CuGenDBv2

Gene ID	Lsi01G016000
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	ACT domain-containing protein
Genome location	chr01:14278115..14279549
RNA-Seq Expression	Lsi01G016000
Synteny	Lsi01G016000
Gene Ontology terms	GO:0006355 - regulation of transcription, DNA-templated (biological process) GO:0006979 - response to oxidative stress (biological process) GO:0042744 - hydrogen peroxide catabolic process (biological process) GO:0098869 - cellular oxidant detoxification (biological process) GO:0005634 - nucleus (cellular component) GO:0003700 - DNA-binding transcription factor activity (molecular function) GO:0004601 - peroxidase activity (molecular function) GO:0020037 - heme binding (molecular function) GO:0043565 - sequence-specific DNA binding (molecular function) GO:0046872 - metal ion binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004149926.1 uncharacterized protein LOC101209807 [Cucumis sativus]

5.0e-30

84.44

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Query:  MGSRERKKAA----TSSHHKSKEFRASTSSSAVVNVESLERGFLINVFLERNSPGLLVQILEAFEKLGLEVLNADVSCSDCFQLQAVGEK
        MGSRERKKAA     SSHH SKEFRASTSS+AVVNVES+ERGFLINVFLERNSPGLLV+ILEAFEKLGL VL+AD+SCSDCFQLQA GE+
Subjt:  MGSRERKKAA----TSSHHKSKEFRASTSSSAVVNVESLERGFLINVFLERNSPGLLVQILEAFEKLGLEVLNADVSCSDCFQLQAVGEK

XP_008464258.1 PREDICTED: uncharacterized protein LOC103502184 [Cucumis melo]

4.5e-31

87.64

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Query:  MGSRERKK---AATSSHHKSKEFRASTSSSAVVNVESLERGFLINVFLERNSPGLLVQILEAFEKLGLEVLNADVSCSDCFQLQAVGEK
        MGSRERKK   AA SSHH SKEFRASTSSSAVVNVES+ERGFLINVFLERNSPGLLV+ILEAFEKLGL VL+AD+SCSDCFQLQAVGE+
Subjt:  MGSRERKK---AATSSHHKSKEFRASTSSSAVVNVESLERGFLINVFLERNSPGLLVQILEAFEKLGLEVLNADVSCSDCFQLQAVGEK

XP_022950375.1 uncharacterized protein LOC111453491 [Cucurbita moschata]

1.8e-32

92.05

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Query:  MGSRERKKAATSS--HHKSKEFRASTSSSAVVNVESLERGFLINVFLERNSPGLLVQILEAFEKLGLEVLNADVSCSDCFQLQAVGEK
        MGSRERKKAA SS  HHKSKEFRASTSSSAVVNVE+LERGFLINVF ERNSPGLLVQILEAFEKLGLEVL+ADVSCSDCFQLQAVGE+
Subjt:  MGSRERKKAATSS--HHKSKEFRASTSSSAVVNVESLERGFLINVFLERNSPGLLVQILEAFEKLGLEVLNADVSCSDCFQLQAVGEK

XP_022977370.1 uncharacterized protein LOC111477723 [Cucurbita maxima]

6.9e-32

90.91

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Query:  MGSRERKKAATSS--HHKSKEFRASTSSSAVVNVESLERGFLINVFLERNSPGLLVQILEAFEKLGLEVLNADVSCSDCFQLQAVGEK
        MGSRERKKAA SS  HHKSKEFRASTSSSAVVNVE LERGFLINVF ERNSPGLLV+ILEAFEKLGLEVL+ADVSCSDCFQLQAVGE+
Subjt:  MGSRERKKAATSS--HHKSKEFRASTSSSAVVNVESLERGFLINVFLERNSPGLLVQILEAFEKLGLEVLNADVSCSDCFQLQAVGEK

XP_038882922.1 uncharacterized protein LOC120074022 [Benincasa hispida]

1.3e-33

93.02

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Query:  MGSRERKKAATSSHHKSKEFRASTSSSAVVNVESLERGFLINVFLERNSPGLLVQILEAFEKLGLEVLNADVSCSDCFQLQAVGEK
        MGSRERKKAA SSHHKSKEFRASTSSSA+VNVESLERGFLINVFLERNSPGLLV+ILEAFEKLGLEVL+A+VSCSDCFQLQAVGE+
Subjt:  MGSRERKKAATSSHHKSKEFRASTSSSAVVNVESLERGFLINVFLERNSPGLLVQILEAFEKLGLEVLNADVSCSDCFQLQAVGEK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L039 Uncharacterized protein

2.4e-30

84.44

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Query:  MGSRERKKAA----TSSHHKSKEFRASTSSSAVVNVESLERGFLINVFLERNSPGLLVQILEAFEKLGLEVLNADVSCSDCFQLQAVGEK
        MGSRERKKAA     SSHH SKEFRASTSS+AVVNVES+ERGFLINVFLERNSPGLLV+ILEAFEKLGL VL+AD+SCSDCFQLQA GE+
Subjt:  MGSRERKKAA----TSSHHKSKEFRASTSSSAVVNVESLERGFLINVFLERNSPGLLVQILEAFEKLGLEVLNADVSCSDCFQLQAVGEK

A0A1S3CLI8 uncharacterized protein LOC103502184

2.2e-31

87.64

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Query:  MGSRERKK---AATSSHHKSKEFRASTSSSAVVNVESLERGFLINVFLERNSPGLLVQILEAFEKLGLEVLNADVSCSDCFQLQAVGEK
        MGSRERKK   AA SSHH SKEFRASTSSSAVVNVES+ERGFLINVFLERNSPGLLV+ILEAFEKLGL VL+AD+SCSDCFQLQAVGE+
Subjt:  MGSRERKK---AATSSHHKSKEFRASTSSSAVVNVESLERGFLINVFLERNSPGLLVQILEAFEKLGLEVLNADVSCSDCFQLQAVGEK

A0A6J1CQF9 uncharacterized protein LOC111013797

1.7e-28

85.06

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Query:  MGSRERKKAATSS-HHKSKEFRASTSSSAVVNVESLERGFLINVFLERNSPGLLVQILEAFEKLGLEVLNADVSCSDCFQLQAVGEK
        MGSRERKKAA SS +HKSKEFRASTSSSA VNVES+ERGF+INV+LERNSPGLLV+ILE FEKLGLEVL+A VSCSD FQLQAVGE+
Subjt:  MGSRERKKAATSS-HHKSKEFRASTSSSAVVNVESLERGFLINVFLERNSPGLLVQILEAFEKLGLEVLNADVSCSDCFQLQAVGEK

A0A6J1GFJ5 uncharacterized protein LOC111453491

8.8e-33

92.05

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Query:  MGSRERKKAATSS--HHKSKEFRASTSSSAVVNVESLERGFLINVFLERNSPGLLVQILEAFEKLGLEVLNADVSCSDCFQLQAVGEK
        MGSRERKKAA SS  HHKSKEFRASTSSSAVVNVE+LERGFLINVF ERNSPGLLVQILEAFEKLGLEVL+ADVSCSDCFQLQAVGE+
Subjt:  MGSRERKKAATSS--HHKSKEFRASTSSSAVVNVESLERGFLINVFLERNSPGLLVQILEAFEKLGLEVLNADVSCSDCFQLQAVGEK

A0A6J1IM47 uncharacterized protein LOC111477723

3.3e-32

90.91

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Query:  MGSRERKKAATSS--HHKSKEFRASTSSSAVVNVESLERGFLINVFLERNSPGLLVQILEAFEKLGLEVLNADVSCSDCFQLQAVGEK
        MGSRERKKAA SS  HHKSKEFRASTSSSAVVNVE LERGFLINVF ERNSPGLLV+ILEAFEKLGLEVL+ADVSCSDCFQLQAVGE+
Subjt:  MGSRERKKAATSS--HHKSKEFRASTSSSAVVNVESLERGFLINVFLERNSPGLLVQILEAFEKLGLEVLNADVSCSDCFQLQAVGEK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G40435.1 BEST Arabidopsis thaliana protein match is: transcription regulators (TAIR:AT3G56220.1)

4.5e-13

57.14

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Query:  VVNVESLERGFLINVFLERNSPGLLVQILEAFEKLGLEVLNADVSCSDCFQLQAVG
        +V VE+L++GF+INVF  +N PG+LV +LEAFE +GL VL A  SC+D F L A+G
Subjt:  VVNVESLERGFLINVFLERNSPGLLVQILEAFEKLGLEVLNADVSCSDCFQLQAVG

AT3G56220.1 transcription regulators

5.0e-12

46.25

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Query:  ERKKAATSSHHKSKEFRASTSSSAVVNVESLERGFLINVFLERNSPGLLVQILEAFEKLGLEVLNADVSCSDCFQLQAVG
        E+   AT+S    + FR S+  + +V VE+LE+GF+I V   +N  G+LV +LE FE LGL+V+ A VSC+D F L A+G
Subjt:  ERKKAATSSHHKSKEFRASTSSSAVVNVESLERGFLINVFLERNSPGLLVQILEAFEKLGLEVLNADVSCSDCFQLQAVG

Sequences

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CDS sequence

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ATGGGTTCGAGAGAGCGAAAGAAAGCAGCAACTTCTTCTCATCACAAGTCTAAAGAATTTCGTGCATCCACAAGCTCTAGTGCTGTGGTGAATGTGGAGAGTTTAGAGAG
GGGTTTCCTAATAAATGTATTTTTGGAAAGAAATTCACCTGGATTGCTGGTTCAAATTCTAGAAGCCTTTGAGAAATTAGGACTCGAAGTCCTTAATGCTGACGTGTCTT
GTTCCGATTGTTTCCAACTCCAAGCTGTCGGAGAAAAGGTCTGA

mRNA sequence

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CGAATATAAATGAAGAGTAAACTCGTGGTCTACTTTGTTTCAAGAAGCTCATCAAGAGAAAGCAAGAACCAGTGGTGGCGCGTGGGCGGCGAGTGGAGGAGACACGGCGG
CGTTTGCAATAAATTTCTCCGGTGGCCGTGAAATGGGTTCGAGAGAGCGAAAGAAAGCAGCAACTTCTTCTCATCACAAGTCTAAAGAATTTCGTGCATCCACAAGCTCT
AGTGCTGTGGTGAATGTGGAGAGTTTAGAGAGGGGTTTCCTAATAAATGTATTTTTGGAAAGAAATTCACCTGGATTGCTGGTTCAAATTCTAGAAGCCTTTGAGAAATT
AGGACTCGAAGTCCTTAATGCTGACGTGTCTTGTTCCGATTGTTTCCAACTCCAAGCTGTCGGAGAAAAGGTCTGA

Protein sequence

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MGSRERKKAATSSHHKSKEFRASTSSSAVVNVESLERGFLINVFLERNSPGLLVQILEAFEKLGLEVLNADVSCSDCFQLQAVGEKV

Lsi01G016000 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome