; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi01G015700 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G015700
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionkinetochore protein SPC24 homolog
Genome locationchr01:13923530..13927487
RNA-Seq ExpressionLsi01G015700
SyntenyLsi01G015700
Gene Ontology termsGO:0051983 - regulation of chromosome segregation (biological process)
InterPro domainsIPR044951 - Kinetochore protein SPC24-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603567.1 Kinetochore protein SPC24-like protein, partial [Cucurbita argyrosperma subsp. sororia]8.8e-3983.33Show/hide
Query:  MYDFFVNKLVSNEINELESQRISVQERKQAMKKLEKQELWAQRKLSMYASVTDIIPNMDDQPKISGHIVDRNKRVVQEFEFDPAKISSFDICNGIWNMIN
        M+  FVN ++++EIN+L+ QRISVQERKQAMKKLE+QEL  QRKLSMYASVTDIIPNMDDQ KISGHIVDRNKRVVQEFEFDP  ISSFDICNGIWNMIN
Subjt:  MYDFFVNKLVSNEINELESQRISVQERKQAMKKLEKQELWAQRKLSMYASVTDIIPNMDDQPKISGHIVDRNKRVVQEFEFDPAKISSFDICNGIWNMIN

Query:  SP
        SP
Subjt:  SP
XP_004148609.1 kinetochore protein SPC24 homolog [Cucumis sativus]1.0e-3988.42Show/hide
Query:  KLVSNEINELESQRISVQERKQAMKKLEKQELWAQRKLSMYASVTDIIPNMDDQPKISGHIVDRNKRVVQEFEFDPAKISSFDICNGIWNMINSP
        +LV+NEINELE +R+SVQERKQAMKKLE+QELWAQRKLSMYASVTDIIPNM+DQ KISGHIVDRNKRVVQ+FEFDPAKISSFD CNG+WNMINSP
Subjt:  KLVSNEINELESQRISVQERKQAMKKLEKQELWAQRKLSMYASVTDIIPNMDDQPKISGHIVDRNKRVVQEFEFDPAKISSFDICNGIWNMINSP
XP_008464222.1 PREDICTED: uncharacterized protein LOC103502153 [Cucumis melo]3.6e-4089.47Show/hide
Query:  KLVSNEINELESQRISVQERKQAMKKLEKQELWAQRKLSMYASVTDIIPNMDDQPKISGHIVDRNKRVVQEFEFDPAKISSFDICNGIWNMINSP
        +LV+NEINELE QR+SVQERKQAMKKLE+QELWAQRKLSMYASVTDIIPNMDDQ KISGHIVDRNKRVVQ+FEFDP KISSFD CNG+WNMINSP
Subjt:  KLVSNEINELESQRISVQERKQAMKKLEKQELWAQRKLSMYASVTDIIPNMDDQPKISGHIVDRNKRVVQEFEFDPAKISSFDICNGIWNMINSP
XP_022950424.1 uncharacterized protein LOC111453528 [Cucurbita moschata]2.8e-3785.26Show/hide
Query:  KLVSNEINELESQRISVQERKQAMKKLEKQELWAQRKLSMYASVTDIIPNMDDQPKISGHIVDRNKRVVQEFEFDPAKISSFDICNGIWNMINSP
        +++++EIN+L+ QRISVQERKQAMKKLE+QEL  QRKLSMYASVTDIIPNMDDQ KISGHIVDRNKRVVQEFEFDP  ISSFDICNGIWNMINSP
Subjt:  KLVSNEINELESQRISVQERKQAMKKLEKQELWAQRKLSMYASVTDIIPNMDDQPKISGHIVDRNKRVVQEFEFDPAKISSFDICNGIWNMINSP
XP_038883770.1 kinetochore protein SPC24 homolog [Benincasa hispida]8.0e-4089.47Show/hide
Query:  KLVSNEINELESQRISVQERKQAMKKLEKQELWAQRKLSMYASVTDIIPNMDDQPKISGHIVDRNKRVVQEFEFDPAKISSFDICNGIWNMINSP
        +LV+NEINELE QRIS+QERKQAMKKLE+QELWAQRKLSMYASVTDIIPNMDDQ KISGHIVDR+KR+VQEFEFD  KISSFDICNGIWNMINSP
Subjt:  KLVSNEINELESQRISVQERKQAMKKLEKQELWAQRKLSMYASVTDIIPNMDDQPKISGHIVDRNKRVVQEFEFDPAKISSFDICNGIWNMINSP
TrEMBL top hitse value%identityAlignment
A0A0A0KXM7 Uncharacterized protein7.8e-4187.76Show/hide
Query:  FVNKLVSNEINELESQRISVQERKQAMKKLEKQELWAQRKLSMYASVTDIIPNMDDQPKISGHIVDRNKRVVQEFEFDPAKISSFDICNGIWNMINSP
        F N LV+NEINELE +R+SVQERKQAMKKLE+QELWAQRKLSMYASVTDIIPNM+DQ KISGHIVDRNKRVVQ+FEFDPAKISSFD CNG+WNMINSP
Subjt:  FVNKLVSNEINELESQRISVQERKQAMKKLEKQELWAQRKLSMYASVTDIIPNMDDQPKISGHIVDRNKRVVQEFEFDPAKISSFDICNGIWNMINSP
A0A1S3CKZ4 uncharacterized protein LOC1035021531.7e-4089.47Show/hide
Query:  KLVSNEINELESQRISVQERKQAMKKLEKQELWAQRKLSMYASVTDIIPNMDDQPKISGHIVDRNKRVVQEFEFDPAKISSFDICNGIWNMINSP
        +LV+NEINELE QR+SVQERKQAMKKLE+QELWAQRKLSMYASVTDIIPNMDDQ KISGHIVDRNKRVVQ+FEFDP KISSFD CNG+WNMINSP
Subjt:  KLVSNEINELESQRISVQERKQAMKKLEKQELWAQRKLSMYASVTDIIPNMDDQPKISGHIVDRNKRVVQEFEFDPAKISSFDICNGIWNMINSP
A0A6J1F034 uncharacterized protein LOC1114381845.8e-3684.21Show/hide
Query:  KLVSNEINELESQRISVQERKQAMKKLEKQELWAQRKLSMYASVTDIIPNMDDQPKISGHIVDRNKRVVQEFEFDPAKISSFDICNGIWNMINSP
        +LVSN+INEL+ QRISVQE+KQA KKLE+QEL AQRKLSMYASVTDIIPNMDD  KISGHIVDRNKRVVQ+FE DP K+SSFDICN IWNMINSP
Subjt:  KLVSNEINELESQRISVQERKQAMKKLEKQELWAQRKLSMYASVTDIIPNMDDQPKISGHIVDRNKRVVQEFEFDPAKISSFDICNGIWNMINSP
A0A6J1GFS1 uncharacterized protein LOC1114535281.4e-3785.26Show/hide
Query:  KLVSNEINELESQRISVQERKQAMKKLEKQELWAQRKLSMYASVTDIIPNMDDQPKISGHIVDRNKRVVQEFEFDPAKISSFDICNGIWNMINSP
        +++++EIN+L+ QRISVQERKQAMKKLE+QEL  QRKLSMYASVTDIIPNMDDQ KISGHIVDRNKRVVQEFEFDP  ISSFDICNGIWNMINSP
Subjt:  KLVSNEINELESQRISVQERKQAMKKLEKQELWAQRKLSMYASVTDIIPNMDDQPKISGHIVDRNKRVVQEFEFDPAKISSFDICNGIWNMINSP
A0A6J1IPN8 uncharacterized protein LOC1114783201.4e-3785.26Show/hide
Query:  KLVSNEINELESQRISVQERKQAMKKLEKQELWAQRKLSMYASVTDIIPNMDDQPKISGHIVDRNKRVVQEFEFDPAKISSFDICNGIWNMINSP
        +++++EIN+L+ QRISVQERKQAMKKLE+QEL  QRKLSMYASVTDIIPNMDDQ KISGHIVDRNKRVVQEFEFDP  ISSFDICNGIWNMINSP
Subjt:  KLVSNEINELESQRISVQERKQAMKKLEKQELWAQRKLSMYASVTDIIPNMDDQPKISGHIVDRNKRVVQEFEFDPAKISSFDICNGIWNMINSP
SwissProt top hitse value%identityAlignment
Q67XT3 Kinetochore protein SPC24 homolog1.9e-2046.24Show/hide
Query:  KLVSNEINELESQRISVQERKQAMKKLEKQELWAQRKLSMYASVTDIIPNMDDQPKISGHIVDRNKRVVQEFEFDPAKISSFDICNGIWNMIN
        +LV++E+ +L +Q  S+ E KQ+ K+  + +L A++KLSMYASVT++IP++DD  KISG++VDR KR++++F+F+  K+++++ CN IW++IN
Subjt:  KLVSNEINELESQRISVQERKQAMKKLEKQELWAQRKLSMYASVTDIIPNMDDQPKISGHIVDRNKRVVQEFEFDPAKISSFDICNGIWNMIN
Arabidopsis top hitse value%identityAlignment
AT3G08880.1 unknown protein1.4e-2146.24Show/hide
Query:  KLVSNEINELESQRISVQERKQAMKKLEKQELWAQRKLSMYASVTDIIPNMDDQPKISGHIVDRNKRVVQEFEFDPAKISSFDICNGIWNMIN
        +LV++E+ +L +Q  S+ E KQ+ K+  + +L A++KLSMYASVT++IP++DD  KISG++VDR KR++++F+F+  K+++++ CN IW++IN
Subjt:  KLVSNEINELESQRISVQERKQAMKKLEKQELWAQRKLSMYASVTDIIPNMDDQPKISGHIVDRNKRVVQEFEFDPAKISSFDICNGIWNMIN
AT5G01570.1 unknown protein6.3e-1145.71Show/hide
Query:  QERKQAMKKLEKQELWAQRKLSMYASVTDIIPNMDDQPKISGHIVDRNKRVVQEFEFDPAKISS-FDICN
        +E + A+K+ ++ +L  + KL MYASVT +IPN+DD  K SG++V R+KR++ +FEFD  K +S ++ CN
Subjt:  QERKQAMKKLEKQELWAQRKLSMYASVTDIIPNMDDQPKISGHIVDRNKRVVQEFEFDPAKISS-FDICN

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAATAAAATTAAGGCATGCCGGCAGAAAACAGAAGAGGCGAAAGCGAACACTGTTGCAGATGATGAAATGGAGATTCTCGAAAAGGAACTCGAAGAGGAGGTTGGG
AAAGGGCATTTGCTCATGGAGGAGATTAGATAAGTGTAAAATTAAGTTTAATTATGAAATTCTTCATATGATTTGGTTGTTTGTTCCTAATGTATTTATGTATGATTTTT
TCGTCAACAAACTGGTCAGCAATGAGATTAATGAACTAGAAAGCCAAAGGATTTCTGTTCAAGAAAGGAAGCAGGCGATGAAGAAACTTGAGAAACAAGAACTTTGGGCT
CAGAGGAAGCTTTCAATGTATGCTTCAGTCACTGATATAATACCAAATATGGACGATCAGCCTAAAATTTCTGGCCATATTGTGGACAGAAATAAACGGGTTGTGCAAGA
GTTTGAATTTGACCCGGCTAAGATCTCTTCTTTTGATATATGCAATGGCATTTGGAATATGATTAATTCCCCATAG
mRNA sequenceShow/hide mRNA sequence
TACAAGAGAAAAAAAAACTCGCTATCAAATAGACTTTCAAATATCAAATGAAAAAAATGTTAACAAAGAAAACCAAAAAAATCGTCGATTTGAACCTACGCAGGCAAATC
CCAACAGATTTCGAGTCTGTCTCCTTAACCACTCGGACATATCGACAATTTTGTATATTTTTCCAACCAACATTTAACTCTTTGCAGAAAAGCATTGATTTTGGCGCCTA
AACAAAATTGATTTTTTTCTTTATGGAGCCCTAAGAATGAAGATCGCCCCGAAACAAAACAAGCTCCCCACTGGCTACTGAATTCAAATTTCAATTGCCCTGAAATTTCC
CTTCTTCACAGCAAGCTCCTTGTTGATTTCTTCTTCAATACAGAGAAATGGGAGATTTTGCCTCAAAGTCCGACATCGAGGAGTTCATATCTTTTGCCGACGATTTGGTA
GAACTCTTAAAGGACCCACTTGACGTTCAAACCTTGAATCAATGTCTCGAACATTTCAAGGCCCTTCAATCTTCTTGTGACGATGATTTCAGTAGTGTTCAAAGTTTAGT
TCAAGATTATGAGAATAAAATTAAGGCATGCCGGCAGAAAACAGAAGAGGCGAAAGCGAACACTGTTGCAGATGATGAAATGGAGATTCTCGAAAAGGAACTCGAAGAGG
AGGTTGGGAAAGGGCATTTGCTCATGGAGGAGATTAGATAAGTGTAAAATTAAGTTTAATTATGAAATTCTTCATATGATTTGGTTGTTTGTTCCTAATGTATTTATGTA
TGATTTTTTCGTCAACAAACTGGTCAGCAATGAGATTAATGAACTAGAAAGCCAAAGGATTTCTGTTCAAGAAAGGAAGCAGGCGATGAAGAAACTTGAGAAACAAGAAC
TTTGGGCTCAGAGGAAGCTTTCAATGTATGCTTCAGTCACTGATATAATACCAAATATGGACGATCAGCCTAAAATTTCTGGCCATATTGTGGACAGAAATAAACGGGTT
GTGCAAGAGTTTGAATTTGACCCGGCTAAGATCTCTTCTTTTGATATATGCAATGGCATTTGGAATATGATTAATTCCCCATAGTACCAGACATCAATTACATCGTGAAT
TAGAAGCTTACTATAGCTTGGTCCTTCTTTCTTCACTTCATGAATGTAATTTGGACAGAGAAACAACCAAGAAACTCATCAGCCACCCGAAAGCAAGAAGGACAAGATCT
AGCCATCATTTTCCATTCATGATATCAGATTCAATCTCCATAAGCTTCATTAGATAGAGTTCAGAATATCAGGTATTGGCGGTCGTCCAGCATTATAGACTTGCAAGCTT
CTGGTGCAGCACTGCCTTTGTAAGCTTTGCAAATGTAGGCCATGAAGTTTTGGTAGTCCTGATTCAGACAAAAGAAAACAGCTTCATTTCAAAGAATCGCTAGGCAAAGA
ACAAGGATAAAACTAGCTCAAATCAAAGCTGACCAACCTCTTGGAGAGGGTGATTATCAACAATGATCCATGGGACGAACCGGTGAGGCGGGTTGAGTTGAGTAGTTTCA
GAAGCATAGTTTTGTTCAAGCTGCATTTCATTGGCTTTACTCAGGGTTCAACCAAAAAAGAAACAGAGAAAAGATGTTAAGAAAGCAAAGGTACCACTTTCCCATGCCCA
TTTCTGTAGCAATCTATTGGTATGGCACTCAACTTGGCAATGTCAAAACACTTTGTCCATTCATTGTGTCTGTTTTGCACTGTCAATCCCTCAACACAATGGATGAATCT
GAAATGTTTTTCC
Protein sequenceShow/hide protein sequence
MRIKLRHAGRKQKRRKRTLLQMMKWRFSKRNSKRRLGKGICSWRRLDKCKIKFNYEILHMIWLFVPNVFMYDFFVNKLVSNEINELESQRISVQERKQAMKKLEKQELWA
QRKLSMYASVTDIIPNMDDQPKISGHIVDRNKRVVQEFEFDPAKISSFDICNGIWNMINSP