CuGenDBv2

Gene ID	Lsi01G015530
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	AMP deaminase
Genome location	chr01:13710492..13710902
RNA-Seq Expression	Lsi01G015530
Synteny	Lsi01G015530
Gene Ontology terms	GO:0032264 - IMP salvage (biological process) GO:0046033 - AMP metabolic process (biological process) GO:0005829 - cytosol (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0003876 - AMP deaminase activity (molecular function)
InterPro domains	IPR006329 - AMP deaminase

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6603579.1 AMP deaminase, partial [Cucurbita argyrosperma subsp. sororia]

1.7e-53

92.68

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Query:  MDTYPLHMAMAALIGASVVAVSAYYMHRKTLTQLLEFAKTVERERERDDNLEVESPRHSKKQRGNYVRRKGTGYNRKGSASLPDVTAISGGADGDEKRNG
        MDTYPLHMAMAALIGASVVAVSAYYMHRKTLTQLLEFAKTVERERERDDNLEV+SP+HSKKQRG +VRRKG GYNR+GSASLPDVTAISGG DGDEKRNG
Subjt:  MDTYPLHMAMAALIGASVVAVSAYYMHRKTLTQLLEFAKTVERERERDDNLEVESPRHSKKQRGNYVRRKGTGYNRKGSASLPDVTAISGGADGDEKRNG

Query:  QVLLDVIPAGLPRLHTLPEGMDS
        QVLLDVIPAGLPRLHTLPEG +S
Subjt:  QVLLDVIPAGLPRLHTLPEGMDS

XP_008464207.1 PREDICTED: AMP deaminase isoform X1 [Cucumis melo]

5.0e-53

91.13

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Query:  MDTYPLHMAMAALIGASVVAVSAYYMHRKTLTQLLEFAKTVERERERDD-NLEVESPRHSKKQRGNYVRRKGTGYNRKGSASLPDVTAISGGADGDEKRN
        MD YPLHMAMAALIGASVVAVSAYYMHRKTLTQLLEFAKTVER+RERDD NL+VESPRHSKKQRGN+VRRKGTGYNR+ SASLPDVTAISG ADGD+KRN
Subjt:  MDTYPLHMAMAALIGASVVAVSAYYMHRKTLTQLLEFAKTVERERERDD-NLEVESPRHSKKQRGNYVRRKGTGYNRKGSASLPDVTAISGGADGDEKRN

Query:  GQVLLDVIPAGLPRLHTLPEGMDS
        GQVLLDVIPAGLPRLHTLPEG +S
Subjt:  GQVLLDVIPAGLPRLHTLPEGMDS

XP_022949958.1 AMP deaminase-like [Cucurbita moschata]

1.7e-53

92.68

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Query:  MDTYPLHMAMAALIGASVVAVSAYYMHRKTLTQLLEFAKTVERERERDDNLEVESPRHSKKQRGNYVRRKGTGYNRKGSASLPDVTAISGGADGDEKRNG
        MDTYPLHMAMAALIGASVVAVSAYYMHRKTLTQLLEFAKTVERERERDDNLEV+SP+HSKKQRG +VRRKG GYNR+GSASLPDVTAISGG DGDEKRNG
Subjt:  MDTYPLHMAMAALIGASVVAVSAYYMHRKTLTQLLEFAKTVERERERDDNLEVESPRHSKKQRGNYVRRKGTGYNRKGSASLPDVTAISGGADGDEKRNG

Query:  QVLLDVIPAGLPRLHTLPEGMDS
        QVLLDVIPAGLPRLHTLPEG +S
Subjt:  QVLLDVIPAGLPRLHTLPEGMDS

XP_023543519.1 AMP deaminase-like [Cucurbita pepo subsp. pepo]

1.7e-53

92.68

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Query:  MDTYPLHMAMAALIGASVVAVSAYYMHRKTLTQLLEFAKTVERERERDDNLEVESPRHSKKQRGNYVRRKGTGYNRKGSASLPDVTAISGGADGDEKRNG
        MDTYPLHMAMAALIGASVVAVSAYYMHRKTLTQLLEFAKTVERERERDDNLEV+SP+HSKKQRG +VRRKG GYNR+GSASLPDVTAISGG DGDEKRNG
Subjt:  MDTYPLHMAMAALIGASVVAVSAYYMHRKTLTQLLEFAKTVERERERDDNLEVESPRHSKKQRGNYVRRKGTGYNRKGSASLPDVTAISGGADGDEKRNG

Query:  QVLLDVIPAGLPRLHTLPEGMDS
        QVLLDVIPAGLPRLHTLPEG +S
Subjt:  QVLLDVIPAGLPRLHTLPEGMDS

XP_038882173.1 AMP deaminase [Benincasa hispida]

6.3e-56

94.31

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Query:  MDTYPLHMAMAALIGASVVAVSAYYMHRKTLTQLLEFAKTVERERERDDNLEVESPRHSKKQRGNYVRRKGTGYNRKGSASLPDVTAISGGADGDEKRNG
        MDTYPLHMAMAALIGASVVAVSAYYMHRKTLTQLLEFAKTVERERERDD+LEVESPRHSKKQRGN+VRRKG GYNR+GS+SLPDVTAISGGADGDEKRNG
Subjt:  MDTYPLHMAMAALIGASVVAVSAYYMHRKTLTQLLEFAKTVERERERDDNLEVESPRHSKKQRGNYVRRKGTGYNRKGSASLPDVTAISGGADGDEKRNG

Query:  QVLLDVIPAGLPRLHTLPEGMDS
        QVLLDVIPAGLPRLHTLPEG +S
Subjt:  QVLLDVIPAGLPRLHTLPEGMDS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L2N5 AMP deaminase

3.2e-53

90.32

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Query:  MDTYPLHMAMAALIGASVVAVSAYYMHRKTLTQLLEFAKTVERERERDD-NLEVESPRHSKKQRGNYVRRKGTGYNRKGSASLPDVTAISGGADGDEKRN
        MD YPLHMA+AALIGASVVAVSAYYMHRKTLTQLLEFAKTVER+RERDD N + ESPRHSKKQRGNYVRRKGTGYNR+ SASLPDVTAISGGADGD+KRN
Subjt:  MDTYPLHMAMAALIGASVVAVSAYYMHRKTLTQLLEFAKTVERERERDD-NLEVESPRHSKKQRGNYVRRKGTGYNRKGSASLPDVTAISGGADGDEKRN

Query:  GQVLLDVIPAGLPRLHTLPEGMDS
        GQVLLDVIPAGLPRLHTLPEG +S
Subjt:  GQVLLDVIPAGLPRLHTLPEGMDS

A0A1S3CKZ6 AMP deaminase

2.4e-53

91.13

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Query:  MDTYPLHMAMAALIGASVVAVSAYYMHRKTLTQLLEFAKTVERERERDD-NLEVESPRHSKKQRGNYVRRKGTGYNRKGSASLPDVTAISGGADGDEKRN
        MD YPLHMAMAALIGASVVAVSAYYMHRKTLTQLLEFAKTVER+RERDD NL+VESPRHSKKQRGN+VRRKGTGYNR+ SASLPDVTAISG ADGD+KRN
Subjt:  MDTYPLHMAMAALIGASVVAVSAYYMHRKTLTQLLEFAKTVERERERDD-NLEVESPRHSKKQRGNYVRRKGTGYNRKGSASLPDVTAISGGADGDEKRN

Query:  GQVLLDVIPAGLPRLHTLPEGMDS
        GQVLLDVIPAGLPRLHTLPEG +S
Subjt:  GQVLLDVIPAGLPRLHTLPEGMDS

A0A5A7UWP2 AMP deaminase

2.4e-53

91.13

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Query:  MDTYPLHMAMAALIGASVVAVSAYYMHRKTLTQLLEFAKTVERERERDD-NLEVESPRHSKKQRGNYVRRKGTGYNRKGSASLPDVTAISGGADGDEKRN
        MD YPLHMAMAALIGASVVAVSAYYMHRKTLTQLLEFAKTVER+RERDD NL+VESPRHSKKQRGN+VRRKGTGYNR+ SASLPDVTAISG ADGD+KRN
Subjt:  MDTYPLHMAMAALIGASVVAVSAYYMHRKTLTQLLEFAKTVERERERDD-NLEVESPRHSKKQRGNYVRRKGTGYNRKGSASLPDVTAISGGADGDEKRN

Query:  GQVLLDVIPAGLPRLHTLPEGMDS
        GQVLLDVIPAGLPRLHTLPEG +S
Subjt:  GQVLLDVIPAGLPRLHTLPEGMDS

A0A6J1GDJ9 AMP deaminase

8.3e-54

92.68

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Query:  MDTYPLHMAMAALIGASVVAVSAYYMHRKTLTQLLEFAKTVERERERDDNLEVESPRHSKKQRGNYVRRKGTGYNRKGSASLPDVTAISGGADGDEKRNG
        MDTYPLHMAMAALIGASVVAVSAYYMHRKTLTQLLEFAKTVERERERDDNLEV+SP+HSKKQRG +VRRKG GYNR+GSASLPDVTAISGG DGDEKRNG
Subjt:  MDTYPLHMAMAALIGASVVAVSAYYMHRKTLTQLLEFAKTVERERERDDNLEVESPRHSKKQRGNYVRRKGTGYNRKGSASLPDVTAISGGADGDEKRNG

Query:  QVLLDVIPAGLPRLHTLPEGMDS
        QVLLDVIPAGLPRLHTLPEG +S
Subjt:  QVLLDVIPAGLPRLHTLPEGMDS

A0A6J1IT55 AMP deaminase

9.2e-53

91.06

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Query:  MDTYPLHMAMAALIGASVVAVSAYYMHRKTLTQLLEFAKTVERERERDDNLEVESPRHSKKQRGNYVRRKGTGYNRKGSASLPDVTAISGGADGDEKRNG
        MDTYPLHMAMAALIGAS VAVSAYYMHRKTLTQLLEFAKTVERERER+DNLEV+SP+HSKKQRG +VRRKG GYNR+GSASLPDVTAISGG DGDEKRNG
Subjt:  MDTYPLHMAMAALIGASVVAVSAYYMHRKTLTQLLEFAKTVERERERDDNLEVESPRHSKKQRGNYVRRKGTGYNRKGSASLPDVTAISGGADGDEKRNG

Query:  QVLLDVIPAGLPRLHTLPEGMDS
        QVLLDVIPAGLPRLHTLPEG +S
Subjt:  QVLLDVIPAGLPRLHTLPEGMDS

SwissProt top hits

e value

%identity

Alignment

O80452 AMP deaminase

6.8e-13

43.65

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Query:  MAMAALIGASVVAVSAYYMHRKTLTQLLEFAKTVERERERDDNLEVESPRH-SKKQRGNYVRRKGTGYNRKGSASLPDVTAIS---GGADGDEKR-NGQV
        +A+AAL GAS VAVS ++MH K L  +L      ER +ER +N + + P++ +  +R + VRRK      +  ASLPD T  +   GG  GD  R NG V
Subjt:  MAMAALIGASVVAVSAYYMHRKTLTQLLEFAKTVERERERDDNLEVESPRH-SKKQRGNYVRRKGTGYNRKGSASLPDVTAIS---GGADGDEKR-NGQV

Query:  LLDVIPAGLPRLHTLPEGMDSMDFSS
         +D IP GLPRLHT  EG  S+  +S
Subjt:  LLDVIPAGLPRLHTLPEGMDSMDFSS

Q84NP7 Probable AMP deaminase

8.7e-08

50.79

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Query:  TYPLHMAMAALIGASVVAVSAYYMHRKTLTQLLEFAKTVERERER--------DDNLEVESPR
        TY LH+A+A L+GAS  A SAYYMHRKTL QLL FA++++R+  R        DD+ + + PR
Subjt:  TYPLHMAMAALIGASVVAVSAYYMHRKTLTQLLEFAKTVERERER--------DDNLEVESPR

Arabidopsis top hits

e value

%identity

Alignment

AT2G38280.1 AMP deaminase, putative / myoadenylate deaminase, putative

4.9e-14

43.65

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Query:  MAMAALIGASVVAVSAYYMHRKTLTQLLEFAKTVERERERDDNLEVESPRH-SKKQRGNYVRRKGTGYNRKGSASLPDVTAIS---GGADGDEKR-NGQV
        +A+AAL GAS VAVS ++MH K L  +L      ER +ER +N + + P++ +  +R + VRRK      +  ASLPD T  +   GG  GD  R NG V
Subjt:  MAMAALIGASVVAVSAYYMHRKTLTQLLEFAKTVERERERDDNLEVESPRH-SKKQRGNYVRRKGTGYNRKGSASLPDVTAIS---GGADGDEKR-NGQV

Query:  LLDVIPAGLPRLHTLPEGMDSMDFSS
         +D IP GLPRLHT  EG  S+  +S
Subjt:  LLDVIPAGLPRLHTLPEGMDSMDFSS

AT2G38280.2 AMP deaminase, putative / myoadenylate deaminase, putative

4.9e-14

43.65

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Query:  MAMAALIGASVVAVSAYYMHRKTLTQLLEFAKTVERERERDDNLEVESPRH-SKKQRGNYVRRKGTGYNRKGSASLPDVTAIS---GGADGDEKR-NGQV
        +A+AAL GAS VAVS ++MH K L  +L      ER +ER +N + + P++ +  +R + VRRK      +  ASLPD T  +   GG  GD  R NG V
Subjt:  MAMAALIGASVVAVSAYYMHRKTLTQLLEFAKTVERERERDDNLEVESPRH-SKKQRGNYVRRKGTGYNRKGSASLPDVTAIS---GGADGDEKR-NGQV

Query:  LLDVIPAGLPRLHTLPEGMDSMDFSS
         +D IP GLPRLHT  EG  S+  +S
Subjt:  LLDVIPAGLPRLHTLPEGMDSMDFSS

Sequences

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CDS sequence

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ATGGATACTTATCCGTTGCACATGGCCATGGCGGCTCTGATAGGAGCCTCCGTCGTCGCTGTTTCGGCGTATTATATGCACCGGAAAACCCTAACTCAGCTGCTGGAGTT
TGCCAAGACTGTGGAGAGAGAAAGGGAGCGGGACGATAATTTGGAGGTTGAGTCGCCGAGGCATTCCAAGAAGCAGCGTGGAAATTATGTGCGGCGGAAAGGGACCGGTT
ACAATCGGAAGGGCTCCGCTTCGTTGCCGGATGTCACTGCTATTTCCGGTGGGGCTGATGGCGACGAGAAGCGAAATGGACAGGTACTGTTGGACGTGATTCCGGCAGGG
CTGCCGAGGTTACACACACTCCCTGAAGGTATGGATTCAATGGATTTCTCTTCTGGAGATTCATGGACTTTGAATGCATAA

mRNA sequence

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Protein sequence

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MDTYPLHMAMAALIGASVVAVSAYYMHRKTLTQLLEFAKTVERERERDDNLEVESPRHSKKQRGNYVRRKGTGYNRKGSASLPDVTAISGGADGDEKRNGQVLLDVIPAG
LPRLHTLPEGMDSMDFSSGDSWTLNA

Lsi01G015530 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome