; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi01G015560 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G015560
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionLate embryogenesis abundant protein B19.3
Genome locationchr01:13747004..13748039
RNA-Seq ExpressionLsi01G015560
SyntenyLsi01G015560
Gene Ontology termsGO:0009737 - response to abscisic acid (biological process)
InterPro domainsIPR000389 - Small hydrophilic plant seed protein
IPR022377 - Small hydrophilic plant seed protein, conserved site
IPR038956 - Late embryogenesis abundant protein, LEA_5 subgroup


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK29241.1 protein SLE1 [Cucumis melo var. makuwa]1.1e-4180.65Show/hide
Query:  MASQQERSELDAKAKQGETVVPGGTGGKSLEAQERLAEEYSKISDDIRVSRSRGGQTRREQLGQEGYQELGHQGGEARREQMGHEGYQEMGRKGGLSTME
        MASQQ+RSELDAKAKQGETVVPGGTGGKSL+AQERLAE            RS+GGQTR+EQLG EGYQELGHQGGEAR+EQMG EGYQEMGRKGGLSTM+
Subjt:  MASQQERSELDAKAKQGETVVPGGTGGKSLEAQERLAEEYSKISDDIRVSRSRGGQTRREQLGQEGYQELGHQGGEARREQMGHEGYQEMGRKGGLSTME

Query:  KSGGERAAEEGIEIDESKFRTKDR
        KSGGERA EEGIEIDES+F TK+R
Subjt:  KSGGERAAEEGIEIDESKFRTKDR

XP_008464211.1 PREDICTED: protein SLE1 [Cucumis melo]2.3e-4179.84Show/hide
Query:  MASQQERSELDAKAKQGETVVPGGTGGKSLEAQERLAEEYSKISDDIRVSRSRGGQTRREQLGQEGYQELGHQGGEARREQMGHEGYQEMGRKGGLSTME
        MASQQ+RSELDAKAKQGETVVPGGTGGKSL+AQERLAE            RS+GGQTR+EQLG EGY+ELGHQGGEAR+EQMG EGYQEMGRKGGLSTM+
Subjt:  MASQQERSELDAKAKQGETVVPGGTGGKSLEAQERLAEEYSKISDDIRVSRSRGGQTRREQLGQEGYQELGHQGGEARREQMGHEGYQEMGRKGGLSTME

Query:  KSGGERAAEEGIEIDESKFRTKDR
        KSGGERA EEGIEIDES+F TK+R
Subjt:  KSGGERAAEEGIEIDESKFRTKDR

XP_022949995.1 carrot ABA-induced in somatic embryos 3 [Cucurbita moschata]1.5e-4079.03Show/hide
Query:  MASQQERSELDAKAKQGETVVPGGTGGKSLEAQERLAEEYSKISDDIRVSRSRGGQTRREQLGQEGYQELGHQGGEARREQMGHEGYQEMGRKGGLSTME
        MA+QQERSEL+AKAKQGETVVPGGTGGKSLEAQERLAE            RSRGGQTR+EQLG EGYQE+GH+GGE RREQMG EGYQEMG+KGGLSTM+
Subjt:  MASQQERSELDAKAKQGETVVPGGTGGKSLEAQERLAEEYSKISDDIRVSRSRGGQTRREQLGQEGYQELGHQGGEARREQMGHEGYQEMGRKGGLSTME

Query:  KSGGERAAEEGIEIDESKFRTKDR
        KS  ER  EEGIEIDESKFRTKDR
Subjt:  KSGGERAAEEGIEIDESKFRTKDR

XP_022978321.1 carrot ABA-induced in somatic embryos 3 [Cucurbita maxima]2.0e-4079.03Show/hide
Query:  MASQQERSELDAKAKQGETVVPGGTGGKSLEAQERLAEEYSKISDDIRVSRSRGGQTRREQLGQEGYQELGHQGGEARREQMGHEGYQEMGRKGGLSTME
        MA+QQERSEL+AKAKQGETVVPGGTGGKSLEAQERLAE            RSRGGQTR+EQLG EGYQE+GH+GGE RREQMG EGYQEMG+KGGLSTM+
Subjt:  MASQQERSELDAKAKQGETVVPGGTGGKSLEAQERLAEEYSKISDDIRVSRSRGGQTRREQLGQEGYQELGHQGGEARREQMGHEGYQEMGRKGGLSTME

Query:  KSGGERAAEEGIEIDESKFRTKDR
        KS  ER  EEGIEIDESKFRTKDR
Subjt:  KSGGERAAEEGIEIDESKFRTKDR

XP_038883209.1 protein SLE1-like [Benincasa hispida]2.4e-4687.9Show/hide
Query:  MASQQERSELDAKAKQGETVVPGGTGGKSLEAQERLAEEYSKISDDIRVSRSRGGQTRREQLGQEGYQELGHQGGEARREQMGHEGYQEMGRKGGLSTME
        MASQQERSELDAKAKQGETVVPGGTGGKSLEAQERLAE            RSRGGQTR+EQLGQEGYQELGHQGGEARREQ+GHEGYQEMGRKGGLSTM+
Subjt:  MASQQERSELDAKAKQGETVVPGGTGGKSLEAQERLAEEYSKISDDIRVSRSRGGQTRREQLGQEGYQELGHQGGEARREQMGHEGYQEMGRKGGLSTME

Query:  KSGGERAAEEGIEIDESKFRTKDR
        KSGGERAAEEGIEIDESKFRTKDR
Subjt:  KSGGERAAEEGIEIDESKFRTKDR

TrEMBL top hitse value%identityAlignment
A0A1S3CMG8 protein SLE11.1e-4179.84Show/hide
Query:  MASQQERSELDAKAKQGETVVPGGTGGKSLEAQERLAEEYSKISDDIRVSRSRGGQTRREQLGQEGYQELGHQGGEARREQMGHEGYQEMGRKGGLSTME
        MASQQ+RSELDAKAKQGETVVPGGTGGKSL+AQERLAE            RS+GGQTR+EQLG EGY+ELGHQGGEAR+EQMG EGYQEMGRKGGLSTM+
Subjt:  MASQQERSELDAKAKQGETVVPGGTGGKSLEAQERLAEEYSKISDDIRVSRSRGGQTRREQLGQEGYQELGHQGGEARREQMGHEGYQEMGRKGGLSTME

Query:  KSGGERAAEEGIEIDESKFRTKDR
        KSGGERA EEGIEIDES+F TK+R
Subjt:  KSGGERAAEEGIEIDESKFRTKDR

A0A5A7T8F9 Protein SLE11.1e-4179.84Show/hide
Query:  MASQQERSELDAKAKQGETVVPGGTGGKSLEAQERLAEEYSKISDDIRVSRSRGGQTRREQLGQEGYQELGHQGGEARREQMGHEGYQEMGRKGGLSTME
        MASQQ+RSELDAKAKQGETVVPGGTGGKSL+AQERLAE            RS+GGQTR+EQLG EGY+ELGHQGGEAR+EQMG EGYQEMGRKGGLSTM+
Subjt:  MASQQERSELDAKAKQGETVVPGGTGGKSLEAQERLAEEYSKISDDIRVSRSRGGQTRREQLGQEGYQELGHQGGEARREQMGHEGYQEMGRKGGLSTME

Query:  KSGGERAAEEGIEIDESKFRTKDR
        KSGGERA EEGIEIDES+F TK+R
Subjt:  KSGGERAAEEGIEIDESKFRTKDR

A0A5D3E0M2 Protein SLE15.1e-4280.65Show/hide
Query:  MASQQERSELDAKAKQGETVVPGGTGGKSLEAQERLAEEYSKISDDIRVSRSRGGQTRREQLGQEGYQELGHQGGEARREQMGHEGYQEMGRKGGLSTME
        MASQQ+RSELDAKAKQGETVVPGGTGGKSL+AQERLAE            RS+GGQTR+EQLG EGYQELGHQGGEAR+EQMG EGYQEMGRKGGLSTM+
Subjt:  MASQQERSELDAKAKQGETVVPGGTGGKSLEAQERLAEEYSKISDDIRVSRSRGGQTRREQLGQEGYQELGHQGGEARREQMGHEGYQEMGRKGGLSTME

Query:  KSGGERAAEEGIEIDESKFRTKDR
        KSGGERA EEGIEIDES+F TK+R
Subjt:  KSGGERAAEEGIEIDESKFRTKDR

A0A6J1GDL3 carrot ABA-induced in somatic embryos 37.3e-4179.03Show/hide
Query:  MASQQERSELDAKAKQGETVVPGGTGGKSLEAQERLAEEYSKISDDIRVSRSRGGQTRREQLGQEGYQELGHQGGEARREQMGHEGYQEMGRKGGLSTME
        MA+QQERSEL+AKAKQGETVVPGGTGGKSLEAQERLAE            RSRGGQTR+EQLG EGYQE+GH+GGE RREQMG EGYQEMG+KGGLSTM+
Subjt:  MASQQERSELDAKAKQGETVVPGGTGGKSLEAQERLAEEYSKISDDIRVSRSRGGQTRREQLGQEGYQELGHQGGEARREQMGHEGYQEMGRKGGLSTME

Query:  KSGGERAAEEGIEIDESKFRTKDR
        KS  ER  EEGIEIDESKFRTKDR
Subjt:  KSGGERAAEEGIEIDESKFRTKDR

A0A6J1IMD5 carrot ABA-induced in somatic embryos 39.6e-4179.03Show/hide
Query:  MASQQERSELDAKAKQGETVVPGGTGGKSLEAQERLAEEYSKISDDIRVSRSRGGQTRREQLGQEGYQELGHQGGEARREQMGHEGYQEMGRKGGLSTME
        MA+QQERSEL+AKAKQGETVVPGGTGGKSLEAQERLAE            RSRGGQTR+EQLG EGYQE+GH+GGE RREQMG EGYQEMG+KGGLSTM+
Subjt:  MASQQERSELDAKAKQGETVVPGGTGGKSLEAQERLAEEYSKISDDIRVSRSRGGQTRREQLGQEGYQELGHQGGEARREQMGHEGYQEMGRKGGLSTME

Query:  KSGGERAAEEGIEIDESKFRTKDR
        KS  ER  EEGIEIDESKFRTKDR
Subjt:  KSGGERAAEEGIEIDESKFRTKDR

SwissProt top hitse value%identityAlignment
I1N2Z5 Protein SLE11.8e-3672.73Show/hide
Query:  MASQQ-ERSELDAKAKQGETVVPGGTGGKSLEAQERLAEEYSKISDDIRVSRSRGGQTRREQLGQEGYQELGHQGGEARREQMGHEGYQEMGRKGGLSTM
        M SQQ  R ELD KA+QGETVVPGGTGGKSLEAQE LAE            RSRGGQTR++QLG EGY E+G +GG+ R+EQMG EGYQEMGRKGGLSTM
Subjt:  MASQQ-ERSELDAKAKQGETVVPGGTGGKSLEAQERLAEEYSKISDDIRVSRSRGGQTRREQLGQEGYQELGHQGGEARREQMGHEGYQEMGRKGGLSTM

Query:  EKSGGERAAEEGIEIDESKFR
        +KSGGERA EEGIEIDESKF+
Subjt:  EKSGGERAAEEGIEIDESKFR

Q02400 Late embryogenesis abundant protein B19.33.6e-3766.15Show/hide
Query:  ASQQERSELDAKAKQGETVVPGGTGGKSLEAQERLAEEYSK---------ISDDIRVSRSRGGQTRREQLGQEGYQELGHQGGEARREQMGHEGYQEMGR
        + QQERSELD  A++GETVVPGGTGGK+LEAQE LAE  S+           +  R    +GG+TR+EQLG+EGY+E+GH+GGE R+EQMG EGY EMGR
Subjt:  ASQQERSELDAKAKQGETVVPGGTGGKSLEAQERLAEEYSK---------ISDDIRVSRSRGGQTRREQLGQEGYQELGHQGGEARREQMGHEGYQEMGR

Query:  KGGLSTMEKSGGERAAEEGIEIDESKFRTK
        KGGLSTME+SGGERAA EGI+IDESKF+TK
Subjt:  KGGLSTMEKSGGERAAEEGIEIDESKFRTK

Q05191 Late embryogenesis abundant protein B19.42.2e-3456.67Show/hide
Query:  ASQQERSELDAKAKQGETVVPGGTGGKSLEAQERLAEEYSK-----------------------------ISDDIRVSRSRGGQTRREQLGQEGYQELGH
        + QQERSELD  A++GETVVPGGTGGK+LEAQE LAE  S+                               +  R    +GG+TR+EQLG+EGY+E+GH
Subjt:  ASQQERSELDAKAKQGETVVPGGTGGKSLEAQERLAEEYSK-----------------------------ISDDIRVSRSRGGQTRREQLGQEGYQELGH

Query:  QGGEARREQMGHEGYQEMGRKGGLSTMEKSGGERAAEEGIEIDESKFRTK
        +GGE R+EQMG EGY+EMGRKGGLSTM +SGGERAA EGI+IDESKF+TK
Subjt:  QGGEARREQMGHEGYQEMGRKGGLSTMEKSGGERAAEEGIEIDESKFRTK

Q07187 Em-like protein GEA15.8e-3559.87Show/hide
Query:  MASQQ-ERSELDAKAKQGETVVPGGTGGKSLEAQERLAEEYSKIS-----------------------------DDIRVSRSRGGQTRREQLGQEGYQEL
        MAS+Q  R ELD KAKQGETVVPGGTGG SLEAQE LAE  SK                               +  +    +GG+ R+EQLG EGYQE+
Subjt:  MASQQ-ERSELDAKAKQGETVVPGGTGGKSLEAQERLAEEYSKIS-----------------------------DDIRVSRSRGGQTRREQLGQEGYQEL

Query:  GHQGGEARREQMGHEGYQEMGRKGGLSTMEKSGGERAAEEGIEIDESKFRTK
        GH+GGEAR+EQ+GHEGY+EMGRKGGLSTMEKSGGERA EEGIEIDESKF  K
Subjt:  GHQGGEARREQMGHEGYQEMGRKGGLSTMEKSGGERAAEEGIEIDESKFRTK

Q5KTS7 Carrot ABA-induced in somatic embryos 35.2e-3669.42Show/hide
Query:  ASQQERSELDAKAKQGETVVPGGTGGKSLEAQERLAEEYSKISDDIRVSRSRGGQTRREQLGQEGYQELGHQGGEARREQMGHEGYQEMGRKGGLSTMEK
        + Q++RSELDA+AKQGETVVPGGTGGKSLEAQE LAE            RS+GG TR+EQLG EGYQE+G +GGE RREQMG EGY++MGR GGL+T +K
Subjt:  ASQQERSELDAKAKQGETVVPGGTGGKSLEAQERLAEEYSKISDDIRVSRSRGGQTRREQLGQEGYQELGHQGGEARREQMGHEGYQEMGRKGGLSTMEK

Query:  SGGERAAEEGIEIDESKFRTK
        SG ERA EEGI+ID+SKFRTK
Subjt:  SGGERAAEEGIEIDESKFRTK

Arabidopsis top hitse value%identityAlignment
AT2G40170.1 Stress induced protein6.0e-2759.02Show/hide
Query:  MASQQERSELDAKAKQGETVVPGGTGGKSLEAQERLAEEYSKISDDIRVSRSRGGQTRREQLGQEGYQELGHQGGEARREQMGHEGYQEMGRKGGLSTME
        MASQQE+ +LD +AK+GETVVPGGTGGKS EAQ+ LAE            RSRGGQTR+EQLG                     EGYQ+MGRKGGLST +
Subjt:  MASQQERSELDAKAKQGETVVPGGTGGKSLEAQERLAEEYSKISDDIRVSRSRGGQTRREQLGQEGYQELGHQGGEARREQMGHEGYQEMGRKGGLSTME

Query:  KSGGERAAEEGIEIDESKFRTK
        K GGE A EEG+EIDESKFRTK
Subjt:  KSGGERAAEEGIEIDESKFRTK

AT3G51810.1 Stress induced protein4.1e-3659.87Show/hide
Query:  MASQQ-ERSELDAKAKQGETVVPGGTGGKSLEAQERLAEEYSKIS-----------------------------DDIRVSRSRGGQTRREQLGQEGYQEL
        MAS+Q  R ELD KAKQGETVVPGGTGG SLEAQE LAE  SK                               +  +    +GG+ R+EQLG EGYQE+
Subjt:  MASQQ-ERSELDAKAKQGETVVPGGTGGKSLEAQERLAEEYSKIS-----------------------------DDIRVSRSRGGQTRREQLGQEGYQEL

Query:  GHQGGEARREQMGHEGYQEMGRKGGLSTMEKSGGERAAEEGIEIDESKFRTK
        GH+GGEAR+EQ+GHEGY+EMGRKGGLSTMEKSGGERA EEGIEIDESKF  K
Subjt:  GHQGGEARREQMGHEGYQEMGRKGGLSTMEKSGGERAAEEGIEIDESKFRTK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATCGCAACAGGAAAGATCAGAGCTCGACGCTAAAGCTAAGCAGGGTGAGACTGTGGTTCCTGGCGGAACCGGCGGCAAAAGCCTTGAAGCTCAAGAACGTCTCGC
TGAAGAGTATTCAAAAATTTCAGATGATATCAGAGTAAGTCGAAGCCGGGGTGGGCAGACGAGGAGAGAACAATTGGGGCAGGAAGGGTATCAAGAGCTGGGGCACCAAG
GAGGAGAGGCAAGAAGAGAGCAGATGGGCCACGAAGGCTACCAAGAAATGGGTCGGAAAGGAGGGCTGAGCACCATGGAAAAGTCCGGTGGAGAGCGGGCCGCGGAGGAG
GGAATCGAGATCGATGAGTCCAAGTTCAGGACCAAGGACCGTTAA
mRNA sequenceShow/hide mRNA sequence
TATATATATACCATTGTCTGTAGAAATTTAAAAAAGAAATGGCATCGCAACAGGAAAGATCAGAGCTCGACGCTAAAGCTAAGCAGGGTGAGACTGTGGTTCCTGGCGGA
ACCGGCGGCAAAAGCCTTGAAGCTCAAGAACGTCTCGCTGAAGAGTATTCAAAAATTTCAGATGATATCAGAGTAAGTCGAAGCCGGGGTGGGCAGACGAGGAGAGAACA
ATTGGGGCAGGAAGGGTATCAAGAGCTGGGGCACCAAGGAGGAGAGGCAAGAAGAGAGCAGATGGGCCACGAAGGCTACCAAGAAATGGGTCGGAAAGGAGGGCTGAGCA
CCATGGAAAAGTCCGGTGGAGAGCGGGCCGCGGAGGAGGGAATCGAGATCGATGAGTCCAAGTTCAGGACCAAGGACCGTTAA
Protein sequenceShow/hide protein sequence
MASQQERSELDAKAKQGETVVPGGTGGKSLEAQERLAEEYSKISDDIRVSRSRGGQTRREQLGQEGYQELGHQGGEARREQMGHEGYQEMGRKGGLSTMEKSGGERAAEE
GIEIDESKFRTKDR