; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi01G015620 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G015620
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionPyruvate decarboxylase
Genome locationchr01:13821598..13824171
RNA-Seq ExpressionLsi01G015620
SyntenyLsi01G015620
Gene Ontology termsGO:0000287 - magnesium ion binding (molecular function)
GO:0004737 - pyruvate decarboxylase activity (molecular function)
GO:0030976 - thiamine pyrophosphate binding (molecular function)
InterPro domainsIPR012110 - Thiamine pyrophosphate (TPP)-dependent enzyme
IPR029061 - Thiamin diphosphate-binding fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595413.1 Pyruvate decarboxylase 1, partial [Cucurbita argyrosperma subsp. sororia]2.2e-4072.03Show/hide
Query:  EMGPQDVSTMLRLKQKNIIFLINNGGYTIEVELHDGPYNVIKNWDYTALVQ---------------TEEELMKAIETAMGDQKDCLCFIEAIVHRDDTSK
        +M PQ+VSTM++L QKNIIFLINNGGYTIEVELHDGPYNVIKNWDYTA+V                TEEEL+ A+ETAMGD+ DCLCFIE IVHRDDTSK
Subjt:  EMGPQDVSTMLRLKQKNIIFLINNGGYTIEVELHDGPYNVIKNWDYTALVQ---------------TEEELMKAIETAMGDQKDCLCFIEAIVHRDDTSK

Query:  ELLEFGNKLVAMGNRPPK
        ELLEFGNKLVA   RPP+
Subjt:  ELLEFGNKLVAMGNRPPK

XP_022144025.1 pyruvate decarboxylase 2-like, partial [Momordica charantia]1.7e-4072.03Show/hide
Query:  EMGPQDVSTMLRLKQKNIIFLINNGGYTIEVELHDGPYNVIKNWDYTAL---------------VQTEEELMKAIETAMGDQKDCLCFIEAIVHRDDTSK
        +M PQD+STMLRL Q+NIIFLINNGGYTIEVE+HDGPYNVIKNWDYTAL               V+TEEEL+KAI+ AMG++ DCLCFIE IVHRDDTSK
Subjt:  EMGPQDVSTMLRLKQKNIIFLINNGGYTIEVELHDGPYNVIKNWDYTAL---------------VQTEEELMKAIETAMGDQKDCLCFIEAIVHRDDTSK

Query:  ELLEFGNKLVAMGNRPPK
        ELLEFGNKL A+ +RPPK
Subjt:  ELLEFGNKLVAMGNRPPK

XP_022931872.1 pyruvate decarboxylase 1-like [Cucurbita moschata]2.2e-4072.03Show/hide
Query:  EMGPQDVSTMLRLKQKNIIFLINNGGYTIEVELHDGPYNVIKNWDYTALVQ---------------TEEELMKAIETAMGDQKDCLCFIEAIVHRDDTSK
        +M PQ+VSTM++L QKNIIFLINNGGYTIEVELHDGPYNVIKNWDYTA+V                TEEEL+ A+ETAMGD+ DCLCFIE IVHRDDTSK
Subjt:  EMGPQDVSTMLRLKQKNIIFLINNGGYTIEVELHDGPYNVIKNWDYTALVQ---------------TEEELMKAIETAMGDQKDCLCFIEAIVHRDDTSK

Query:  ELLEFGNKLVAMGNRPPK
        ELLEFGNKLVA   RPP+
Subjt:  ELLEFGNKLVAMGNRPPK

XP_038881468.1 pyruvate decarboxylase 1-like isoform X2 [Benincasa hispida]2.4e-4273.55Show/hide
Query:  EMGPQDVSTMLRLKQKNIIFLINNGGYTIEVELHDGPYNVIKNWDYTAL---------------VQTEEELMKAIETAMGDQKDCLCFIEAIVHRDDTSK
        +M PQDVSTMLRLKQ+NIIFLINNGGYTIEVELHDGPYN+IKNWDYTAL               VQTEEEL+ AIETAMGD+ +CLCFIEAIVHRDDTSK
Subjt:  EMGPQDVSTMLRLKQKNIIFLINNGGYTIEVELHDGPYNVIKNWDYTAL---------------VQTEEELMKAIETAMGDQKDCLCFIEAIVHRDDTSK

Query:  ELLEFGNKLVAMGNRPPKSAL
        ELL+ GNKL A+ +RPPK  L
Subjt:  ELLEFGNKLVAMGNRPPKSAL

XP_038882338.1 pyruvate decarboxylase 1-like, partial [Benincasa hispida]3.4e-4174.36Show/hide
Query:  EMGPQDVSTMLRLKQKNIIFLINNGGYTIEVELHDGPYNVIKNWDYTAL---------------VQTEEELMKAIETAMGDQKDCLCFIEAIVHRDDTSK
        +M PQD+STMLRL Q+NIIFLINNGGYTIEVE+HDGPYNVIKNWDYTAL               VQTEEEL+KAIE A GD+KDCLCFIEAIVH+DDTSK
Subjt:  EMGPQDVSTMLRLKQKNIIFLINNGGYTIEVELHDGPYNVIKNWDYTAL---------------VQTEEELMKAIETAMGDQKDCLCFIEAIVHRDDTSK

Query:  ELLEFGNKLVAMGNRPP
        ELLEFGNKL A+ +RPP
Subjt:  ELLEFGNKLVAMGNRPP

TrEMBL top hitse value%identityAlignment
A0A0A0KZZ6 Pyruvate decarboxylase5.4e-4071.43Show/hide
Query:  EMGPQDVSTMLRLKQKNIIFLINNGGYTIEVELHDGPYNVIKNWDYTAL---------------VQTEEELMKAIETAMGDQKDCLCFIEAIVHRDDTSK
        +M PQD+STMLRL Q+NIIFLINNGGYTIEVE+HDGPYN+IKNWDY AL               VQTEE+L+KAIE A  D  DCLCFIEAIVHRDDTSK
Subjt:  EMGPQDVSTMLRLKQKNIIFLINNGGYTIEVELHDGPYNVIKNWDYTAL---------------VQTEEELMKAIETAMGDQKDCLCFIEAIVHRDDTSK

Query:  ELLEFGNKLVAMGNRPPKS
        ELLEFGNKL  M +RPPKS
Subjt:  ELLEFGNKLVAMGNRPPKS

A0A6J1CQH4 Pyruvate decarboxylase8.3e-4172.03Show/hide
Query:  EMGPQDVSTMLRLKQKNIIFLINNGGYTIEVELHDGPYNVIKNWDYTAL---------------VQTEEELMKAIETAMGDQKDCLCFIEAIVHRDDTSK
        +M PQD+STMLRL Q+NIIFLINNGGYTIEVE+HDGPYNVIKNWDYTAL               V+TEEEL+KAI+ AMG++ DCLCFIE IVHRDDTSK
Subjt:  EMGPQDVSTMLRLKQKNIIFLINNGGYTIEVELHDGPYNVIKNWDYTAL---------------VQTEEELMKAIETAMGDQKDCLCFIEAIVHRDDTSK

Query:  ELLEFGNKLVAMGNRPPK
        ELLEFGNKL A+ +RPPK
Subjt:  ELLEFGNKLVAMGNRPPK

A0A6J1EUY4 Pyruvate decarboxylase1.1e-4072.03Show/hide
Query:  EMGPQDVSTMLRLKQKNIIFLINNGGYTIEVELHDGPYNVIKNWDYTALVQ---------------TEEELMKAIETAMGDQKDCLCFIEAIVHRDDTSK
        +M PQ+VSTM++L QKNIIFLINNGGYTIEVELHDGPYNVIKNWDYTA+V                TEEEL+ A+ETAMGD+ DCLCFIE IVHRDDTSK
Subjt:  EMGPQDVSTMLRLKQKNIIFLINNGGYTIEVELHDGPYNVIKNWDYTALVQ---------------TEEELMKAIETAMGDQKDCLCFIEAIVHRDDTSK

Query:  ELLEFGNKLVAMGNRPPK
        ELLEFGNKLVA   RPP+
Subjt:  ELLEFGNKLVAMGNRPPK

A0A6J1GDK7 Pyruvate decarboxylase7.0e-4071.19Show/hide
Query:  EMGPQDVSTMLRLKQKNIIFLINNGGYTIEVELHDGPYNVIKNWDYTAL---------------VQTEEELMKAIETAMGDQKDCLCFIEAIVHRDDTSK
        +M PQD+STMLRL Q+NIIFLINNGGYTIEVE+HDGPYNVIKNW+YTAL               V+TEEEL+KAIE A GD+ +CLCFIEAIVHRDDTSK
Subjt:  EMGPQDVSTMLRLKQKNIIFLINNGGYTIEVELHDGPYNVIKNWDYTAL---------------VQTEEELMKAIETAMGDQKDCLCFIEAIVHRDDTSK

Query:  ELLEFGNKLVAMGNRPPK
        ELL+FGNKL A  +RPPK
Subjt:  ELLEFGNKLVAMGNRPPK

A0A6J1IP68 Pyruvate decarboxylase5.4e-4071.19Show/hide
Query:  EMGPQDVSTMLRLKQKNIIFLINNGGYTIEVELHDGPYNVIKNWDYTAL---------------VQTEEELMKAIETAMGDQKDCLCFIEAIVHRDDTSK
        +M PQD+STMLRL Q+NIIFLINNGGYTIEVE+HDGPYNVIKNWDYT L               V+TEEEL+KAIE A GD+ +CLCFIEAIVHRDDTSK
Subjt:  EMGPQDVSTMLRLKQKNIIFLINNGGYTIEVELHDGPYNVIKNWDYTAL---------------VQTEEELMKAIETAMGDQKDCLCFIEAIVHRDDTSK

Query:  ELLEFGNKLVAMGNRPPK
        ELL+FGNKL A  +RPPK
Subjt:  ELLEFGNKLVAMGNRPPK

SwissProt top hitse value%identityAlignment
A2Y5L9 Pyruvate decarboxylase 13.1e-3765.81Show/hide
Query:  EMGPQDVSTMLRLKQKNIIFLINNGGYTIEVELHDGPYNVIKNWDYTAL---------------VQTEEELMKAIETAMGDQKDCLCFIEAIVHRDDTSK
        +M  QDVSTMLR  QK+IIFLINNGGYTIEVE+HDGPYNVIKNWDYT L               V+TEEEL++AI TA G +KDCLCFIE IVH+DDTSK
Subjt:  EMGPQDVSTMLRLKQKNIIFLINNGGYTIEVELHDGPYNVIKNWDYTAL---------------VQTEEELMKAIETAMGDQKDCLCFIEAIVHRDDTSK

Query:  ELLEFGNKLVAMGNRPP
        ELLE+G+++ A  +RPP
Subjt:  ELLEFGNKLVAMGNRPP

O82647 Pyruvate decarboxylase 13.2e-3462.83Show/hide
Query:  QDVSTMLRLKQKNIIFLINNGGYTIEVELHDGPYNVIKNWDYTALVQT---------------EEELMKAIETAMGDQKDCLCFIEAIVHRDDTSKELLE
        QD+STMLR  QK IIFLINNGGYTIEVE+HDGPYNVIKNW+YT LV                 EEEL++AI TA  ++KDCLCFIE I+H+DDTSKELLE
Subjt:  QDVSTMLRLKQKNIIFLINNGGYTIEVELHDGPYNVIKNWDYTALVQT---------------EEELMKAIETAMGDQKDCLCFIEAIVHRDDTSKELLE

Query:  FGNKLVAMGNRPP
        +G+++ A  +RPP
Subjt:  FGNKLVAMGNRPP

P28516 Pyruvate decarboxylase 11.0e-3565.49Show/hide
Query:  QDVSTMLRLKQKNIIFLINNGGYTIEVELHDGPYNVIKNWDYTAL---------------VQTEEELMKAIETAMGDQKDCLCFIEAIVHRDDTSKELLE
        QDVSTMLR  QK+IIFLINNGGYTIEVE+HDGPYNVIKNWDYT L               V+TEE+L +AI T  G +KDCLCFIE IVH+DDTSKELLE
Subjt:  QDVSTMLRLKQKNIIFLINNGGYTIEVELHDGPYNVIKNWDYTAL---------------VQTEEELMKAIETAMGDQKDCLCFIEAIVHRDDTSKELLE

Query:  FGNKLVAMGNRPP
        +G+++ A  +RPP
Subjt:  FGNKLVAMGNRPP

P51846 Pyruvate decarboxylase 29.1e-3765.49Show/hide
Query:  QDVSTMLRLKQKNIIFLINNGGYTIEVELHDGPYNVIKNWDYTAL---------------VQTEEELMKAIETAMGDQKDCLCFIEAIVHRDDTSKELLE
        QDVSTM+R +QKNIIFLINNGGYTIEVE+HDGPYNVIKNW+YT L               V+TEEEL +AI TA G++KDCLCFIE IVH+DDTSKELLE
Subjt:  QDVSTMLRLKQKNIIFLINNGGYTIEVELHDGPYNVIKNWDYTAL---------------VQTEEELMKAIETAMGDQKDCLCFIEAIVHRDDTSKELLE

Query:  FGNKLVAMGNRPP
        +G+++ +   RPP
Subjt:  FGNKLVAMGNRPP

Q0DHF6 Pyruvate decarboxylase 13.1e-3765.81Show/hide
Query:  EMGPQDVSTMLRLKQKNIIFLINNGGYTIEVELHDGPYNVIKNWDYTAL---------------VQTEEELMKAIETAMGDQKDCLCFIEAIVHRDDTSK
        +M  QDVSTMLR  QK+IIFLINNGGYTIEVE+HDGPYNVIKNWDYT L               V+TEEEL++AI TA G +KDCLCFIE IVH+DDTSK
Subjt:  EMGPQDVSTMLRLKQKNIIFLINNGGYTIEVELHDGPYNVIKNWDYTAL---------------VQTEEELMKAIETAMGDQKDCLCFIEAIVHRDDTSK

Query:  ELLEFGNKLVAMGNRPP
        ELLE+G+++ A  +RPP
Subjt:  ELLEFGNKLVAMGNRPP

Arabidopsis top hitse value%identityAlignment
AT4G33070.1 Thiamine pyrophosphate dependent pyruvate decarboxylase family protein2.3e-3562.83Show/hide
Query:  QDVSTMLRLKQKNIIFLINNGGYTIEVELHDGPYNVIKNWDYTALVQT---------------EEELMKAIETAMGDQKDCLCFIEAIVHRDDTSKELLE
        QD+STMLR  QK IIFLINNGGYTIEVE+HDGPYNVIKNW+YT LV                 EEEL++AI TA  ++KDCLCFIE I+H+DDTSKELLE
Subjt:  QDVSTMLRLKQKNIIFLINNGGYTIEVELHDGPYNVIKNWDYTALVQT---------------EEELMKAIETAMGDQKDCLCFIEAIVHRDDTSKELLE

Query:  FGNKLVAMGNRPP
        +G+++ A  +RPP
Subjt:  FGNKLVAMGNRPP

AT5G01320.1 Thiamine pyrophosphate dependent pyruvate decarboxylase family protein3.3e-3461.95Show/hide
Query:  QDVSTMLRLKQKNIIFLINNGGYTIEVELHDGPYNVIKNWDYTALVQT---------------EEELMKAIETAMGDQKDCLCFIEAIVHRDDTSKELLE
        QD+STM+R  QK IIFLINNGGYTIEVE+HDGPYNVIKNW+YT LV                 EEEL++AI+TA  ++KD LCFIE IVH+DDTSKELLE
Subjt:  QDVSTMLRLKQKNIIFLINNGGYTIEVELHDGPYNVIKNWDYTALVQT---------------EEELMKAIETAMGDQKDCLCFIEAIVHRDDTSKELLE

Query:  FGNKLVAMGNRPP
        +G+++ A   RPP
Subjt:  FGNKLVAMGNRPP

AT5G01330.1 pyruvate decarboxylase-33.3e-3462.83Show/hide
Query:  QDVSTMLRLKQKNIIFLINNGGYTIEVELHDGPYNVIKNWDYTALVQT---------------EEELMKAIETAMGDQKDCLCFIEAIVHRDDTSKELLE
        QDVSTM+R  QK IIFLINNGGYTIEVE+HDGPYNVIKNW+YT LV                 EEEL++AI TA  ++KD LCFIE IVH+DDTSKELLE
Subjt:  QDVSTMLRLKQKNIIFLINNGGYTIEVELHDGPYNVIKNWDYTALVQT---------------EEELMKAIETAMGDQKDCLCFIEAIVHRDDTSKELLE

Query:  FGNKLVAMGNRPP
        +G+++ A   RPP
Subjt:  FGNKLVAMGNRPP

AT5G54960.1 pyruvate decarboxylase-26.7e-3561.95Show/hide
Query:  QDVSTMLRLKQKNIIFLINNGGYTIEVELHDGPYNVIKNWDYTALVQT---------------EEELMKAIETAMGDQKDCLCFIEAIVHRDDTSKELLE
        QDVSTM+R  QK IIFLINNGGYTIEVE+HDGPYNVIKNW+YTA V+                EEEL+KAI TA  ++K+  CFIE IVH+DDTSKELLE
Subjt:  QDVSTMLRLKQKNIIFLINNGGYTIEVELHDGPYNVIKNWDYTALVQT---------------EEELMKAIETAMGDQKDCLCFIEAIVHRDDTSKELLE

Query:  FGNKLVAMGNRPP
        +G+++ A  +RPP
Subjt:  FGNKLVAMGNRPP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAATGGGTCCCCAAGATGTGTCAACAATGTTAAGATTGAAGCAAAAGAATATAATATTTTTGATAAATAATGGTGGATATACAATTGAAGTAGAGCTTCATGATGG
CCCTTATAATGTCATAAAAAATTGGGACTATACAGCTCTAGTTCAAACCGAGGAAGAGTTGATGAAGGCAATTGAGACCGCCATGGGAGATCAAAAAGATTGTTTGTGCT
TCATAGAAGCTATCGTTCATAGAGATGATACAAGCAAAGAATTGCTTGAATTTGGAAATAAGCTTGTTGCCATGGGTAATCGTCCTCCCAAATCAGCTTTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAATGGGTCCCCAAGATGTGTCAACAATGTTAAGATTGAAGCAAAAGAATATAATATTTTTGATAAATAATGGTGGATATACAATTGAAGTAGAGCTTCATGATGG
CCCTTATAATGTCATAAAAAATTGGGACTATACAGCTCTAGTTCAAACCGAGGAAGAGTTGATGAAGGCAATTGAGACCGCCATGGGAGATCAAAAAGATTGTTTGTGCT
TCATAGAAGCTATCGTTCATAGAGATGATACAAGCAAAGAATTGCTTGAATTTGGAAATAAGCTTGTTGCCATGGGTAATCGTCCTCCCAAATCAGCTTTATGATTATTA
TTTTTTTTTTCATTTTTGAACTTTTAGATTTCAACTATAAATAACACCATCTTCAAGTGTCATGAATTATATAATTTATTGTTTCTTCAATCAAAGTGAGAATAGCTCAA
TTAAACATAAATTAAAGTATGTATGAATGTATCATCGACTAAAAGGGTTGAGGTTCGAATTTTTCACCAATATGTTAAACTAAAAAATAATAATAATTTAGACTCCATTT
GGTAAACATTTGGTTTTTTATTTTTGAAAATTAAGTCTATATAAATACTTCACTCA
Protein sequenceShow/hide protein sequence
MEMGPQDVSTMLRLKQKNIIFLINNGGYTIEVELHDGPYNVIKNWDYTALVQTEEELMKAIETAMGDQKDCLCFIEAIVHRDDTSKELLEFGNKLVAMGNRPPKSAL