; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi01G015420 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G015420
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionhigh mobility group B protein 1
Genome locationchr01:13559242..13562367
RNA-Seq ExpressionLsi01G015420
SyntenyLsi01G015420
Gene Ontology termsGO:0006333 - chromatin assembly or disassembly (biological process)
GO:0000785 - chromatin (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003682 - chromatin binding (molecular function)
GO:0030527 - structural constituent of chromatin (molecular function)
InterPro domainsIPR009071 - High mobility group box domain
IPR031061 - High mobility group protein HMGB, plant
IPR036910 - High mobility group box domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031875.1 high mobility group B protein 1 [Cucumis melo var. makuwa]3.1e-6696.03Show/hide
Query:  QGSKGKGTSRVSKEALKPVDDRKVGKRKAAVKADKGIKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEYKRDNPNVKAVSAVGKAGGERWKSLSHAE
        +GSKGKGTSRVSKEALKPVDDRKVGKRKA VKADKG KRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEYKR+NPNVKAVSAVGKAGGE+WKSLSHAE
Subjt:  QGSKGKGTSRVSKEALKPVDDRKVGKRKAAVKADKGIKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEYKRDNPNVKAVSAVGKAGGERWKSLSHAE

Query:  KAPYEAKAAKRKAEYEKLIRAYDSKKASAADDEESERSKSEVNDEDEASEE
        KAPYEAKAAKRKAEYEKL+RAYDSKKASAADDEESERSKSEVNDEDEASEE
Subjt:  KAPYEAKAAKRKAEYEKLIRAYDSKKASAADDEESERSKSEVNDEDEASEE

XP_008449957.1 PREDICTED: high mobility group B protein 1 [Cucumis melo]2.1e-6793.53Show/hide
Query:  QGSKGKGTSRVSKEALKPVDDRKVGKRKAAVKADKGIKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEYKRDNPNVKAVSAVGKAGGERWKSLSHAE
        +GSKGKGTSRVSKEALKPVDDRKVGKRKA VKADKG KRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEYKR+NPNVKAVSAVGKAGGE+WKSLSHAE
Subjt:  QGSKGKGTSRVSKEALKPVDDRKVGKRKAAVKADKGIKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEYKRDNPNVKAVSAVGKAGGERWKSLSHAE

Query:  KAPYEAKAAKRKAEYEKLIRAYDSKKASAADDEESERSKSEVNDEDEASEEEHQEDEDDEDDDEDDDEDD
        KAPYEAKAAKRKAEYEKL+RAYDSKKASAADDEESERSKSEVNDEDEASEEEHQE EDDE+D+EDD++DD
Subjt:  KAPYEAKAAKRKAEYEKLIRAYDSKKASAADDEESERSKSEVNDEDEASEEEHQEDEDDEDDDEDDDEDD

XP_011653690.1 high mobility group B protein 1 [Cucumis sativus]3.3e-6894.12Show/hide
Query:  QGSKGKGTSRVSKEALKPVDDRKVGKRKAAVKADKGIKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEYKRDNPNVKAVSAVGKAGGERWKSLSHAE
        +GSKGKGTSRVSKEALKPVDDRKVGKRKA VKADKGIKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEYKR+NPNVKAVSAVGKAGGE+WKSLSHAE
Subjt:  QGSKGKGTSRVSKEALKPVDDRKVGKRKAAVKADKGIKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEYKRDNPNVKAVSAVGKAGGERWKSLSHAE

Query:  KAPYEAKAAKRKAEYEKLIRAYDSKKASAADDEESERSKSEVNDEDEASEEEHQEDEDDEDDDEDDDEDD
        KAPYEAKAAKRKAEYEKL+RAYDSKKASAADDEESERSKSEVNDEDEASEEEHQED+D+E  DEDD+EDD
Subjt:  KAPYEAKAAKRKAEYEKLIRAYDSKKASAADDEESERSKSEVNDEDEASEEEHQEDEDDEDDDEDDDEDD

XP_023545143.1 high mobility group B protein 1-like [Cucurbita pepo subsp. pepo]1.9e-6388.24Show/hide
Query:  QGSKGKGTSRVSKEALKPVDDRKVGKRKAAVKADKGIKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEYKRDNPNVKAVSAVGKAGGERWKSLSHAE
        +G KGKGTSRVSKEALKPVDDRKVGKRKAA+KADKGIKRPTKK+LKA KDPNKPKRPPSAFFVFLEEFR+EYKR+NPNVKAVSAVGKAGG+RW+SL+H E
Subjt:  QGSKGKGTSRVSKEALKPVDDRKVGKRKAAVKADKGIKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEYKRDNPNVKAVSAVGKAGGERWKSLSHAE

Query:  KAPYEAKAAKRKAEYEKLIRAYDSKKASAADDEESERSKSEVNDEDEASEEEHQEDEDDEDDDEDDDEDD
        KAPYEAKAAKRKAEYEKL+RAYDSKKAS ADDEE ERSKSEVN EDEASEEEH ED+D+E+DDEDD+EDD
Subjt:  KAPYEAKAAKRKAEYEKLIRAYDSKKASAADDEESERSKSEVNDEDEASEEEHQEDEDDEDDDEDDDEDD

XP_038883904.1 high mobility group B protein 1 [Benincasa hispida]1.9e-6894.15Show/hide
Query:  QGSKGKGTSRVSKEALKPVDDRKVGKRKAAVKADKGIKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEYKRDNPNVKAVSAVGKAGGERWKSLSHAE
        +GSKGKGTSRVSKEALKPVDDRKVGKRKAAVKADKG+ RPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEYKR+NPNVKAVSAVGKAGGE+WKSLSHAE
Subjt:  QGSKGKGTSRVSKEALKPVDDRKVGKRKAAVKADKGIKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEYKRDNPNVKAVSAVGKAGGERWKSLSHAE

Query:  KAPYEAKAAKRKAEYEKLIRAYDSKKASAADDEESERSKSEVNDEDEASEEEHQEDEDDEDDDEDDDEDDD
        KAPYEA+AAKRKAEYEKL++AYDSKKASAADDEESERSKSEVNDEDEASEEEHQED DDEDDDED+DEDDD
Subjt:  KAPYEAKAAKRKAEYEKLIRAYDSKKASAADDEESERSKSEVNDEDEASEEEHQEDEDDEDDDEDDDEDDD

TrEMBL top hitse value%identityAlignment
A0A0A0L1B2 HMG box domain-containing protein1.6e-6894.12Show/hide
Query:  QGSKGKGTSRVSKEALKPVDDRKVGKRKAAVKADKGIKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEYKRDNPNVKAVSAVGKAGGERWKSLSHAE
        +GSKGKGTSRVSKEALKPVDDRKVGKRKA VKADKGIKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEYKR+NPNVKAVSAVGKAGGE+WKSLSHAE
Subjt:  QGSKGKGTSRVSKEALKPVDDRKVGKRKAAVKADKGIKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEYKRDNPNVKAVSAVGKAGGERWKSLSHAE

Query:  KAPYEAKAAKRKAEYEKLIRAYDSKKASAADDEESERSKSEVNDEDEASEEEHQEDEDDEDDDEDDDEDD
        KAPYEAKAAKRKAEYEKL+RAYDSKKASAADDEESERSKSEVNDEDEASEEEHQED+D+E  DEDD+EDD
Subjt:  KAPYEAKAAKRKAEYEKLIRAYDSKKASAADDEESERSKSEVNDEDEASEEEHQEDEDDEDDDEDDDEDD

A0A1S3BML2 high mobility group B protein 11.0e-6793.53Show/hide
Query:  QGSKGKGTSRVSKEALKPVDDRKVGKRKAAVKADKGIKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEYKRDNPNVKAVSAVGKAGGERWKSLSHAE
        +GSKGKGTSRVSKEALKPVDDRKVGKRKA VKADKG KRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEYKR+NPNVKAVSAVGKAGGE+WKSLSHAE
Subjt:  QGSKGKGTSRVSKEALKPVDDRKVGKRKAAVKADKGIKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEYKRDNPNVKAVSAVGKAGGERWKSLSHAE

Query:  KAPYEAKAAKRKAEYEKLIRAYDSKKASAADDEESERSKSEVNDEDEASEEEHQEDEDDEDDDEDDDEDD
        KAPYEAKAAKRKAEYEKL+RAYDSKKASAADDEESERSKSEVNDEDEASEEEHQE EDDE+D+EDD++DD
Subjt:  KAPYEAKAAKRKAEYEKLIRAYDSKKASAADDEESERSKSEVNDEDEASEEEHQEDEDDEDDDEDDDEDD

A0A5A7SRU9 High mobility group B protein 11.5e-6696.03Show/hide
Query:  QGSKGKGTSRVSKEALKPVDDRKVGKRKAAVKADKGIKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEYKRDNPNVKAVSAVGKAGGERWKSLSHAE
        +GSKGKGTSRVSKEALKPVDDRKVGKRKA VKADKG KRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEYKR+NPNVKAVSAVGKAGGE+WKSLSHAE
Subjt:  QGSKGKGTSRVSKEALKPVDDRKVGKRKAAVKADKGIKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEYKRDNPNVKAVSAVGKAGGERWKSLSHAE

Query:  KAPYEAKAAKRKAEYEKLIRAYDSKKASAADDEESERSKSEVNDEDEASEE
        KAPYEAKAAKRKAEYEKL+RAYDSKKASAADDEESERSKSEVNDEDEASEE
Subjt:  KAPYEAKAAKRKAEYEKLIRAYDSKKASAADDEESERSKSEVNDEDEASEE

A0A6J1DBK9 high mobility group B protein 12.6e-6389.02Show/hide
Query:  QGSKGKGTSRVSKEALKPVDDRKVGKRKAAVKADKGIKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEYKRDNPNVKAVSAVGKAGGERWKSLSHAE
        +GSKGKGTSRVSKEALKPVDDRKVGKRKAA+KADK  KRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKE+KRDNP+VKAVSAVGKAGGE+WKSLSHAE
Subjt:  QGSKGKGTSRVSKEALKPVDDRKVGKRKAAVKADKGIKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEYKRDNPNVKAVSAVGKAGGERWKSLSHAE

Query:  KAPYEAKAAKRKAEYEKLIRAYDSKKASAADDEESERSKSEVNDEDEASEEEHQEDEDD--EDDDEDDDEDDD
        KAPYEAKAAK+KAEYEKL+RAYDSKKAS   DEESERSKSEVNDEDEASEEEHQ+D+DD  EDD++D+DEDDD
Subjt:  KAPYEAKAAKRKAEYEKLIRAYDSKKASAADDEESERSKSEVNDEDEASEEEHQEDEDD--EDDDEDDDEDDD

A0A6J1GCX7 high mobility group B protein 1-like7.6e-6388.62Show/hide
Query:  KGKGTSRVSKEALKPVDDRKVGKRKAAVKADKGIKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEYKRDNPNVKAVSAVGKAGGERWKSLSHAEKAP
        KGKGTSRVSKEALKPVDDRKVGKRKAA+KADKGIKRPTKK+LKA KDPNKPKRPPSAFFVFLEEFR+EYKR+NPNVKAVSAVGKAGG+RW+SL+H EKAP
Subjt:  KGKGTSRVSKEALKPVDDRKVGKRKAAVKADKGIKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEYKRDNPNVKAVSAVGKAGGERWKSLSHAEKAP

Query:  YEAKAAKRKAEYEKLIRAYDSKKASAADDEESERSKSEVNDEDEASEEEHQEDEDDEDDDEDDDEDD
        YEAKAAKRKAEYEKL+RAYDSKKAS ADDEE ERSKSEVN EDEASEEEH ED++++DDDEDD+EDD
Subjt:  YEAKAAKRKAEYEKLIRAYDSKKASAADDEESERSKSEVNDEDEASEEEHQEDEDDEDDDEDDDEDD

SwissProt top hitse value%identityAlignment
O49595 High mobility group B protein 17.9e-4164.25Show/hide
Query:  SKGKGTSRVSKEALKPVDDRKVGKRKAAVKADKGIKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEYKRDNPNVKAVSAVGKAGGERWKSLSHAEKA
        +KGK   + +KEALKPVDDRKVGKRKA   A+K  KR T+K+ KAKKDPNKPKR PSAFFVFLE+FR  +K++NPNVKAVSAVGKAGG++WKS+S AEKA
Subjt:  SKGKGTSRVSKEALKPVDDRKVGKRKAAVKADKGIKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEYKRDNPNVKAVSAVGKAGGERWKSLSHAEKA

Query:  PYEAKAAKRKAEYEKLIRAYDSKKASAADDEESERSKSEVNDEDEASEEEH----------QEDEDDEDDDEDDDEDDD
        PYE KAAKRKAEYEK + AY+      +D  ESE+S+SE+NDEDEAS EE           +E+E++EDDD+DDDE++D
Subjt:  PYEAKAAKRKAEYEKLIRAYDSKKASAADDEESERSKSEVNDEDEASEEEH----------QEDEDDEDDDEDDDEDDD

P26585 HMG1/2-like protein8.5e-2756.58Show/hide
Query:  SKEALKPVDDR-KVGKRKAAVKADKGIKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEYKRDNPNVKAVSAVGKAGGERWKSLSHAEKAPYEAKAAK
        SK   K  D +  V K+ AA KA    ++P  K  KA KDPNKPKRPPSAFFVF+EEFRK + +++P  KAVSAVGKA G +WK++S AEKAPY AK+ K
Subjt:  SKEALKPVDDR-KVGKRKAAVKADKGIKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEYKRDNPNVKAVSAVGKAGGERWKSLSHAEKAPYEAKAAK

Query:  RKAEYEKLIRAYDSKKA---SAADDEESERSKSEVNDEDEASEEEHQEDEDD
        RK EYEK +RAY+ K+A   +  D+EESE+S SEVNDED+  E   +E++DD
Subjt:  RKAEYEKLIRAYDSKKA---SAADDEESERSKSEVNDEDEASEEEHQEDEDD

P27347 DNA-binding protein MNB1B4.2e-2655.7Show/hide
Query:  KVGKRKAAVKAD-------KGIKRPTK-KDLKAKKDPNKPKRPPSAFFVFLEEFRKEYKRDNPNVKAVSAVGKAGGERWKSLSHAEKAPYEAKAAKRKAE
        K  K K A KAD       KG ++P K +  KA KDPNKPKR PSAFFVF+EEFRKE+K  NP  K+V+AVGKA G+RWKSLS ++KAPY AKA K K E
Subjt:  KVGKRKAAVKAD-------KGIKRPTK-KDLKAKKDPNKPKRPPSAFFVFLEEFRKEYKRDNPNVKAVSAVGKAGGERWKSLSHAEKAPYEAKAAKRKAE

Query:  YEKLIRAYDSKKASAA-----------DDEESERSKSEVNDEDEASEEEHQEDEDDED
        Y K I AY+  +++AA           D+EES++SKSEVNDED+  EE  +EDEDD++
Subjt:  YEKLIRAYDSKKASAA-----------DDEESERSKSEVNDEDEASEEEHQEDEDDED

P40620 HMG1/2-like protein6.5e-2752.76Show/hide
Query:  QGSKGKGTSRVSKEALKPVDDRKVGKRKAAVKADKGIKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEYKRDNPNVKAVSAVGKAGGERWKSLSHAE
        +G K KG S+ +        + K+   K    A KG K+P K   K  KDPNKPKRPPSAFFVF+ +FR++YK+D+PN K+V+AVGKA GE WKSLS  E
Subjt:  QGSKGKGTSRVSKEALKPVDDRKVGKRKAAVKADKGIKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEYKRDNPNVKAVSAVGKAGGERWKSLSHAE

Query:  KAPYEAKAAKRKAEYEKLIRAYDSKKASAADDEESERSKSEVNDEDEASEEEHQEDEDDEDDD
        KAPY  +A K+K EYE  ++AY+ K     D+E S++SKSEVNDED     E +EDE+DEDDD
Subjt:  KAPYEAKAAKRKAEYEKLIRAYDSKKASAADDEESERSKSEVNDEDEASEEEHQEDEDDEDDD

P93047 High mobility group B protein 39.4e-2656.43Show/hide
Query:  KVGKRKAAVKADK--GIKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEYKRDNPNVKAVSAVGKAGGERWKSLSHAEKAPYEAKAAKRKAEYEKLIR
        K  K KA  ++ K    K+P K    A KDPNKPKRP SAFFVF+E+FR  YK ++P  K+V+AVGKAGGE+WKSLS +EKAPY AKA KRK EYEK ++
Subjt:  KVGKRKAAVKADK--GIKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEYKRDNPNVKAVSAVGKAGGERWKSLSHAEKAPYEAKAAKRKAEYEKLIR

Query:  AYDSK-KASAADDEESERSKSEVNDEDEASEEEHQEDEDD
        AY+ K +    +DEES++S SEVNDED+A +   +E++DD
Subjt:  AYDSK-KASAADDEESERSKSEVNDEDEASEEEHQEDEDD

Arabidopsis top hitse value%identityAlignment
AT1G20696.1 high mobility group B36.7e-2756.43Show/hide
Query:  KVGKRKAAVKADK--GIKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEYKRDNPNVKAVSAVGKAGGERWKSLSHAEKAPYEAKAAKRKAEYEKLIR
        K  K KA  ++ K    K+P K    A KDPNKPKRP SAFFVF+E+FR  YK ++P  K+V+AVGKAGGE+WKSLS +EKAPY AKA KRK EYEK ++
Subjt:  KVGKRKAAVKADK--GIKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEYKRDNPNVKAVSAVGKAGGERWKSLSHAEKAPYEAKAAKRKAEYEKLIR

Query:  AYDSK-KASAADDEESERSKSEVNDEDEASEEEHQEDEDD
        AY+ K +    +DEES++S SEVNDED+A +   +E++DD
Subjt:  AYDSK-KASAADDEESERSKSEVNDEDEASEEEHQEDEDD

AT3G51880.1 high mobility group B15.6e-4264.25Show/hide
Query:  SKGKGTSRVSKEALKPVDDRKVGKRKAAVKADKGIKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEYKRDNPNVKAVSAVGKAGGERWKSLSHAEKA
        +KGK   + +KEALKPVDDRKVGKRKA   A+K  KR T+K+ KAKKDPNKPKR PSAFFVFLE+FR  +K++NPNVKAVSAVGKAGG++WKS+S AEKA
Subjt:  SKGKGTSRVSKEALKPVDDRKVGKRKAAVKADKGIKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEYKRDNPNVKAVSAVGKAGGERWKSLSHAEKA

Query:  PYEAKAAKRKAEYEKLIRAYDSKKASAADDEESERSKSEVNDEDEASEEEH----------QEDEDDEDDDEDDDEDDD
        PYE KAAKRKAEYEK + AY+      +D  ESE+S+SE+NDEDEAS EE           +E+E++EDDD+DDDE++D
Subjt:  PYEAKAAKRKAEYEKLIRAYDSKKASAADDEESERSKSEVNDEDEASEEEH----------QEDEDDEDDDEDDDEDDD

AT3G51880.2 high mobility group B11.1e-4061.29Show/hide
Query:  SKGKGTSRVSKEALKPVDDRKVGKRKAAVKADKGIKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEYKRDNPNVKAVSAVGKAGGERWKSLSHAEKA
        +KGK   + +KEALKPVDDRKVGKRKA   A+K  KR T+K+ KAKKDPNKPKR PSAFFVFLE+FR  +K++NPNVKAVSAVGKAGG++WKS+S AEKA
Subjt:  SKGKGTSRVSKEALKPVDDRKVGKRKAAVKADKGIKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEYKRDNPNVKAVSAVGKAGGERWKSLSHAEKA

Query:  PYEAKAAKRKAEYEKLIRAYDSKKASAADDEESERSKSEVNDEDEASEE-----------------EHQEDEDDEDDDEDDDEDDD
        PYE KAAKRKAEYEK + AY+      +D  ESE+S+SE+NDEDEAS E                 + +E+E++EDDD+DDDE++D
Subjt:  PYEAKAAKRKAEYEKLIRAYDSKKASAADDEESERSKSEVNDEDEASEE-----------------EHQEDEDDEDDDEDDDEDDD

AT3G51880.3 high mobility group B15.6e-4264.25Show/hide
Query:  SKGKGTSRVSKEALKPVDDRKVGKRKAAVKADKGIKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEYKRDNPNVKAVSAVGKAGGERWKSLSHAEKA
        +KGK   + +KEALKPVDDRKVGKRKA   A+K  KR T+K+ KAKKDPNKPKR PSAFFVFLE+FR  +K++NPNVKAVSAVGKAGG++WKS+S AEKA
Subjt:  SKGKGTSRVSKEALKPVDDRKVGKRKAAVKADKGIKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEYKRDNPNVKAVSAVGKAGGERWKSLSHAEKA

Query:  PYEAKAAKRKAEYEKLIRAYDSKKASAADDEESERSKSEVNDEDEASEEEH----------QEDEDDEDDDEDDDEDDD
        PYE KAAKRKAEYEK + AY+      +D  ESE+S+SE+NDEDEAS EE           +E+E++EDDD+DDDE++D
Subjt:  PYEAKAAKRKAEYEKLIRAYDSKKASAADDEESERSKSEVNDEDEASEEEH----------QEDEDDEDDDEDDDEDDD

AT3G51880.4 high mobility group B13.0e-4368.29Show/hide
Query:  SKGKGTSRVSKEALKPVDDRKVGKRKAAVKADKGIKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEYKRDNPNVKAVSAVGKAGGERWKSLSHAEKA
        +KGK   + +KEALKPVDDRKVGKRKA   A+K  KR T+K+ KAKKDPNKPKR PSAFFVFLE+FR  +K++NPNVKAVSAVGKAGG++WKS+S AEKA
Subjt:  SKGKGTSRVSKEALKPVDDRKVGKRKAAVKADKGIKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEYKRDNPNVKAVSAVGKAGGERWKSLSHAEKA

Query:  PYEAKAAKRKAEYEKLIRAYDSKKASAADDEESERSKSEVNDEDEASEEEHQEDEDDEDDDEDD
        PYE KAAKRKAEYEK + AY+      +D  ESE+S+SE+NDEDEAS EE  ED+DD+DD+E+D
Subjt:  PYEAKAAKRKAEYEKLIRAYDSKKASAADDEESERSKSEVNDEDEASEEEHQEDEDDEDDDEDD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCTCTAATGCTCTGTTAGCGATTAAACAGGGGTCCAAGGGTAAGGGAACATCAAGGGTCTCCAAAGAAGCTTTGAAGCCAGTCGATGATAGAAAGGTTGGGAAGCG
AAAGGCTGCCGTCAAAGCTGACAAGGGTATCAAACGACCAACAAAGAAAGATTTGAAAGCCAAGAAAGATCCCAACAAACCTAAGAGGCCCCCGAGCGCTTTCTTTGTTT
TCCTTGAGGAGTTCAGAAAGGAGTACAAAAGGGACAATCCTAATGTGAAGGCAGTATCTGCAGTCGGAAAAGCTGGAGGAGAGAGGTGGAAATCCTTGAGTCATGCTGAA
AAAGCACCATATGAAGCCAAGGCGGCTAAGAGGAAGGCTGAATACGAAAAGCTTATCAGGGCATATGACAGCAAGAAGGCTAGCGCAGCAGATGACGAAGAATCAGAGAG
ATCGAAATCTGAAGTGAACGACGAAGATGAGGCCAGTGAGGAGGAGCATCAAGAAGATGAGGATGACGAGGACGACGATGAAGATGACGATGAAGACGATGACTAA
mRNA sequenceShow/hide mRNA sequence
ATGATCTCTAATGCTCTGTTAGCGATTAAACAGGGGTCCAAGGGTAAGGGAACATCAAGGGTCTCCAAAGAAGCTTTGAAGCCAGTCGATGATAGAAAGGTTGGGAAGCG
AAAGGCTGCCGTCAAAGCTGACAAGGGTATCAAACGACCAACAAAGAAAGATTTGAAAGCCAAGAAAGATCCCAACAAACCTAAGAGGCCCCCGAGCGCTTTCTTTGTTT
TCCTTGAGGAGTTCAGAAAGGAGTACAAAAGGGACAATCCTAATGTGAAGGCAGTATCTGCAGTCGGAAAAGCTGGAGGAGAGAGGTGGAAATCCTTGAGTCATGCTGAA
AAAGCACCATATGAAGCCAAGGCGGCTAAGAGGAAGGCTGAATACGAAAAGCTTATCAGGGCATATGACAGCAAGAAGGCTAGCGCAGCAGATGACGAAGAATCAGAGAG
ATCGAAATCTGAAGTGAACGACGAAGATGAGGCCAGTGAGGAGGAGCATCAAGAAGATGAGGATGACGAGGACGACGATGAAGATGACGATGAAGACGATGACTAA
Protein sequenceShow/hide protein sequence
MISNALLAIKQGSKGKGTSRVSKEALKPVDDRKVGKRKAAVKADKGIKRPTKKDLKAKKDPNKPKRPPSAFFVFLEEFRKEYKRDNPNVKAVSAVGKAGGERWKSLSHAE
KAPYEAKAAKRKAEYEKLIRAYDSKKASAADDEESERSKSEVNDEDEASEEEHQEDEDDEDDDEDDDEDDD