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Lsi01G015580 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G015580
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionProtein TIC 214
Genome locationchr01:13759749..13766970
RNA-Seq ExpressionLsi01G015580
SyntenyLsi01G015580
Gene Ontology termsGO:0015031 - protein transport (biological process)
GO:0009706 - chloroplast inner membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR008896 - Protein TIC214


Homology Show/hide homology
GenBank top hitse value%identityAlignment
DAD49786.1 TPA_asm: hypothetical protein HUJ06_000144 [Nelumbo nucifera]4.0e-0854.88Show/hide
Query:  LSRILSPIVTKKLK---ETEERGESKEEIDVEIETTSETKGLNKNK-------------RDPPKKILLLPFFGRKGGSGQNR
        L R+ SPI TKKLK   ETEERGES+EE DVEIETTSETKG  ++K              +  KK L LPF  +K  SGQNR
Subjt:  LSRILSPIVTKKLK---ETEERGESKEEIDVEIETTSETKGLNKNK-------------RDPPKKILLLPFFGRKGGSGQNR
KAF5961853.1 hypothetical protein HYC85_003062 [Camellia sinensis]2.6e-0746.25Show/hide
Query:  MKMNFGVSDNYLYDTVGQRIL-SRILSPIVTKKLKETEERGESKEEIDVEIETTSETKGLNKNKRDPPKKILLLPFFGRK
        + +  G  +N ++      IL SRI SPI+TK LKET +  E  +++       ++ +GLN+NKRDPPKKILLLPFFG+K
Subjt:  MKMNFGVSDNYLYDTVGQRIL-SRILSPIVTKKLKETEERGESKEEIDVEIETTSETKGLNKNKRDPPKKILLLPFFGRK
QTW92167.1 hypothetical protein RF1 [Quercus schottkyana]3.4e-0766.04Show/hide
Query:  LSRILSPIVTKKLKETEERGESKEEIDVEIETTSETKGLNKNKRDPPKKILLL
        L R+ SPIVTKKLKETEERGES+EE DVEIETTSETKG  + + +  ++ L L
Subjt:  LSRILSPIVTKKLKETEERGESKEEIDVEIETTSETKGLNKNKRDPPKKILLL
QYJ09122.1 Ycf1 [Staphylea holocarpa]1.3e-0960.81Show/hide
Query:  LSRILSPIVTKKLK---ETEERGESKEEIDVEIETTSETKGLNK-----NKRDPPKKILLLPFFGRKGGSGQNR
        L RI SPI+TKKLK   ETEERGES+EE D+EIETTSET+G  +      + DP   +    FFGRKGGSGQNR
Subjt:  LSRILSPIVTKKLK---ETEERGESKEEIDVEIETTSETKGLNK-----NKRDPPKKILLLPFFGRKGGSGQNR
YP_009973545.1 hypothetical chloroplast RF19 [Oxalis corniculata]3.2e-1378.33Show/hide
Query:  LSRILSPIVTKKLKETEERGESKEEIDVEIETTSETKGL-NKNKRDPPKKILLLPFFGRK
        L R+ SPI TKKLKETEERGES+EE DVEIETTSE+K L N NKR+PPKKILLLPFF +K
Subjt:  LSRILSPIVTKKLKETEERGESKEEIDVEIETTSETKGL-NKNKRDPPKKILLLPFFGRK
TrEMBL top hitse value%identityAlignment
A0A2S1P484 Hypothetical chloroplast RF192.2e-0781.4Show/hide
Query:  LSRILSPIVTKKLKETEERGESKEEIDVEIETTSETKGLNKNK
        L RI SPIVTKKLKETEERGESKEE DVEIETTSETKG  + +
Subjt:  LSRILSPIVTKKLKETEERGESKEEIDVEIETTSETKGLNKNK
A0A6C0ME96 Protein TIC 2142.2e-0759.32Show/hide
Query:  LSRILSPIVTKKLKETEERGESKEEIDVEIETTSETKGLNKNKRDPPKKILLLPFFGRK
        L R+ SPIVTKKLKETEERGES+EE DVEIETTSETKG  + + +  ++   L  F  +
Subjt:  LSRILSPIVTKKLKETEERGESKEEIDVEIETTSETKGLNKNKRDPPKKILLLPFFGRK
A0A6N2KR00 Uncharacterized protein2.2e-1276.79Show/hide
Query:  ILSPIVTKKLKETEERGESKEEIDVEIETTSETKGLNKNKRDPPKKILLLPFFGRK
        I SPI TKKLKET E  E +EE DVEIETT ETKGLN+NKRDPPKKILLLP F +K
Subjt:  ILSPIVTKKLKETEERGESKEEIDVEIETTSETKGLNKNKRDPPKKILLLPFFGRK
A0A7G7YES6 Protein TIC 2141.5e-1378.33Show/hide
Query:  LSRILSPIVTKKLKETEERGESKEEIDVEIETTSETKGL-NKNKRDPPKKILLLPFFGRK
        L R+ SPI TKKLKETEERGES+EE DVEIETTSE+K L N NKR+PPKKILLLPFF +K
Subjt:  LSRILSPIVTKKLKETEERGESKEEIDVEIETTSETKGL-NKNKRDPPKKILLLPFFGRK
A0A7J7IA43 Protein TIC 2141.3e-0746.25Show/hide
Query:  MKMNFGVSDNYLYDTVGQRIL-SRILSPIVTKKLKETEERGESKEEIDVEIETTSETKGLNKNKRDPPKKILLLPFFGRK
        + +  G  +N ++      IL SRI SPI+TK LKET +  E  +++       ++ +GLN+NKRDPPKKILLLPFFG+K
Subjt:  MKMNFGVSDNYLYDTVGQRIL-SRILSPIVTKKLKETEERGESKEEIDVEIETTSETKGLNKNKRDPPKKILLLPFFGRK
SwissProt top hitse value%identityAlignment
A6MMG9 Protein TIC 2143.6e-0771.74Show/hide
Query:  LSRILSPIVTKKLK---ETEERGESKEEIDVEIETTSETKGLNKNK
        L RI SPIVTKKLK   ETEE GES+EE DVEIETTSET+G  K +
Subjt:  LSRILSPIVTKKLK---ETEERGESKEEIDVEIETTSETKGLNKNK
Q06GT8 Protein TIC 2147.2e-0873.91Show/hide
Query:  LSRILSPIVTKKLK---ETEERGESKEEIDVEIETTSETKGLNKNK
        L RI SPIVTKKLK   ETEERGES+EE DVEIETTSETKG  + +
Subjt:  LSRILSPIVTKKLK---ETEERGESKEEIDVEIETTSETKGLNKNK
Q09FQ2 Protein TIC 2143.6e-0765.38Show/hide
Query:  LSRILSPIVTKKLKE---TEERGESKEEIDVEIETTSETKGLNKNKRDPPKK
        L RI SPIVTKKLKE   TEER ES+EE DVEIETTSETKG  + +    +K
Subjt:  LSRILSPIVTKKLKE---TEERGESKEEIDVEIETTSETKGLNKNKRDPPKK
Q0G9G1 Protein TIC 2141.2e-0773.91Show/hide
Query:  LSRILSPIVTKKLK---ETEERGESKEEIDVEIETTSETKGLNKNK
        L RI SPIVTKKLK   ETEERGES EE DVEIETTSETKG  + +
Subjt:  LSRILSPIVTKKLK---ETEERGESKEEIDVEIETTSETKGLNKNK
Q70XV6 Protein TIC 2144.6e-0769.77Show/hide
Query:  LSRILSPIVTKKLKETEERGESKEEIDVEIETTSETKGLNKNK
        L RI SPI TKKLKET E GE++EE DVEIE TSETKG  + K
Subjt:  LSRILSPIVTKKLKETEERGESKEEIDVEIETTSETKGLNKNK
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAATGAATTTTGGTGTCTCTGACAATTATTTGTATGATACTGTGGGTCAAAGAATTCTCAGCAGAATACTGTCACCCATTGTTACTAAGAAACTGAAAGAAACGGA
GGAAAGGGGGGAAAGCAAGGAAGAAATAGATGTAGAAATAGAAACCACTTCCGAAACGAAGGGACTAAACAAGAACAAGAGGGATCCACCGAAGAAGATACTTCTCCTTC
CCTTTTTCGGAAGAAAAGGAGGATCCGGACAAAATCGATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAAATGAATTTTGGTGTCTCTGACAATTATTTGTATGATACTGTGGGTCAAAGAATTCTCAGCAGAATACTGTCACCCATTGTTACTAAGAAACTGAAAGAAACGGA
GGAAAGGGGGGAAAGCAAGGAAGAAATAGATGTAGAAATAGAAACCACTTCCGAAACGAAGGGACTAAACAAGAACAAGAGGGATCCACCGAAGAAGATACTTCTCCTTC
CCTTTTTCGGAAGAAAAGGAGGATCCGGACAAAATCGATGA
Protein sequenceShow/hide protein sequence
MKMNFGVSDNYLYDTVGQRILSRILSPIVTKKLKETEERGESKEEIDVEIETTSETKGLNKNKRDPPKKILLLPFFGRKGGSGQNR