; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi01G016260 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G016260
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptiontRNA_int_end_N2 domain-containing protein
Genome locationchr01:14633780..14638123
RNA-Seq ExpressionLsi01G016260
SyntenyLsi01G016260
Gene Ontology termsGO:0000379 - tRNA-type intron splice site recognition and cleavage (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0000214 - tRNA-intron endonuclease complex (cellular component)
GO:0004519 - endonuclease activity (molecular function)
InterPro domainsIPR024336 - tRNA-splicing endonuclease, subunit Sen54, N-terminal
IPR024337 - tRNA-splicing endonuclease, subunit Sen54


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596967.1 Chromatin assembly factor 1 subunit FAS1, partial [Cucurbita argyrosperma subsp. sororia]3.5e-12783.77Show/hide
Query:  MEATDWESSSGGASGDEDNYEQDINDEEECLCASGYLRKLQFRKHASMARWNDQMGMAEVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLLDH
        MEATDWE SSGGAS D+DN+EQDI +EEECLC+SG +RKLQFRKHAS ARWND+MGMAEVLENKGSLWTT+GIVRCGKIYCSIEETLFLIEVGALHLLDH
Subjt:  MEATDWESSSGGASGDEDNYEQDINDEEECLCASGYLRKLQFRKHASMARWNDQMGMAEVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLLDH

Query:  DNSSLSLKDVYKKVAEGKSGCLWEQFEVYRHLKSLGFIVGKHKVPWSLKSVRNGSDISSPSSIENKGASDVEVEDARSISELLDAIQLDEVTPIFYAFLP
        DNSSLSLKDVYKKVAEGKS C+WEQFEVYRHLKSLG+IVGKHKVPWS+K  RNG DISS SSIENKG++D   ED +SI EL+DAIQL+EVTPIF  +LP
Subjt:  DNSSLSLKDVYKKVAEGKSGCLWEQFEVYRHLKSLGFIVGKHKVPWSLKSVRNGSDISSPSSIENKGASDVEVEDARSISELLDAIQLDEVTPIFYAFLP

Query:  HKKFRKSSPGDPNFMVYLTRGYLPSKEDIEVLEGTSRGIPMKYCHVEHGRVCFFSFDKVELPILP
        H KFRKSSPGDPNFMV LTRGY P K DIEV+E  S GIPMKYCHVEHGRVCFFSFDKVELP+LP
Subjt:  HKKFRKSSPGDPNFMVYLTRGYLPSKEDIEVLEGTSRGIPMKYCHVEHGRVCFFSFDKVELPILP

KAG7028441.1 tRNA-splicing endonuclease subunit Sen54 [Cucurbita argyrosperma subsp. argyrosperma]3.5e-12783.77Show/hide
Query:  MEATDWESSSGGASGDEDNYEQDINDEEECLCASGYLRKLQFRKHASMARWNDQMGMAEVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLLDH
        MEATDWE SSGGAS D+DN+EQDI +EEECLC+SG +RKLQFRKHAS ARWND+MGMAEVLENKGSLWTT+GIVRCGKIYCSIEETLFLIEVGALHLLDH
Subjt:  MEATDWESSSGGASGDEDNYEQDINDEEECLCASGYLRKLQFRKHASMARWNDQMGMAEVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLLDH

Query:  DNSSLSLKDVYKKVAEGKSGCLWEQFEVYRHLKSLGFIVGKHKVPWSLKSVRNGSDISSPSSIENKGASDVEVEDARSISELLDAIQLDEVTPIFYAFLP
        DNSSLSLKDVYKKVAEGKS C+WEQFEVYRHLKSLG+IVGKHKVPWS+K  RNG DISS SSIENKG++D   ED +SI EL+DAIQL+EVTPIF  +LP
Subjt:  DNSSLSLKDVYKKVAEGKSGCLWEQFEVYRHLKSLGFIVGKHKVPWSLKSVRNGSDISSPSSIENKGASDVEVEDARSISELLDAIQLDEVTPIFYAFLP

Query:  HKKFRKSSPGDPNFMVYLTRGYLPSKEDIEVLEGTSRGIPMKYCHVEHGRVCFFSFDKVELPILP
        H KFRKSSPGDPNFMV LTRGY P K DIEV+E  S GIPMKYCHVEHGRVCFFSFDKVELP+LP
Subjt:  HKKFRKSSPGDPNFMVYLTRGYLPSKEDIEVLEGTSRGIPMKYCHVEHGRVCFFSFDKVELPILP

XP_011653726.1 uncharacterized protein LOC101210680 isoform X2 [Cucumis sativus]8.0e-13288.76Show/hide
Query:  MEATDWESSSGGAS--GDEDNYEQDINDEEECLCASGYLRKLQFRKHASMARWNDQMGMAEVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLL
        MEAT+WESSSGGAS  GDEDNYEQDINDEEECL ASG LRKLQFRKHAS ARWNDQMGMAEVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLL
Subjt:  MEATDWESSSGGAS--GDEDNYEQDINDEEECLCASGYLRKLQFRKHASMARWNDQMGMAEVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLL

Query:  DHDNSSLSLKDVYKKVAEGKSGCLWEQFEVYRHLKSLGFIVGKHKVPWSLKSVRNGSDISSPSSIENKGASDVEVEDARSISELLDAIQLDEVTPIFYAF
        DHDNSSLSLKDVYKKVAEG+SG LWEQFEVYRHLKSLG+IVGKH+VPWSLK+VRN  DISSPSS ENKGASDV+ +D +SI  LL+AIQLDEVTPIF  F
Subjt:  DHDNSSLSLKDVYKKVAEGKSGCLWEQFEVYRHLKSLGFIVGKHKVPWSLKSVRNGSDISSPSSIENKGASDVEVEDARSISELLDAIQLDEVTPIFYAF

Query:  LPHKKFRKSSPGDPNFMVYLTRGYLPSKEDIEVLEGTSRGIPMKYCHVEHGRVCFFSFDKVELPILP
        LPH KFRKSSPGDPNFMV LTRGY PSKE+IEVLE TSRGIPMKYCHVEHGRVCFFSFDKVELP+LP
Subjt:  LPHKKFRKSSPGDPNFMVYLTRGYLPSKEDIEVLEGTSRGIPMKYCHVEHGRVCFFSFDKVELPILP

XP_022156818.1 uncharacterized protein LOC111023660 [Momordica charantia]4.9e-12985.28Show/hide
Query:  MEATDWESSSGGASGDEDNYEQDINDEEECLCASGYLRKLQFRKHASMARWNDQMGMAEVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLLDH
        MEATDWESSSGGASGD++ YEQD+ DEEECLCASG +RKLQFRKHAS ARWNDQMGMAEVLEN+GSLWTTTGIVRCGKIYCS EETLFL+EVGALHLLDH
Subjt:  MEATDWESSSGGASGDEDNYEQDINDEEECLCASGYLRKLQFRKHASMARWNDQMGMAEVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLLDH

Query:  DNSSLSLKDVYKKVAEGKSGCLWEQFEVYRHLKSLGFIVGKHKVPWSLKSVRNGSDISSPSSIENKGASDVEVEDARSISELLDAIQLDEVTPIFYAFLP
        DNSSLSLKDVYKKVAEGK+GCLWEQFEVYRHLKSLGFIVGKHKVPWS+K VRNGSDIS  SSIEN+GA D+E +D RSISELL +IQLD+V PIF  FLP
Subjt:  DNSSLSLKDVYKKVAEGKSGCLWEQFEVYRHLKSLGFIVGKHKVPWSLKSVRNGSDISSPSSIENKGASDVEVEDARSISELLDAIQLDEVTPIFYAFLP

Query:  HKKFRKSSPGDPNFMVYLTRGYLPSKEDIEVLEGTSRGIPMKYCHVEHGRVCFFSFDKVELPILP
        H KFRKSSPGDPNFMV LTRGY P K+DIE LE TSRGI +KYCHVEHGRVCFFSFDK+ELP+LP
Subjt:  HKKFRKSSPGDPNFMVYLTRGYLPSKEDIEVLEGTSRGIPMKYCHVEHGRVCFFSFDKVELPILP

XP_038883355.1 uncharacterized protein LOC120074337 [Benincasa hispida]2.2e-13790.57Show/hide
Query:  MEATDWESSSGGASGDEDNYEQDINDEEECLCASGYLRKLQFRKHASMARWNDQMGMAEVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLLDH
        MEA DWESSSGGASGDEDNYE+DIN+EEECLCASGYLRKLQFRKHAS ARWND+MGMAEVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLLDH
Subjt:  MEATDWESSSGGASGDEDNYEQDINDEEECLCASGYLRKLQFRKHASMARWNDQMGMAEVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLLDH

Query:  DNSSLSLKDVYKKVAEGKSGCLWEQFEVYRHLKSLGFIVGKHKVPWSLKSVRNGSDISSPSSIENKGASDVEVEDARSISELLDAIQLDEVTPIFYAFLP
        DNSSLSL+DVYKK+AEGK+GCLWEQFEVYRHLKSLGFIVGKHKVPWSLKSVR+GS+ISSPSSIENKGASDV+ ED RSISELLD IQL+EV PIF  FLP
Subjt:  DNSSLSLKDVYKKVAEGKSGCLWEQFEVYRHLKSLGFIVGKHKVPWSLKSVRNGSDISSPSSIENKGASDVEVEDARSISELLDAIQLDEVTPIFYAFLP

Query:  HKKFRKSSPGDPNFMVYLTRGYLPSKEDIEVLEGTSRGIPMKYCHVEHGRVCFFSFDKVELPILP
        H KFRKSSPGDPNFMVYLTRGY PSK+D+EVL  TSRGIPMKYCHVEHGRVCFFSFD VELPILP
Subjt:  HKKFRKSSPGDPNFMVYLTRGYLPSKEDIEVLEGTSRGIPMKYCHVEHGRVCFFSFDKVELPILP

TrEMBL top hitse value%identityAlignment
A0A0A0KXV5 tRNA_int_end_N2 domain-containing protein3.9e-13288.76Show/hide
Query:  MEATDWESSSGGAS--GDEDNYEQDINDEEECLCASGYLRKLQFRKHASMARWNDQMGMAEVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLL
        MEAT+WESSSGGAS  GDEDNYEQDINDEEECL ASG LRKLQFRKHAS ARWNDQMGMAEVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLL
Subjt:  MEATDWESSSGGAS--GDEDNYEQDINDEEECLCASGYLRKLQFRKHASMARWNDQMGMAEVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLL

Query:  DHDNSSLSLKDVYKKVAEGKSGCLWEQFEVYRHLKSLGFIVGKHKVPWSLKSVRNGSDISSPSSIENKGASDVEVEDARSISELLDAIQLDEVTPIFYAF
        DHDNSSLSLKDVYKKVAEG+SG LWEQFEVYRHLKSLG+IVGKH+VPWSLK+VRN  DISSPSS ENKGASDV+ +D +SI  LL+AIQLDEVTPIF  F
Subjt:  DHDNSSLSLKDVYKKVAEGKSGCLWEQFEVYRHLKSLGFIVGKHKVPWSLKSVRNGSDISSPSSIENKGASDVEVEDARSISELLDAIQLDEVTPIFYAF

Query:  LPHKKFRKSSPGDPNFMVYLTRGYLPSKEDIEVLEGTSRGIPMKYCHVEHGRVCFFSFDKVELPILP
        LPH KFRKSSPGDPNFMV LTRGY PSKE+IEVLE TSRGIPMKYCHVEHGRVCFFSFDKVELP+LP
Subjt:  LPHKKFRKSSPGDPNFMVYLTRGYLPSKEDIEVLEGTSRGIPMKYCHVEHGRVCFFSFDKVELPILP

A0A1S4E447 uncharacterized protein LOC1035014741.2e-12586.54Show/hide
Query:  MEATDWESSSGGAS--GDEDNYEQDINDEEECLCASGYLRKLQFRKHASMARWNDQMGMAEVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLL
        MEAT+W+SSSGGAS  GDEDNYEQDINDEEECL AS  LRKLQFRKHAS ARWNDQMGMAEVLENKGSLWTTTGIVRCGKIYC+IEETLFLIEVGALHLL
Subjt:  MEATDWESSSGGAS--GDEDNYEQDINDEEECLCASGYLRKLQFRKHASMARWNDQMGMAEVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLL

Query:  DHDNSSLSLKDVYKKVAEGKSGCLWEQFEVYRHLKSLGFIVGKHKVPWSLKSVRNGSDISSPSSIENKGASDVEVEDARSISELLDAIQLDEVTPIFYAF
        DHDNS+LSLKDVYKKVAEG+SGC+WEQFEVYRHLKSLG+IVGKHKVPWSLK+VRN  D+SSPSS E KG SDV+ ED + IS LL+AIQLDEVTPIF  F
Subjt:  DHDNSSLSLKDVYKKVAEGKSGCLWEQFEVYRHLKSLGFIVGKHKVPWSLKSVRNGSDISSPSSIENKGASDVEVEDARSISELLDAIQLDEVTPIFYAF

Query:  LPHKKFRKSSPGDPNFMVYLTRGYLPSKEDIEVLEGTSRGIPMKYCHVEHGRVCFFSFDK
        LPH KFRKSSPGDPNFMV L RGY PSKE+IEVLE TSRGIPMKYCHVEHGRVCFFSFDK
Subjt:  LPHKKFRKSSPGDPNFMVYLTRGYLPSKEDIEVLEGTSRGIPMKYCHVEHGRVCFFSFDK

A0A6J1DRN3 uncharacterized protein LOC1110236602.4e-12985.28Show/hide
Query:  MEATDWESSSGGASGDEDNYEQDINDEEECLCASGYLRKLQFRKHASMARWNDQMGMAEVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLLDH
        MEATDWESSSGGASGD++ YEQD+ DEEECLCASG +RKLQFRKHAS ARWNDQMGMAEVLEN+GSLWTTTGIVRCGKIYCS EETLFL+EVGALHLLDH
Subjt:  MEATDWESSSGGASGDEDNYEQDINDEEECLCASGYLRKLQFRKHASMARWNDQMGMAEVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLLDH

Query:  DNSSLSLKDVYKKVAEGKSGCLWEQFEVYRHLKSLGFIVGKHKVPWSLKSVRNGSDISSPSSIENKGASDVEVEDARSISELLDAIQLDEVTPIFYAFLP
        DNSSLSLKDVYKKVAEGK+GCLWEQFEVYRHLKSLGFIVGKHKVPWS+K VRNGSDIS  SSIEN+GA D+E +D RSISELL +IQLD+V PIF  FLP
Subjt:  DNSSLSLKDVYKKVAEGKSGCLWEQFEVYRHLKSLGFIVGKHKVPWSLKSVRNGSDISSPSSIENKGASDVEVEDARSISELLDAIQLDEVTPIFYAFLP

Query:  HKKFRKSSPGDPNFMVYLTRGYLPSKEDIEVLEGTSRGIPMKYCHVEHGRVCFFSFDKVELPILP
        H KFRKSSPGDPNFMV LTRGY P K+DIE LE TSRGI +KYCHVEHGRVCFFSFDK+ELP+LP
Subjt:  HKKFRKSSPGDPNFMVYLTRGYLPSKEDIEVLEGTSRGIPMKYCHVEHGRVCFFSFDKVELPILP

A0A6J1FKK4 tRNA-splicing endonuclease subunit Sen543.8e-12783.4Show/hide
Query:  MEATDWESSSGGASGDEDNYEQDINDEEECLCASGYLRKLQFRKHASMARWNDQMGMAEVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLLDH
        MEATDWE SSGGAS D+DN+EQDI +EEECLC+SG +RKLQFRKHAS ARWND+MGMAEVLENKGSLWTT+GIVRCGKIYCSIEETLFLIEVGALHLLDH
Subjt:  MEATDWESSSGGASGDEDNYEQDINDEEECLCASGYLRKLQFRKHASMARWNDQMGMAEVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLLDH

Query:  DNSSLSLKDVYKKVAEGKSGCLWEQFEVYRHLKSLGFIVGKHKVPWSLKSVRNGSDISSPSSIENKGASDVEVEDARSISELLDAIQLDEVTPIFYAFLP
        DNSSLSLKDVYKKVAEGKS C+WEQFEVYRHLKSLG+IVGKHKVPWS+K  +NG DISS SSIENKG++D   ED +SI EL+DAIQL+EVTPIF  +LP
Subjt:  DNSSLSLKDVYKKVAEGKSGCLWEQFEVYRHLKSLGFIVGKHKVPWSLKSVRNGSDISSPSSIENKGASDVEVEDARSISELLDAIQLDEVTPIFYAFLP

Query:  HKKFRKSSPGDPNFMVYLTRGYLPSKEDIEVLEGTSRGIPMKYCHVEHGRVCFFSFDKVELPILP
        H KFRKSSPGDPNFMV LTRGY P K DIEV+E  S GIPMKYCHVEHGRVCFFSFDKVELP+LP
Subjt:  HKKFRKSSPGDPNFMVYLTRGYLPSKEDIEVLEGTSRGIPMKYCHVEHGRVCFFSFDKVELPILP

A0A6J1I8D9 tRNA-splicing endonuclease subunit Sen54 isoform X31.6e-12582.64Show/hide
Query:  MEATDWESSSGGASGDEDNYEQDINDEEECLCASGYLRKLQFRKHASMARWNDQMGMAEVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLLDH
        MEATDWE SSGGAS D+DN+EQDI +EEECL +SG +RKLQFRKHAS ARWND+MGMAEVLENKGSLWTT+GIVRCGKIYCSIEETLFLIEVGALHLLDH
Subjt:  MEATDWESSSGGASGDEDNYEQDINDEEECLCASGYLRKLQFRKHASMARWNDQMGMAEVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLLDH

Query:  DNSSLSLKDVYKKVAEGKSGCLWEQFEVYRHLKSLGFIVGKHKVPWSLKSVRNGSDISSPSSIENKGASDVEVEDARSISELLDAIQLDEVTPIFYAFLP
        DNSSLSLKDVYKKVAEGKS C+WEQFEVYRHLKSLG+IVGKHKVPWS+K  RNG DISS SSIENKG++D E ED +SI ELL+A+QL+E+TPIF  +LP
Subjt:  DNSSLSLKDVYKKVAEGKSGCLWEQFEVYRHLKSLGFIVGKHKVPWSLKSVRNGSDISSPSSIENKGASDVEVEDARSISELLDAIQLDEVTPIFYAFLP

Query:  HKKFRKSSPGDPNFMVYLTRGYLPSKEDIEVLEGTSRGIPMKYCHVEHGRVCFFSFDKVELPILP
        H KFRKSSPGDPNFMV LTRGY P K DIEV+E  S GIPMKYCHVEHGRVCFFSFDKV+LP+LP
Subjt:  HKKFRKSSPGDPNFMVYLTRGYLPSKEDIEVLEGTSRGIPMKYCHVEHGRVCFFSFDKVELPILP

SwissProt top hitse value%identityAlignment
O74908 Probable tRNA-splicing endonuclease subunit sen544.2e-0634.62Show/hide
Query:  LRKLQFRKHASMARWNDQMGMAEVLENKGSLWTTTGIVRC-GKIYCSIEETLFLIEVGALHLLDHDNSSLSLKDVYKKVAEGKSGCLWEQFEVYRHLKSL
        + +L   KHA +A WN Q GM+ V +  G L+ T G      +++   EETL+L+E G++     +   +SL+ VY   +    G L E + VY HL+  
Subjt:  LRKLQFRKHASMARWNDQMGMAEVLENKGSLWTTTGIVRC-GKIYCSIEETLFLIEVGALHLLDHDNSSLSLKDVYKKVAEGKSGCLWEQFEVYRHLKSL

Query:  GFIV
        GF V
Subjt:  GFIV

Q74ZJ5 tRNA-splicing endonuclease subunit SEN541.3e-0430.39Show/hide
Query:  ARWNDQMGMAEVLENKGSLWTTTGIV-RCGKIYCSIEETLFLIEVGAL----------HLLDHDNSSLSLKDVYKKVAEGKSGCLWEQFEVYRHLKSLGF
        A W ++  MA +   +GS   T G V + G+ +  + E ++L+E G +             +H++  LS++DVY   +  +     ++F VY HLK LGF
Subjt:  ARWNDQMGMAEVLENKGSLWTTTGIV-RCGKIYCSIEETLFLIEVGAL----------HLLDHDNSSLSLKDVYKKVAEGKSGCLWEQFEVYRHLKSLGF

Query:  IV
        IV
Subjt:  IV

Arabidopsis top hitse value%identityAlignment
AT3G02370.1 unknown protein8.5e-3947.5Show/hide
Query:  MAEVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLL-DHDNSSLSLKDVYKKVAEGKSGCLWEQFEVYRHLKSLGFIVGKHKVPWSLKSVRNGS
        MAEV   +G LWTTTGI+R GK YC IEE L+L E+G L LL D D+  +SLKD+Y ++AEGK GC WE +EVYR+LK LG+I+G+H VPW+ K   N  
Subjt:  MAEVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLL-DHDNSSLSLKDVYKKVAEGKSGCLWEQFEVYRHLKSLGFIVGKHKVPWSLKSVRNGS

Query:  DISSPSSIENKGASDVEVEDARSISELLDAIQLDEVTPIFYAFLPHKKFRKSSPGDPNFM
          ++PS  +    +    +D  S+++LL  + + +  P+F  +LP+ +F+KSSPG+P+F+
Subjt:  DISSPSSIENKGASDVEVEDARSISELLDAIQLDEVTPIFYAFLPHKKFRKSSPGDPNFM

AT3G02370.2 unknown protein2.4e-4146.29Show/hide
Query:  MAEVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLL-DHDNSSLSLKDVYKKVAEGKSGCLWEQFEVYRHLKSLGFIVGKHKVPWSLKSVRNGS
        MAEV   +G LWTTTGI+R GK YC IEE L+L E+G L LL D D+  +SLKD+Y ++AEGK GC WE +EVYR+LK LG+I+G+H VPW+ K   N  
Subjt:  MAEVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLL-DHDNSSLSLKDVYKKVAEGKSGCLWEQFEVYRHLKSLGFIVGKHKVPWSLKSVRNGS

Query:  DISSPSSIENKGASDVEVEDARSISELLDAIQLDEVTPIFYAFLPHKKFRKSSPGDPNFMVYLTRGYLPSKEDIE
          ++PS  +    +    +D  S+++LL  + + +  P+F  +LP+ +F+KSSPG+P+F+   +    PSKE+I+
Subjt:  DISSPSSIENKGASDVEVEDARSISELLDAIQLDEVTPIFYAFLPHKKFRKSSPGDPNFMVYLTRGYLPSKEDIE

AT3G57360.1 unknown protein5.7e-5943.77Show/hide
Query:  MEATDWESSSGGASGDEDNYEQDINDEEECLCASGYLRKLQFRKHASMARWNDQMGMAEVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLL-D
        ME  DWE+SS  +S +E  +    ND++E   + G + KLQFR  +S ARW  ++GMAEV   +G LWTTTGI+R GK YC IEE L+L E+G L +L +
Subjt:  MEATDWESSSGGASGDEDNYEQDINDEEECLCASGYLRKLQFRKHASMARWNDQMGMAEVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLL-D

Query:  HDNSSLSLKDVYKKVAEGKSGCLWEQFEVYRHLKSLGFIVGKHKVPWSLKSVRNGSDISSPSSIENKGASDVEVEDARSISELLDAIQLDEVTPIFYAFL
         D+  + LKD+Y+K+AE KSGC WE +EVYR+LK LG+I+G+H V W+LK      D + P+  E    +     D  ++++LL  +Q+ +   +F  +L
Subjt:  HDNSSLSLKDVYKKVAEGKSGCLWEQFEVYRHLKSLGFIVGKHKVPWSLKSVRNGSDISSPSSIENKGASDVEVEDARSISELLDAIQLDEVTPIFYAFL

Query:  PHKKFRKSSPGDPNFMVYLTRGYLPSKEDIEVLEGTSRGIPMKYCHVEHGRVCFFSFDKVELPIL
        P+ +F+KSSPG+P+F+   +    PSKEDI+VL+      P+ +CH+  GR  FFSF  ++LP+L
Subjt:  PHKKFRKSSPGDPNFMVYLTRGYLPSKEDIEVLEGTSRGIPMKYCHVEHGRVCFFSFDKVELPIL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGCTACAGATTGGGAAAGCTCTTCAGGAGGAGCTAGTGGTGATGAAGACAATTACGAACAAGACATAAACGATGAAGAAGAATGTCTCTGTGCATCTGGGTACTT
GCGCAAGTTGCAATTCAGGAAACATGCTTCAATGGCTCGATGGAATGATCAAATGGGAATGGCAGAAGTTTTAGAGAACAAGGGCAGCCTTTGGACGACAACTGGCATTG
TACGTTGTGGCAAGATTTATTGTTCCATTGAAGAAACTTTATTTCTTATTGAAGTTGGGGCCCTTCATCTTTTGGATCATGATAATTCAAGTCTTTCTTTGAAAGATGTA
TATAAAAAAGTAGCTGAAGGAAAAAGTGGGTGCCTTTGGGAGCAGTTTGAGGTTTATAGGCACCTCAAATCTCTTGGTTTCATTGTTGGAAAGCATAAAGTTCCTTGGTC
TCTGAAGAGTGTTAGGAATGGCAGTGATATTTCATCTCCGAGTTCTATTGAAAACAAAGGTGCATCAGATGTCGAAGTAGAAGATGCGAGGTCGATTTCCGAACTATTAG
ATGCCATTCAGCTCGATGAAGTAACACCCATTTTTTATGCTTTTCTTCCACATAAAAAATTTAGAAAGTCTTCTCCTGGTGACCCAAATTTTATGGTCTACTTGACGAGG
GGATATCTACCTTCAAAAGAAGATATTGAAGTTCTTGAGGGAACATCCAGAGGCATTCCAATGAAATATTGTCATGTTGAACATGGACGAGTCTGCTTCTTTTCATTTGA
CAAGGTGGAACTCCCTATCTTACCTTGA
mRNA sequenceShow/hide mRNA sequence
AACGCGTACCCTTGCACGTGTGAAGTTTTTGTGTGCTCCCGTCACACCCACACACTACCTCTGCCCCACTCCACCGTTTGCGCCGCCTCGTTCCGTCTTGATCCGCCGTG
CTCAGGCCAACTGCGCCGCCACTGTGAACCTGGTCGCACCGTCACTGCAAGTTCCCCGGATCTCCGGCCATCGCCCAGTCACTTTCGAGACCAACGCCGCGAGCGTTTTG
TGACGTTTCGATTCGAGAAGTCTTAGGGGTTTAGCGTGCTGTCCACCAGTGCTTAAGGACGTTTGGCGACTTTTTCTGATATTTGATCGATGGAGGCTACAGATTGGGAA
AGCTCTTCAGGAGGAGCTAGTGGTGATGAAGACAATTACGAACAAGACATAAACGATGAAGAAGAATGTCTCTGTGCATCTGGGTACTTGCGCAAGTTGCAATTCAGGAA
ACATGCTTCAATGGCTCGATGGAATGATCAAATGGGAATGGCAGAAGTTTTAGAGAACAAGGGCAGCCTTTGGACGACAACTGGCATTGTACGTTGTGGCAAGATTTATT
GTTCCATTGAAGAAACTTTATTTCTTATTGAAGTTGGGGCCCTTCATCTTTTGGATCATGATAATTCAAGTCTTTCTTTGAAAGATGTATATAAAAAAGTAGCTGAAGGA
AAAAGTGGGTGCCTTTGGGAGCAGTTTGAGGTTTATAGGCACCTCAAATCTCTTGGTTTCATTGTTGGAAAGCATAAAGTTCCTTGGTCTCTGAAGAGTGTTAGGAATGG
CAGTGATATTTCATCTCCGAGTTCTATTGAAAACAAAGGTGCATCAGATGTCGAAGTAGAAGATGCGAGGTCGATTTCCGAACTATTAGATGCCATTCAGCTCGATGAAG
TAACACCCATTTTTTATGCTTTTCTTCCACATAAAAAATTTAGAAAGTCTTCTCCTGGTGACCCAAATTTTATGGTCTACTTGACGAGGGGATATCTACCTTCAAAAGAA
GATATTGAAGTTCTTGAGGGAACATCCAGAGGCATTCCAATGAAATATTGTCATGTTGAACATGGACGAGTCTGCTTCTTTTCATTTGACAAGGTGGAACTCCCTATCTT
ACCTTGACATTGTTGTGGATTGCACTGCTATTTAGTATTTGGAATGTCATTTGAATTCGGGTTCTTCTTCTCTTACTTCTTGAAGTTCGAAGAAAATTAGAATTTAGCCT
CTATAGTTTATAATTTGCATTTAGTCTGTTTCGTAGGGACTATTTATGGAGTTTTATAAAACTATAAGCACTAAATTTCAACTTTTAAACCGTAAGGATTAAATTTT
Protein sequenceShow/hide protein sequence
MEATDWESSSGGASGDEDNYEQDINDEEECLCASGYLRKLQFRKHASMARWNDQMGMAEVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLLDHDNSSLSLKDV
YKKVAEGKSGCLWEQFEVYRHLKSLGFIVGKHKVPWSLKSVRNGSDISSPSSIENKGASDVEVEDARSISELLDAIQLDEVTPIFYAFLPHKKFRKSSPGDPNFMVYLTR
GYLPSKEDIEVLEGTSRGIPMKYCHVEHGRVCFFSFDKVELPILP