RMM+TG+HTV DIFCV CGSI+GWKYE A++KSQKYKEGK +L
Subjt:  MGRLFFITLEGNFYSCKHCKTHLALSKDIISRTFHCRHGRAYLFNNVVNVTVGEQEERMMITGLHTVVDIFCVGCGSILGWKYEVAYDKSQKYKEGKYIL

Query:  EMFKVLGPDGNSYLASHDPQLAGSDGDD
        E FK+ GPDG+ Y ASHD  +AGSD DD
Subjt:  EMFKVLGPDGNSYLASHDPQLAGSDGDD

Q9C777 Protein yippee-like At3g11230

2.2e-45

62.02

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Query:  MGRLFFITLEGNFYSCKHCKTHLALSKDIISRTFHCRHGRAYLFNNVVNVTVGEQEERMMITGLHTVVDIFCVGCGSILGWKYEVAYDKSQKYKEGKYIL
        MGRLF + LEG  YSCKHCKT+LAL  D++S++F  RHG+AYLF+ VVNV  G++E+RMM+TG+HTVVDI+CV CGS +GWKYE A++K+QKYKEGK +L
Subjt:  MGRLFFITLEGNFYSCKHCKTHLALSKDIISRTFHCRHGRAYLFNNVVNVTVGEQEERMMITGLHTVVDIFCVGCGSILGWKYEVAYDKSQKYKEGKYIL

Query:  EMFKVLGPDGNSYLASHDPQLAGSDGDDA
        E +KV GPDGN+Y  + + +   SD DDA
Subjt:  EMFKVLGPDGNSYLASHDPQLAGSDGDDA

Q9FN32 Protein yippee-like At5g53940

4.6e-35

51.16

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Query:  MGRLFFITLEGNFYSCKHCKTHLALSKDIISRTFHCRHGRAYLFNNVVNVTVGEQEERMMITGLHTVVDIFCVGCGSILGWKYEVAYDKSQKYKEGKYIL
        MGR+F + LEG  Y C+ C+THLAL  D++SR+FHCR G+AYLFN  VN+++G  EER+M++G+HTV DIFC  CG  +GWKYE A++K+QKYKEGK++L
Subjt:  MGRLFFITLEGNFYSCKHCKTHLALSKDIISRTFHCRHGRAYLFNNVVNVTVGEQEERMMITGLHTVVDIFCVGCGSILGWKYEVAYDKSQKYKEGKYIL

Query:  EMFKVLGPDGNSYLASHDPQLAGSDGDDA
        E  +++     S     D   + SD +D+
Subjt:  EMFKVLGPDGNSYLASHDPQLAGSDGDDA

Q9LY56 Protein yippee-like At3g55890

8.4e-45

65.12

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Query:  MGRLFFITLEGNFYSCKHCKTHLALSKDIISRTFHCRHGRAYLFNNVVNVTVGEQEERMMITGLHTVVDIFCVGCGSILGWKYEVAYDKSQKYKEGKYIL
        MGR+F + LEGN Y CK CKTHL+  +DI+S++F C++GRAYLFNNVVNV+VGE+E+RMMITGLH VVDIFCVGCGS +GWKYE A++KSQKYKEGK +L
Subjt:  MGRLFFITLEGNFYSCKHCKTHLALSKDIISRTFHCRHGRAYLFNNVVNVTVGEQEERMMITGLHTVVDIFCVGCGSILGWKYEVAYDKSQKYKEGKYIL

Query:  EMFKVLGPDGNSYLASHDPQLAGSDGDDA
        E++K+ GP        HD     SDGDDA
Subjt:  EMFKVLGPDGNSYLASHDPQLAGSDGDDA

Q9SR97 Protein yippee-like At3g08990

1.9e-49

68.75

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Query:  MGRLFFITLEGNFYSCKHCKTHLALSKDIISRTFHCRHGRAYLFNNVVNVTVGEQEERMMITGLHTVVDIFCVGCGSILGWKYEVAYDKSQKYKEGKYIL
        MGRLF I LEG  YSCK+C+TH A++ DIIS++FHC+HGRAYLF+NVVNVTVGE+E R+MITG HTV DIFCV CGS++GWKYE+AYDKSQKYKEGK+IL
Subjt:  MGRLFFITLEGNFYSCKHCKTHLALSKDIISRTFHCRHGRAYLFNNVVNVTVGEQEERMMITGLHTVVDIFCVGCGSILGWKYEVAYDKSQKYKEGKYIL

Query:  EMFKVLGPDGNSYLASHDPQLAGSDGDD
        E FKVLGP G  Y  + +  + GSD ++
Subjt:  EMFKVLGPDGNSYLASHDPQLAGSDGDD

Arabidopsis top hits

e value

%identity

Alignment

AT2G40110.1 Yippee family putative zinc-binding protein

4.7e-51

66.92

Show/hide

Query:  MGRLFFITLEGNFYSCKHCKTHLALSKDIISRTFHCRHGRAYLFNNVVNVTVGEQEERMMITGLHTVVDIFCVGCGSILGWKYEVAYDKSQKYKEGKYIL
        MGRLF + LEG  YSCKHCKTHLA  +DIIS++FHC+HG+AYLFN V NV++GE EER+M+TG HTV DIFCV CGSI+GWKYE A++K+QKYKEGK +L
Subjt:  MGRLFFITLEGNFYSCKHCKTHLALSKDIISRTFHCRHGRAYLFNNVVNVTVGEQEERMMITGLHTVVDIFCVGCGSILGWKYEVAYDKSQKYKEGKYIL

Query:  EMFKVLGPDGNSY-LASHDPQLAGSDGDDA
        E FK+ GPDG++Y ++SH   + GSD DDA
Subjt:  EMFKVLGPDGNSY-LASHDPQLAGSDGDDA

AT3G08990.1 Yippee family putative zinc-binding protein

1.4e-50

68.75

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Query:  MGRLFFITLEGNFYSCKHCKTHLALSKDIISRTFHCRHGRAYLFNNVVNVTVGEQEERMMITGLHTVVDIFCVGCGSILGWKYEVAYDKSQKYKEGKYIL
        MGRLF I LEG  YSCK+C+TH A++ DIIS++FHC+HGRAYLF+NVVNVTVGE+E R+MITG HTV DIFCV CGS++GWKYE+AYDKSQKYKEGK+IL
Subjt:  MGRLFFITLEGNFYSCKHCKTHLALSKDIISRTFHCRHGRAYLFNNVVNVTVGEQEERMMITGLHTVVDIFCVGCGSILGWKYEVAYDKSQKYKEGKYIL

Query:  EMFKVLGPDGNSYLASHDPQLAGSDGDD
        E FKVLGP G  Y  + +  + GSD ++
Subjt:  EMFKVLGPDGNSYLASHDPQLAGSDGDD

AT3G08990.2 Yippee family putative zinc-binding protein

1.4e-50

68.75

Show/hide

Query:  MGRLFFITLEGNFYSCKHCKTHLALSKDIISRTFHCRHGRAYLFNNVVNVTVGEQEERMMITGLHTVVDIFCVGCGSILGWKYEVAYDKSQKYKEGKYIL
        MGRLF I LEG  YSCK+C+TH A++ DIIS++FHC+HGRAYLF+NVVNVTVGE+E R+MITG HTV DIFCV CGS++GWKYE+AYDKSQKYKEGK+IL
Subjt:  MGRLFFITLEGNFYSCKHCKTHLALSKDIISRTFHCRHGRAYLFNNVVNVTVGEQEERMMITGLHTVVDIFCVGCGSILGWKYEVAYDKSQKYKEGKYIL

Query:  EMFKVLGPDGNSYLASHDPQLAGSDGDD
        E FKVLGP G  Y  + +  + GSD ++
Subjt:  EMFKVLGPDGNSYLASHDPQLAGSDGDD

AT3G11230.1 Yippee family putative zinc-binding protein

1.6e-46

62.02

Show/hide

Query:  MGRLFFITLEGNFYSCKHCKTHLALSKDIISRTFHCRHGRAYLFNNVVNVTVGEQEERMMITGLHTVVDIFCVGCGSILGWKYEVAYDKSQKYKEGKYIL
        MGRLF + LEG  YSCKHCKT+LAL  D++S++F  RHG+AYLF+ VVNV  G++E+RMM+TG+HTVVDI+CV CGS +GWKYE A++K+QKYKEGK +L
Subjt:  MGRLFFITLEGNFYSCKHCKTHLALSKDIISRTFHCRHGRAYLFNNVVNVTVGEQEERMMITGLHTVVDIFCVGCGSILGWKYEVAYDKSQKYKEGKYIL

Query:  EMFKVLGPDGNSYLASHDPQLAGSDGDDA
        E +KV GPDGN+Y  + + +   SD DDA
Subjt:  EMFKVLGPDGNSYLASHDPQLAGSDGDDA

AT3G11230.2 Yippee family putative zinc-binding protein

1.6e-46

62.02

Show/hide

Query:  MGRLFFITLEGNFYSCKHCKTHLALSKDIISRTFHCRHGRAYLFNNVVNVTVGEQEERMMITGLHTVVDIFCVGCGSILGWKYEVAYDKSQKYKEGKYIL
        MGRLF + LEG  YSCKHCKT+LAL  D++S++F  RHG+AYLF+ VVNV  G++E+RMM+TG+HTVVDI+CV CGS +GWKYE A++K+QKYKEGK +L
Subjt:  MGRLFFITLEGNFYSCKHCKTHLALSKDIISRTFHCRHGRAYLFNNVVNVTVGEQEERMMITGLHTVVDIFCVGCGSILGWKYEVAYDKSQKYKEGKYIL

Query:  EMFKVLGPDGNSYLASHDPQLAGSDGDDA
        E +KV GPDGN+Y  + + +   SD DDA
Subjt:  EMFKVLGPDGNSYLASHDPQLAGSDGDDA

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGGAAGGCTATTTTTTATTACTCTGGAAGGAAATTTTTATAGTTGCAAACACTGTAAAACTCATCTCGCCCTTTCTAAAGACATAATTTCAAGGACTTTTCATTGCAG
GCATGGGAGGGCTTACTTATTTAATAACGTTGTCAATGTCACAGTTGGGGAACAAGAAGAGCGGATGATGATCACAGGATTGCACACTGTTGTTGACATATTTTGTGTTG
GTTGTGGCTCAATTCTTGGTTGGAAATATGAGGTTGCCTATGACAAATCCCAAAAGTACAAGGAAGGAAAATATATCCTTGAAATGTTCAAGGTGTTGGGCCCTGATGGA
AACAGCTACTTAGCAAGTCATGATCCACAGCTTGCAGGAAGCGATGGTGACGATGCTTGA

mRNA sequence

Show/hide mRNA sequence

AAAAAACTGAAATTTCAATTTCAATTTCAATTTCGAACGCGTTTCGAATTTATAAATACTGGTATCGATCAAACTTTTTGTTTTTCGTTTTCGATCTCTTGTTGAATTCC
ATCTGCGACTGCCGGCGACGATCATCCGACTCTCATTCCGCTTCCTCTATTTCGTCAGTTTCAGCCTTCCCAGAATTTGCATTGTAAGGGAAGGAAATCGAGGATTGGTA
GAGATATTGCGGCAAGGAGAAGAGATGGGAAGGCTATTTTTTATTACTCTGGAAGGAAATTTTTATAGTTGCAAACACTGTAAAACTCATCTCGCCCTTTCTAAAGACAT
AATTTCAAGGACTTTTCATTGCAGGCATGGGAGGGCTTACTTATTTAATAACGTTGTCAATGTCACAGTTGGGGAACAAGAAGAGCGGATGATGATCACAGGATTGCACA
CTGTTGTTGACATATTTTGTGTTGGTTGTGGCTCAATTCTTGGTTGGAAATATGAGGTTGCCTATGACAAATCCCAAAAGTACAAGGAAGGAAAATATATCCTTGAAATG
TTCAAGGTGTTGGGCCCTGATGGAAACAGCTACTTAGCAAGTCATGATCCACAGCTTGCAGGAAGCGATGGTGACGATGCTTGATCTGCTGTCGAGTTTGAAAGTAAATA
AAAAAAATTTCTTCTGTACATTCTTAGCCTCTTTTTTCTTTGTTTTATCTTTTCGGCATTTAGCTTTCTTAAGCTTTTTGGTACACTGCCCCTTCAGTTTTGGCTGGTAG
CACAAGAACAATCATTTTTTCGTTCTTTTTCCAGTTCTTTTCAAGTTTCAAATTGAAATTAACAGAACCAATCTTTAGGATGTTGGAAGGAACAATGGATTCTCCTTTCT
AATTCAACTTTACAGAGTTTGTCTCAG

Protein sequence

Show/hide protein sequence

MGRLFFITLEGNFYSCKHCKTHLALSKDIISRTFHCRHGRAYLFNNVVNVTVGEQEERMMITGLHTVVDIFCVGCGSILGWKYEVAYDKSQKYKEGKYILEMFKVLGPDG
NSYLASHDPQLAGSDGDDA

Lsi01G015340 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome