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Lsi01G015550 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G015550
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionprotein EMB-1
Genome locationchr01:13744257..13745462
RNA-Seq ExpressionLsi01G015550
SyntenyLsi01G015550
Gene Ontology termsGO:0009737 - response to abscisic acid (biological process)
GO:0048700 - acquisition of desiccation tolerance in seed (biological process)
InterPro domainsIPR000389 - Small hydrophilic plant seed protein
IPR022377 - Small hydrophilic plant seed protein, conserved site
IPR038956 - Late embryogenesis abundant protein, LEA_5 subgroup


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7033764.1 Em-like protein GEA1, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-4095.79Show/hide
Query:  KKREMSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNTGMPGGERAAEEGVEIDESKFKTK
        K+REMSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSN+GMPGGERAAEEGVEIDESKF+ K
Subjt:  KKREMSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNTGMPGGERAAEEGVEIDESKFKTK

XP_004148611.1 protein EMB-1 [Cucumis sativus]9.5e-3793.41Show/hide
Query:  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNTGMPGGERAAEEGVEIDESKFKTK
        MSSEQER +LDARARQGETV+PGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNTGM GGERAAEEGVEIDESKF+ K
Subjt:  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNTGMPGGERAAEEGVEIDESKFKTK

XP_008464209.1 PREDICTED: protein EMB-1-like [Cucumis melo]1.5e-3796.7Show/hide
Query:  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNTGMPGGERAAEEGVEIDESKFKTK
        MSSEQER ELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNTGM GGERAAEEGVEIDESKF TK
Subjt:  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNTGMPGGERAAEEGVEIDESKFKTK

XP_022144068.1 protein EMB-1-like [Momordica charantia]1.3e-3895.6Show/hide
Query:  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNTGMPGGERAAEEGVEIDESKFKTK
        MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQ+MGRKGGLSNTG+ GGERAAEEGVEIDESKF+TK
Subjt:  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNTGMPGGERAAEEGVEIDESKFKTK

XP_022949998.1 protein EMB-1 [Cucurbita moschata]3.5e-3996.7Show/hide
Query:  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNTGMPGGERAAEEGVEIDESKFKTK
        MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSN+GMPGGERAAEEGVEIDESKF+ K
Subjt:  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNTGMPGGERAAEEGVEIDESKFKTK

TrEMBL top hitse value%identityAlignment
A0A1S3CKY4 protein EMB-1-like7.1e-3896.7Show/hide
Query:  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNTGMPGGERAAEEGVEIDESKFKTK
        MSSEQER ELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNTGM GGERAAEEGVEIDESKF TK
Subjt:  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNTGMPGGERAAEEGVEIDESKFKTK

A0A5D3E041 Protein EMB-1-like7.1e-3896.7Show/hide
Query:  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNTGMPGGERAAEEGVEIDESKFKTK
        MSSEQER ELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNTGM GGERAAEEGVEIDESKF TK
Subjt:  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNTGMPGGERAAEEGVEIDESKFKTK

A0A6J1CSC5 protein EMB-1-like6.4e-3995.6Show/hide
Query:  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNTGMPGGERAAEEGVEIDESKFKTK
        MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQ+MGRKGGLSNTG+ GGERAAEEGVEIDESKF+TK
Subjt:  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNTGMPGGERAAEEGVEIDESKFKTK

A0A6J1GDN9 protein EMB-11.7e-3996.7Show/hide
Query:  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNTGMPGGERAAEEGVEIDESKFKTK
        MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSN+GMPGGERAAEEGVEIDESKF+ K
Subjt:  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNTGMPGGERAAEEGVEIDESKFKTK

A0A6J1ISS4 protein EMB-11.7e-3996.7Show/hide
Query:  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNTGMPGGERAAEEGVEIDESKFKTK
        MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSN+GMPGGERAAEEGVEIDESKF+ K
Subjt:  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNTGMPGGERAAEEGVEIDESKFKTK

SwissProt top hitse value%identityAlignment
P17639 Protein EMB-11.6e-3482.42Show/hide
Query:  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNTGMPGGERAAEEGVEIDESKFKTK
        M+S+QE+ ELDARARQGETVVPGGTGGKSLEAQ+HLAEGRS+GGQTRKEQLG EGY EMGRKGGLSN  M GGERA +EG++IDESKF+TK
Subjt:  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNTGMPGGERAAEEGVEIDESKFKTK

P42755 Em protein H51.9e-3281.11Show/hide
Query:  SSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNTGMPGGERAAEEGVEIDESKFKTK
        S +QER ELD  AR+GETVVPGGTGGKSLEAQEHLA+GRSRGG+TRKEQLG EGY+EMGRKGGLS     GGERAA EG+EIDESKFKTK
Subjt:  SSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNTGMPGGERAAEEGVEIDESKFKTK

Q02973 Em-like protein GEA61.9e-3279.12Show/hide
Query:  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNTGMPGGERAAEEGVEIDESKFKTK
        M+S+QE+ +LD RA++GETVVPGGTGGKS EAQ+HLAEGRSRGGQTRKEQLG EGYQ+MGRKGGLS    PGGE A EEGVEIDESKF+TK
Subjt:  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNTGMPGGERAAEEGVEIDESKFKTK

Q05190 Late embryogenesis abundant protein B19.1A2.8e-3176.67Show/hide
Query:  SSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNTGMPGGERAAEEGVEIDESKFKTK
        S +QER +LD +AR+GETVVPGGTGGKSLEAQ++LAEGRSRGGQTR+EQ+G EGY EMGRKGGLS+    GGERAA EG++IDESKFKTK
Subjt:  SSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNTGMPGGERAAEEGVEIDESKFKTK

Q40864 Em-like protein2.1e-3178.65Show/hide
Query:  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNTGMPGGERAAEEGVEIDESKFK
        M  +Q+R ELDA+AR+GETVVPGGTGGKSL+AQE LAEGRSRGGQTRKEQ+G EGYQEMGRKGGLS+ G PGGERA+EEG  IDESK++
Subjt:  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNTGMPGGERAAEEGVEIDESKFK

Arabidopsis top hitse value%identityAlignment
AT2G40170.1 Stress induced protein1.4e-3379.12Show/hide
Query:  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNTGMPGGERAAEEGVEIDESKFKTK
        M+S+QE+ +LD RA++GETVVPGGTGGKS EAQ+HLAEGRSRGGQTRKEQLG EGYQ+MGRKGGLS    PGGE A EEGVEIDESKF+TK
Subjt:  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNTGMPGGERAAEEGVEIDESKFKTK

AT3G51810.1 Stress induced protein7.5e-2447.33Show/hide
Query:  SSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQ--------------------------------------------
        S +  R ELD +A+QGETVVPGGTGG SLEAQEHLAEGRS+GGQTRKEQLGHEGYQ                                            
Subjt:  SSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQ--------------------------------------------

Query:  ----------------EMGRKGGLSNTGMPGGERAAEEGVEIDESKFKTK
                        EMGRKGGLS     GGERA EEG+EIDESKF  K
Subjt:  ----------------EMGRKGGLSNTGMPGGERAAEEGVEIDESKFKTK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGACAAGAAGAGACGGACATAGAATCATTTTTTATTATCAAAGCTAAGTATTTGAAAAGAGTTAAAAAAAGAGAGATGTCGTCGGAGCAGGAAAGATGTGAGCTGGACGC
CAGGGCCAGGCAAGGGGAGACTGTCGTCCCCGGTGGAACTGGGGGCAAGAGTCTCGAAGCTCAGGAGCACCTCGCTGAAGGGCGGAGCCGTGGGGGCCAGACAAGGAAGG
AGCAGCTGGGACACGAAGGGTACCAAGAGATGGGCCGTAAAGGAGGGCTCAGCAACACAGGTATGCCTGGAGGAGAGCGTGCTGCTGAGGAAGGGGTTGAAATTGACGAA
TCCAAGTTCAAGACTAAATAA
mRNA sequenceShow/hide mRNA sequence
GGACAAGAAGAGACGGACATAGAATCATTTTTTATTATCAAAGCTAAGTATTTGAAAAGAGTTAAAAAAAGAGAGATGTCGTCGGAGCAGGAAAGATGTGAGCTGGACGC
CAGGGCCAGGCAAGGGGAGACTGTCGTCCCCGGTGGAACTGGGGGCAAGAGTCTCGAAGCTCAGGAGCACCTCGCTGAAGGGCGGAGCCGTGGGGGCCAGACAAGGAAGG
AGCAGCTGGGACACGAAGGGTACCAAGAGATGGGCCGTAAAGGAGGGCTCAGCAACACAGGTATGCCTGGAGGAGAGCGTGCTGCTGAGGAAGGGGTTGAAATTGACGAA
TCCAAGTTCAAGACTAAATAA
Protein sequenceShow/hide protein sequence
GQEETDIESFFIIKAKYLKRVKKREMSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQEMGRKGGLSNTGMPGGERAAEEGVEIDE
SKFKTK