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Lsi01G015970 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G015970
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr01:14214241..14214465
RNA-Seq ExpressionLsi01G015970
SyntenyLsi01G015970
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595568.1 hypothetical protein SDJN03_12121, partial [Cucurbita argyrosperma subsp. sororia]7.7e-0870.18Show/hide
Query:  MSSWRFGNTIPILMHVALRKTFLLFRGVSLLITDLIAVASSAIRFSRWHFTPTLQVS
        MSS RFGNTIPILM VALRK  L+FR VSL I DLIA+A+SAIRFSR   +P + VS
Subjt:  MSSWRFGNTIPILMHVALRKTFLLFRGVSLLITDLIAVASSAIRFSRWHFTPTLQVS
KAG6603548.1 hypothetical protein SDJN03_04157, partial [Cucurbita argyrosperma subsp. sororia]1.3e-1571.62Show/hide
Query:  MSSWRFGNTIPILMHVALRKTFLLFRGVSLLITDLIAVASSAIRFSRWHFTPTLQVSSDHRYSPMSLMIIRQNR
        MSS RFG++I ILM VALRKT L+FR VS+LITDLIAVA+SAIRFSRW   PT+Q+S   RYS MSLMIIR +R
Subjt:  MSSWRFGNTIPILMHVALRKTFLLFRGVSLLITDLIAVASSAIRFSRWHFTPTLQVSSDHRYSPMSLMIIRQNR
KGN54430.1 hypothetical protein Csa_012790 [Cucumis sativus]9.1e-1769.62Show/hide
Query:  MSSWRFGNTIPIL-MHVALRKTFLLFRGVSLLITDLIAVASSAIRFSRWHFTPTLQVSS----DHRYSPMSLMIIRQNR
        M  WRFGNTIPIL M V LRKTFLLFR  S  ITDLIA+ASSAIRF RWHF  +LQV S    D+RYSP+SLMI+R +R
Subjt:  MSSWRFGNTIPIL-MHVALRKTFLLFRGVSLLITDLIAVASSAIRFSRWHFTPTLQVSS----DHRYSPMSLMIIRQNR
TrEMBL top hitse value%identityAlignment
A0A0A0KXR7 Uncharacterized protein4.4e-1769.62Show/hide
Query:  MSSWRFGNTIPIL-MHVALRKTFLLFRGVSLLITDLIAVASSAIRFSRWHFTPTLQVSS----DHRYSPMSLMIIRQNR
        M  WRFGNTIPIL M V LRKTFLLFR  S  ITDLIA+ASSAIRF RWHF  +LQV S    D+RYSP+SLMI+R +R
Subjt:  MSSWRFGNTIPIL-MHVALRKTFLLFRGVSLLITDLIAVASSAIRFSRWHFTPTLQVSS----DHRYSPMSLMIIRQNR
A0A7N2M690 Uncharacterized protein4.3e-0443.28Show/hide
Query:  NTIPILMHVALRKTFLLFRGVSLLITDLIAVASSAIRFSRWHFTPTLQVSSDHRYSPMSLMIIRQNR
        + I +L++V LRK+  +++  ++L+ D + V  S IRFSR+ F PT  VS+  RYSPMS M+ R +R
Subjt:  NTIPILMHVALRKTFLLFRGVSLLITDLIAVASSAIRFSRWHFTPTLQVSSDHRYSPMSLMIIRQNR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGTCTTGGAGATTTGGGAATACGATCCCAATATTGATGCATGTAGCTCTCAGAAAAACTTTCCTTCTCTTCCGCGGCGTTTCTCTTTTGATCACCGATCTCATCGC
CGTCGCCTCCTCCGCCATCAGATTTTCCCGCTGGCATTTCACTCCAACTCTCCAAGTTTCTTCCGATCATAGGTACTCTCCAATGTCTCTCATGATTATTCGCCAAAATC
GTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGTCTTGGAGATTTGGGAATACGATCCCAATATTGATGCATGTAGCTCTCAGAAAAACTTTCCTTCTCTTCCGCGGCGTTTCTCTTTTGATCACCGATCTCATCGC
CGTCGCCTCCTCCGCCATCAGATTTTCCCGCTGGCATTTCACTCCAACTCTCCAAGTTTCTTCCGATCATAGGTACTCTCCAATGTCTCTCATGATTATTCGCCAAAATC
GTTGA
Protein sequenceShow/hide protein sequence
MSSWRFGNTIPILMHVALRKTFLLFRGVSLLITDLIAVASSAIRFSRWHFTPTLQVSSDHRYSPMSLMIIRQNR