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Lsi01G015370 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G015370
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionXyloglucan endotransglucosylase/hydrolase
Genome locationchr01:13477162..13478869
RNA-Seq ExpressionLsi01G015370
SyntenyLsi01G015370
Gene Ontology termsGO:0010411 - xyloglucan metabolic process (biological process)
GO:0042546 - cell wall biogenesis (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds (molecular function)
GO:0016762 - xyloglucan:xyloglucosyl transferase activity (molecular function)
InterPro domainsIPR000757 - Glycoside hydrolase family 16
IPR013320 - Concanavalin A-like lectin/glucanase domain superfamily
IPR044791 - Beta-glucanase/XTH


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CCH26636.1 putative xyloglucan endotransglucosylase/hydrolase [Cucumis sativus]2.9e-2573.63Show/hide
Query:  MKGSKMSKLFVCLVIVFISILKKDVVSQQ-VKFDENYVVTSSQDHVVRLRGGAEVQLSLDQAGGAAFQSKVGYPSGYFEMKIKLPSKHSPG
        MKGS    LF+CLV+VFIS LKKDVVSQ+ + FD+NYVVTSSQDHV+RL GG E QL+LDQAGG AFQS + Y SGYFEM+IKLPS HSPG
Subjt:  MKGSKMSKLFVCLVIVFISILKKDVVSQQ-VKFDENYVVTSSQDHVVRLRGGAEVQLSLDQAGGAAFQSKVGYPSGYFEMKIKLPSKHSPG

KAE8653589.1 hypothetical protein Csa_007107 [Cucumis sativus]2.9e-1756.41Show/hide
Query:  LVIVFISILKKDVVSQQVKFDENYVVTSSQDHVVRLRGGAEVQLSLDQAGGAAFQSKVGYPSGYFEMKIKLPSKHSPG
        +V+V I+ L+ +VV ++  FD+NY+VT  QDH +R  GGA+VQLSLD A G  F+SK+GY SG+F +K+KLPS+HSPG
Subjt:  LVIVFISILKKDVVSQQVKFDENYVVTSSQDHVVRLRGGAEVQLSLDQAGGAAFQSKVGYPSGYFEMKIKLPSKHSPG

XP_022961348.1 xyloglucan endotransglucosylase/hydrolase protein 2-like [Cucurbita moschata]5.9e-1864.1Show/hide
Query:  LVIVFISILKKDVVSQQVKFDENYVVTSSQDHVVRLRGGAEVQLSLDQAGGAAFQSKVGYPSGYFEMKIKLPSKHSPG
        LV++ +S LK  VV +++ FDENY VT SQDH VRLR G+EVQLSLDQA G  F+SK+ Y SGYF+MK+KLPS+ SPG
Subjt:  LVIVFISILKKDVVSQQVKFDENYVVTSSQDHVVRLRGGAEVQLSLDQAGGAAFQSKVGYPSGYFEMKIKLPSKHSPG

XP_022987397.1 xyloglucan endotransglucosylase/hydrolase protein 2-like [Cucurbita maxima]1.4e-1660.26Show/hide
Query:  LVIVFISILKKDVVSQQVKFDENYVVTSSQDHVVRLRGGAEVQLSLDQAGGAAFQSKVGYPSGYFEMKIKLPSKHSPG
        LV++ +  +K  VV +++ FDENY +T SQDH VRL+GG+EVQLSLDQA G  F+SK+ Y SGYF MK+KLPS+ SPG
Subjt:  LVIVFISILKKDVVSQQVKFDENYVVTSSQDHVVRLRGGAEVQLSLDQAGGAAFQSKVGYPSGYFEMKIKLPSKHSPG

XP_031740431.1 xyloglucan endotransglucosylase/hydrolase protein 2-like [Cucumis sativus]2.9e-2573.63Show/hide
Query:  MKGSKMSKLFVCLVIVFISILKKDVVSQQ-VKFDENYVVTSSQDHVVRLRGGAEVQLSLDQAGGAAFQSKVGYPSGYFEMKIKLPSKHSPG
        MKGS    LF+CLV+VFIS LKKDVVSQ+ + FD+NYVVTSSQDHV+RL GG E QL+LDQAGG AFQS + Y SGYFEM+IKLPS HSPG
Subjt:  MKGSKMSKLFVCLVIVFISILKKDVVSQQ-VKFDENYVVTSSQDHVVRLRGGAEVQLSLDQAGGAAFQSKVGYPSGYFEMKIKLPSKHSPG

TrEMBL top hitse value%identityAlignment
A0A0A0KXI7 GH16 domain-containing protein7.0e-2572.53Show/hide
Query:  MKGSKMSKLFVCLVIVFISILKKDVVSQQ-VKFDENYVVTSSQDHVVRLRGGAEVQLSLDQAGGAAFQSKVGYPSGYFEMKIKLPSKHSPG
        MKGS    LF+CLV+VFIS LKKDVVSQ+ + FD+NYVV SSQDHV+RL GG E QL+LDQAGG AFQS + Y SGYFEM+IKLPS HSPG
Subjt:  MKGSKMSKLFVCLVIVFISILKKDVVSQQ-VKFDENYVVTSSQDHVVRLRGGAEVQLSLDQAGGAAFQSKVGYPSGYFEMKIKLPSKHSPG

A0A0A0M3A1 GH16 domain-containing protein1.4e-1756.41Show/hide
Query:  LVIVFISILKKDVVSQQVKFDENYVVTSSQDHVVRLRGGAEVQLSLDQAGGAAFQSKVGYPSGYFEMKIKLPSKHSPG
        +V+V I+ L+ +VV ++  FD+NY+VT  QDH +R  GGA+VQLSLD A G  F+SK+GY SG+F +K+KLPS+HSPG
Subjt:  LVIVFISILKKDVVSQQVKFDENYVVTSSQDHVVRLRGGAEVQLSLDQAGGAAFQSKVGYPSGYFEMKIKLPSKHSPG

A0A6J1HBJ0 xyloglucan endotransglucosylase/hydrolase protein 2-like2.8e-1864.1Show/hide
Query:  LVIVFISILKKDVVSQQVKFDENYVVTSSQDHVVRLRGGAEVQLSLDQAGGAAFQSKVGYPSGYFEMKIKLPSKHSPG
        LV++ +S LK  VV +++ FDENY VT SQDH VRLR G+EVQLSLDQA G  F+SK+ Y SGYF+MK+KLPS+ SPG
Subjt:  LVIVFISILKKDVVSQQVKFDENYVVTSSQDHVVRLRGGAEVQLSLDQAGGAAFQSKVGYPSGYFEMKIKLPSKHSPG

A0A6J1JA91 xyloglucan endotransglucosylase/hydrolase protein 2-like7.0e-1760.26Show/hide
Query:  LVIVFISILKKDVVSQQVKFDENYVVTSSQDHVVRLRGGAEVQLSLDQAGGAAFQSKVGYPSGYFEMKIKLPSKHSPG
        LV++ +  +K  VV +++ FDENY +T SQDH VRL+GG+EVQLSLDQA G  F+SK+ Y SGYF MK+KLPS+ SPG
Subjt:  LVIVFISILKKDVVSQQVKFDENYVVTSSQDHVVRLRGGAEVQLSLDQAGGAAFQSKVGYPSGYFEMKIKLPSKHSPG

N0DX41 Putative xyloglucan endotransglucosylase/hydrolase1.4e-2573.63Show/hide
Query:  MKGSKMSKLFVCLVIVFISILKKDVVSQQ-VKFDENYVVTSSQDHVVRLRGGAEVQLSLDQAGGAAFQSKVGYPSGYFEMKIKLPSKHSPG
        MKGS    LF+CLV+VFIS LKKDVVSQ+ + FD+NYVVTSSQDHV+RL GG E QL+LDQAGG AFQS + Y SGYFEM+IKLPS HSPG
Subjt:  MKGSKMSKLFVCLVIVFISILKKDVVSQQ-VKFDENYVVTSSQDHVVRLRGGAEVQLSLDQAGGAAFQSKVGYPSGYFEMKIKLPSKHSPG

SwissProt top hitse value%identityAlignment
Q41542 Probable xyloglucan endotransglucosylase/hydrolase3.4e-0838.89Show/hide
Query:  MKGSKMSKLFVCLVIVFISILKKDVVSQQVKFDENYVVTSSQDHVVRLRGGAEVQLSLDQAGGAAFQSKVGYPSGYFEMKIKLPSKHSPG
        MK +  + L V   ++   +         V FD+NYV T +QDH+  + GG EVQLSLD+  G  FQ++  Y  G+F M IKL    S G
Subjt:  MKGSKMSKLFVCLVIVFISILKKDVVSQQVKFDENYVVTSSQDHVVRLRGGAEVQLSLDQAGGAAFQSKVGYPSGYFEMKIKLPSKHSPG

Q8LER3 Probable xyloglucan endotransglucosylase/hydrolase protein 71.2e-0534.15Show/hide
Query:  LFVCLVIVFISILKKDVVSQQVKFDENYVVTSSQDHVVRLRGGAEVQLSLDQAGGAAFQSKVGYPSGYFEMKIKLPSKHSPG
        +F  L +   + L + V+S+  KF++++ +  S  H+ ++ GG  +QL LD + G  F SK  Y  G   MKIKL    S G
Subjt:  LFVCLVIVFISILKKDVVSQQVKFDENYVVTSSQDHVVRLRGGAEVQLSLDQAGGAAFQSKVGYPSGYFEMKIKLPSKHSPG

Q9LJR7 Xyloglucan endotransglucosylase/hydrolase protein 34.7e-1047.69Show/hide
Query:  VSQQVKFDENYVVTSSQDHVVRLRGGAEVQLSLDQAGGAAFQSKVGYPSGYFEMKIKLPSKHSPG
        + + V F +NY+VT  Q HV  L  G EV L +DQ+ G  F+SK  Y SG FEM+IK+PS ++ G
Subjt:  VSQQVKFDENYVVTSSQDHVVRLRGGAEVQLSLDQAGGAAFQSKVGYPSGYFEMKIKLPSKHSPG

Q9SV60 Xyloglucan endotransglucosylase/hydrolase protein 21.7e-1254.1Show/hide
Query:  VKFDENYVVTSSQDHVVRLRGGAEVQLSLDQAGGAAFQSKVGYPSGYFEMKIKLPSKHSPG
        + FD NYVVT  QDH+++L  G EVQLS+D + G+ F+SK  Y SG+F+M+IKLP + S G
Subjt:  VKFDENYVVTSSQDHVVRLRGGAEVQLSLDQAGGAAFQSKVGYPSGYFEMKIKLPSKHSPG

Q9SV61 Putative xyloglucan endotransglucosylase/hydrolase protein 12.5e-1151.61Show/hide
Query:  QVKFDENYVVTSSQDHVVRLRGGAEVQLSLDQAGGAAFQSKVGYPSGYFEMKIKLPSKHSPG
        +V FD+NYVVT  Q++V++L  G EVQLSLD + G+ F+SK  Y SG+F+++IK+P K + G
Subjt:  QVKFDENYVVTSSQDHVVRLRGGAEVQLSLDQAGGAAFQSKVGYPSGYFEMKIKLPSKHSPG

Arabidopsis top hitse value%identityAlignment
AT3G25050.1 xyloglucan endotransglucosylase/hydrolase 33.3e-1147.69Show/hide
Query:  VSQQVKFDENYVVTSSQDHVVRLRGGAEVQLSLDQAGGAAFQSKVGYPSGYFEMKIKLPSKHSPG
        + + V F +NY+VT  Q HV  L  G EV L +DQ+ G  F+SK  Y SG FEM+IK+PS ++ G
Subjt:  VSQQVKFDENYVVTSSQDHVVRLRGGAEVQLSLDQAGGAAFQSKVGYPSGYFEMKIKLPSKHSPG

AT3G48580.1 xyloglucan endotransglucosylase/hydrolase 111.0e-0431.52Show/hide
Query:  MKGSKMSKLFVCLVIVFI--SILKKDVVSQQVKFDENYVVTSSQDHVVRLRGGAEVQLSLDQAGGAAFQSKVGYPSGYFEMKIKLPSKHSPG
        M+GS    L + +V+V +  +   ++  +  V +  NY  T     +V +   +E+QL+LD+  G+ F+S++ Y SGYF ++IK P   S G
Subjt:  MKGSKMSKLFVCLVIVFI--SILKKDVVSQQVKFDENYVVTSSQDHVVRLRGGAEVQLSLDQAGGAAFQSKVGYPSGYFEMKIKLPSKHSPG

AT4G13080.1 xyloglucan endotransglucosylase/hydrolase 11.8e-1251.61Show/hide
Query:  QVKFDENYVVTSSQDHVVRLRGGAEVQLSLDQAGGAAFQSKVGYPSGYFEMKIKLPSKHSPG
        +V FD+NYVVT  Q++V++L  G EVQLSLD + G+ F+SK  Y SG+F+++IK+P K + G
Subjt:  QVKFDENYVVTSSQDHVVRLRGGAEVQLSLDQAGGAAFQSKVGYPSGYFEMKIKLPSKHSPG

AT4G13090.1 xyloglucan endotransglucosylase/hydrolase 21.2e-1354.1Show/hide
Query:  VKFDENYVVTSSQDHVVRLRGGAEVQLSLDQAGGAAFQSKVGYPSGYFEMKIKLPSKHSPG
        + FD NYVVT  QDH+++L  G EVQLS+D + G+ F+SK  Y SG+F+M+IKLP + S G
Subjt:  VKFDENYVVTSSQDHVVRLRGGAEVQLSLDQAGGAAFQSKVGYPSGYFEMKIKLPSKHSPG

AT4G37800.1 xyloglucan endotransglucosylase/hydrolase 78.5e-0734.15Show/hide
Query:  LFVCLVIVFISILKKDVVSQQVKFDENYVVTSSQDHVVRLRGGAEVQLSLDQAGGAAFQSKVGYPSGYFEMKIKLPSKHSPG
        +F  L +   + L + V+S+  KF++++ +  S  H+ ++ GG  +QL LD + G  F SK  Y  G   MKIKL    S G
Subjt:  LFVCLVIVFISILKKDVVSQQVKFDENYVVTSSQDHVVRLRGGAEVQLSLDQAGGAAFQSKVGYPSGYFEMKIKLPSKHSPG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGGGTCTAAAATGAGCAAGCTCTTTGTTTGTCTTGTTATTGTGTTTATAAGCATTTTGAAGAAGGATGTTGTTAGCCAACAAGTTAAGTTCGATGAAAATTATGT
TGTTACATCTAGCCAAGATCATGTTGTGCGGTTAAGAGGTGGAGCAGAAGTTCAACTTTCTCTCGATCAAGCAGGAGGAGCTGCTTTCCAGTCAAAGGTTGGGTATCCAT
CGGGATATTTTGAGATGAAAATAAAGCTACCATCCAAGCATTCTCCTGGA
mRNA sequenceShow/hide mRNA sequence
ATGAAAGGGTCTAAAATGAGCAAGCTCTTTGTTTGTCTTGTTATTGTGTTTATAAGCATTTTGAAGAAGGATGTTGTTAGCCAACAAGTTAAGTTCGATGAAAATTATGT
TGTTACATCTAGCCAAGATCATGTTGTGCGGTTAAGAGGTGGAGCAGAAGTTCAACTTTCTCTCGATCAAGCAGGAGGAGCTGCTTTCCAGTCAAAGGTTGGGTATCCAT
CGGGATATTTTGAGATGAAAATAAAGCTACCATCCAAGCATTCTCCTGGA
Protein sequenceShow/hide protein sequence
MKGSKMSKLFVCLVIVFISILKKDVVSQQVKFDENYVVTSSQDHVVRLRGGAEVQLSLDQAGGAAFQSKVGYPSGYFEMKIKLPSKHSPG