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Lsi01G016780 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G016780
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionBTB domain-containing protein
Genome locationchr01:15348669..15353494
RNA-Seq ExpressionLsi01G016780
SyntenyLsi01G016780
Gene Ontology termsGO:0051260 - protein homooligomerization (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR000210 - BTB/POZ domain
IPR003131 - Potassium channel tetramerisation-type BTB domain
IPR011333 - SKP1/BTB/POZ domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004149113.1 FH protein interacting protein FIP2 isoform X2 [Cucumis sativus]4.3e-4389.11Show/hide
Query:  MKGASDPSLVRLNIGGKKFRTTLDTLTQREPDSMLAAMFSGRHTLCQDPEEVRVFSGSVFLDRDGKHFRHILNWLRDGIVPILSDSDTVELLREAEYYQL
        MKG SDPSL+RLNIGGKKFRTTLDTLTQREPDSMLAAMFSGRHTLCQDPEE     GSVFLDRDGKHFRHILNWLRDGIVP LSD D  ELLREAEYYQL
Subjt:  MKGASDPSLVRLNIGGKKFRTTLDTLTQREPDSMLAAMFSGRHTLCQDPEEVRVFSGSVFLDRDGKHFRHILNWLRDGIVPILSDSDTVELLREAEYYQL

Query:  L
        L
Subjt:  L

XP_008441998.1 PREDICTED: FH protein interacting protein FIP2 isoform X1 [Cucumis melo]1.6e-4287.13Show/hide
Query:  MKGASDPSLVRLNIGGKKFRTTLDTLTQREPDSMLAAMFSGRHTLCQDPEEVRVFSGSVFLDRDGKHFRHILNWLRDGIVPILSDSDTVELLREAEYYQL
        MKG SDPSL+RLNIGGKKFRTTLDTLT REPDSMLAAMFSGRHTLCQDPEE     GS+FLDRDGKHFRHILNWLRDGIVP LSD D +ELLREAEYYQL
Subjt:  MKGASDPSLVRLNIGGKKFRTTLDTLTQREPDSMLAAMFSGRHTLCQDPEEVRVFSGSVFLDRDGKHFRHILNWLRDGIVPILSDSDTVELLREAEYYQL

Query:  L
        L
Subjt:  L

XP_008441999.1 PREDICTED: FH protein interacting protein FIP2 isoform X2 [Cucumis melo]1.6e-4287.13Show/hide
Query:  MKGASDPSLVRLNIGGKKFRTTLDTLTQREPDSMLAAMFSGRHTLCQDPEEVRVFSGSVFLDRDGKHFRHILNWLRDGIVPILSDSDTVELLREAEYYQL
        MKG SDPSL+RLNIGGKKFRTTLDTLT REPDSMLAAMFSGRHTLCQDPEE     GS+FLDRDGKHFRHILNWLRDGIVP LSD D +ELLREAEYYQL
Subjt:  MKGASDPSLVRLNIGGKKFRTTLDTLTQREPDSMLAAMFSGRHTLCQDPEEVRVFSGSVFLDRDGKHFRHILNWLRDGIVPILSDSDTVELLREAEYYQL

Query:  L
        L
Subjt:  L

XP_011653465.1 FH protein interacting protein FIP2 isoform X1 [Cucumis sativus]4.3e-4389.11Show/hide
Query:  MKGASDPSLVRLNIGGKKFRTTLDTLTQREPDSMLAAMFSGRHTLCQDPEEVRVFSGSVFLDRDGKHFRHILNWLRDGIVPILSDSDTVELLREAEYYQL
        MKG SDPSL+RLNIGGKKFRTTLDTLTQREPDSMLAAMFSGRHTLCQDPEE     GSVFLDRDGKHFRHILNWLRDGIVP LSD D  ELLREAEYYQL
Subjt:  MKGASDPSLVRLNIGGKKFRTTLDTLTQREPDSMLAAMFSGRHTLCQDPEEVRVFSGSVFLDRDGKHFRHILNWLRDGIVPILSDSDTVELLREAEYYQL

Query:  L
        L
Subjt:  L

XP_011653467.1 FH protein interacting protein FIP2 isoform X3 [Cucumis sativus]4.3e-4389.11Show/hide
Query:  MKGASDPSLVRLNIGGKKFRTTLDTLTQREPDSMLAAMFSGRHTLCQDPEEVRVFSGSVFLDRDGKHFRHILNWLRDGIVPILSDSDTVELLREAEYYQL
        MKG SDPSL+RLNIGGKKFRTTLDTLTQREPDSMLAAMFSGRHTLCQDPEE     GSVFLDRDGKHFRHILNWLRDGIVP LSD D  ELLREAEYYQL
Subjt:  MKGASDPSLVRLNIGGKKFRTTLDTLTQREPDSMLAAMFSGRHTLCQDPEEVRVFSGSVFLDRDGKHFRHILNWLRDGIVPILSDSDTVELLREAEYYQL

Query:  L
        L
Subjt:  L

TrEMBL top hitse value%identityAlignment
A0A0A0L1A8 BTB domain-containing protein2.1e-4389.11Show/hide
Query:  MKGASDPSLVRLNIGGKKFRTTLDTLTQREPDSMLAAMFSGRHTLCQDPEEVRVFSGSVFLDRDGKHFRHILNWLRDGIVPILSDSDTVELLREAEYYQL
        MKG SDPSL+RLNIGGKKFRTTLDTLTQREPDSMLAAMFSGRHTLCQDPEE     GSVFLDRDGKHFRHILNWLRDGIVP LSD D  ELLREAEYYQL
Subjt:  MKGASDPSLVRLNIGGKKFRTTLDTLTQREPDSMLAAMFSGRHTLCQDPEEVRVFSGSVFLDRDGKHFRHILNWLRDGIVPILSDSDTVELLREAEYYQL

Query:  L
        L
Subjt:  L

A0A1S3B4N8 FH protein interacting protein FIP2 isoform X17.9e-4387.13Show/hide
Query:  MKGASDPSLVRLNIGGKKFRTTLDTLTQREPDSMLAAMFSGRHTLCQDPEEVRVFSGSVFLDRDGKHFRHILNWLRDGIVPILSDSDTVELLREAEYYQL
        MKG SDPSL+RLNIGGKKFRTTLDTLT REPDSMLAAMFSGRHTLCQDPEE     GS+FLDRDGKHFRHILNWLRDGIVP LSD D +ELLREAEYYQL
Subjt:  MKGASDPSLVRLNIGGKKFRTTLDTLTQREPDSMLAAMFSGRHTLCQDPEEVRVFSGSVFLDRDGKHFRHILNWLRDGIVPILSDSDTVELLREAEYYQL

Query:  L
        L
Subjt:  L

A0A1S3B4Q0 FH protein interacting protein FIP2 isoform X27.9e-4387.13Show/hide
Query:  MKGASDPSLVRLNIGGKKFRTTLDTLTQREPDSMLAAMFSGRHTLCQDPEEVRVFSGSVFLDRDGKHFRHILNWLRDGIVPILSDSDTVELLREAEYYQL
        MKG SDPSL+RLNIGGKKFRTTLDTLT REPDSMLAAMFSGRHTLCQDPEE     GS+FLDRDGKHFRHILNWLRDGIVP LSD D +ELLREAEYYQL
Subjt:  MKGASDPSLVRLNIGGKKFRTTLDTLTQREPDSMLAAMFSGRHTLCQDPEEVRVFSGSVFLDRDGKHFRHILNWLRDGIVPILSDSDTVELLREAEYYQL

Query:  L
        L
Subjt:  L

A0A6J1DJV1 FH protein interacting protein FIP2 isoform X23.9e-4288.24Show/hide
Query:  MKGASDP-SLVRLNIGGKKFRTTLDTLTQREPDSMLAAMFSGRHTLCQDPEEVRVFSGSVFLDRDGKHFRHILNWLRDGIVPILSDSDTVELLREAEYYQ
        MKG SDP SLVRLNIGGKKFRTTLDTLTQREPDSMLAAMFSGRHTLCQDPEE     GSVF+DRDGKHFRHILNWLRDGIVP LSDS+  ELLREAEYYQ
Subjt:  MKGASDP-SLVRLNIGGKKFRTTLDTLTQREPDSMLAAMFSGRHTLCQDPEEVRVFSGSVFLDRDGKHFRHILNWLRDGIVPILSDSDTVELLREAEYYQ

Query:  LL
        LL
Subjt:  LL

A0A6J1DMD8 FH protein interacting protein FIP2 isoform X13.9e-4288.24Show/hide
Query:  MKGASDP-SLVRLNIGGKKFRTTLDTLTQREPDSMLAAMFSGRHTLCQDPEEVRVFSGSVFLDRDGKHFRHILNWLRDGIVPILSDSDTVELLREAEYYQ
        MKG SDP SLVRLNIGGKKFRTTLDTLTQREPDSMLAAMFSGRHTLCQDPEE     GSVF+DRDGKHFRHILNWLRDGIVP LSDS+  ELLREAEYYQ
Subjt:  MKGASDP-SLVRLNIGGKKFRTTLDTLTQREPDSMLAAMFSGRHTLCQDPEEVRVFSGSVFLDRDGKHFRHILNWLRDGIVPILSDSDTVELLREAEYYQ

Query:  LL
        LL
Subjt:  LL

SwissProt top hitse value%identityAlignment
Q7TPL3 BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 32.3e-1550.51Show/hide
Query:  KGASDPS-LVRLNIGGKKFRTTLDTLTQREPDSMLAAMFSGRHTLCQDPEEVRVFSGSVFLDRDGKHFRHILNWLRDGIVPI-LSDSDTVELLREAEYY
        KGAS  S  V+LN+GG  + TT+ TLT++  D+ML AMFSGR  +  D E      G + +DR GKHF  ILN+LRDG VP+  S  +  ELL EA+YY
Subjt:  KGASDPS-LVRLNIGGKKFRTTLDTLTQREPDSMLAAMFSGRHTLCQDPEEVRVFSGSVFLDRDGKHFRHILNWLRDGIVPI-LSDSDTVELLREAEYY

Q8BJK1 BTB/POZ domain-containing protein KCTD73.3e-1447.87Show/hide
Query:  PSLVRLNIGGKKFRTTLDTLTQREPDSMLAAMFSGRHTLCQDPEEVRVFSGSVFLDRDGKHFRHILNWLRDGIVPILSDSDTVELLREAEYYQL
        P +V LNIGG  F T L TL +R  D+MLAAMFSGRH +  D E      G  F+DRDG HF  +LN+LR G +P       V   +EA+YY +
Subjt:  PSLVRLNIGGKKFRTTLDTLTQREPDSMLAAMFSGRHTLCQDPEEVRVFSGSVFLDRDGKHFRHILNWLRDGIVPILSDSDTVELLREAEYYQL

Q922M3 BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 35.1e-1550.51Show/hide
Query:  KGASDPS-LVRLNIGGKKFRTTLDTLTQREPDSMLAAMFSGRHTLCQDPEEVRVFSGSVFLDRDGKHFRHILNWLRDGIVPI-LSDSDTVELLREAEYY
        KGAS  S  V+LN+GG  + TT+ TLT++  D+ML AMFSGR  +  D E      G + +DR GKHF  ILN+LRDG VP+  S  +  ELL EA+YY
Subjt:  KGASDPS-LVRLNIGGKKFRTTLDTLTQREPDSMLAAMFSGRHTLCQDPEEVRVFSGSVFLDRDGKHFRHILNWLRDGIVPI-LSDSDTVELLREAEYY

Q9H3F6 BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 36.7e-1549.49Show/hide
Query:  KGASDPS-LVRLNIGGKKFRTTLDTLTQREPDSMLAAMFSGRHTLCQDPEEVRVFSGSVFLDRDGKHFRHILNWLRDGIVPI-LSDSDTVELLREAEYY
        KG S  S  V+LN+GG  + TT+ TLT++  D+ML AMFSGR  +  D E      G + +DR GKHF  ILN+LRDG VP+  S  +  ELL EA+YY
Subjt:  KGASDPS-LVRLNIGGKKFRTTLDTLTQREPDSMLAAMFSGRHTLCQDPEEVRVFSGSVFLDRDGKHFRHILNWLRDGIVPI-LSDSDTVELLREAEYY

Q9SE95 FH protein interacting protein FIP24.4e-3574.47Show/hide
Query:  SLVRLNIGGKKFRTTLDTLTQREPDSMLAAMFSGRHTLCQDPEEVRVFSGSVFLDRDGKHFRHILNWLRDGIVPILSDSDTVELLREAEYYQLL
        S+VRLNIGGKKF TT+DTLT REPDSMLAAMFSGRH +CQ+ ++     G VF+DRDGKHFRHILNWLRDG++P LSD D  ELLREA+YYQLL
Subjt:  SLVRLNIGGKKFRTTLDTLTQREPDSMLAAMFSGRHTLCQDPEEVRVFSGSVFLDRDGKHFRHILNWLRDGIVPILSDSDTVELLREAEYYQLL

Arabidopsis top hitse value%identityAlignment
AT5G41330.1 BTB/POZ domain with WD40/YVTN repeat-like protein1.1e-0431.91Show/hide
Query:  DPSLVRLNIGGKKFRTTLDTLTQREPDSMLAAMFSGRHTLCQDPEEVRVFSGSVFLDRDGKHFRHILNWLRDGIVPILSDS-DTVELLREAEYY
        + ++V +N+GG+ F+TT  TL+    DS+L+ + +         E  R      F+DRD   F  +L  LR G +P  S + D  +L+ E+ YY
Subjt:  DPSLVRLNIGGKKFRTTLDTLTQREPDSMLAAMFSGRHTLCQDPEEVRVFSGSVFLDRDGKHFRHILNWLRDGIVPILSDS-DTVELLREAEYY

AT5G55000.1 potassium channel tetramerisation domain-containing protein / pentapeptide repeat-containing protein3.2e-3674.47Show/hide
Query:  SLVRLNIGGKKFRTTLDTLTQREPDSMLAAMFSGRHTLCQDPEEVRVFSGSVFLDRDGKHFRHILNWLRDGIVPILSDSDTVELLREAEYYQLL
        S+VRLNIGGKKF TT+DTLT REPDSMLAAMFSGRH +CQ+ ++     G VF+DRDGKHFRHILNWLRDG++P LSD D  ELLREA+YYQLL
Subjt:  SLVRLNIGGKKFRTTLDTLTQREPDSMLAAMFSGRHTLCQDPEEVRVFSGSVFLDRDGKHFRHILNWLRDGIVPILSDSDTVELLREAEYYQLL

AT5G55000.2 potassium channel tetramerisation domain-containing protein / pentapeptide repeat-containing protein3.2e-3674.47Show/hide
Query:  SLVRLNIGGKKFRTTLDTLTQREPDSMLAAMFSGRHTLCQDPEEVRVFSGSVFLDRDGKHFRHILNWLRDGIVPILSDSDTVELLREAEYYQLL
        S+VRLNIGGKKF TT+DTLT REPDSMLAAMFSGRH +CQ+ ++     G VF+DRDGKHFRHILNWLRDG++P LSD D  ELLREA+YYQLL
Subjt:  SLVRLNIGGKKFRTTLDTLTQREPDSMLAAMFSGRHTLCQDPEEVRVFSGSVFLDRDGKHFRHILNWLRDGIVPILSDSDTVELLREAEYYQLL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGGGGCCTCTGATCCTTCTCTGGTTCGCCTCAACATTGGTGGGAAGAAATTTAGAACAACATTAGATACATTGACTCAGCGGGAACCTGATTCGATGCTAGCTGC
AATGTTTAGTGGCCGTCATACATTATGCCAGGATCCAGAGGAGGTGCGTGTTTTCAGTGGATCTGTCTTTTTGGATAGGGATGGGAAACATTTTCGACACATTCTCAACT
GGTTAAGGGATGGGATAGTTCCAATTCTTTCCGACTCTGACACCGTAGAGCTTCTGCGAGAGGCAGAGTACTATCAGTTGCTTCTTCGTTTCAATTTTCACCTGCAGAGT
TGCAATCTTCCTCCCTCTCAGCTCATCAATGAAGGGGGCCTCTGA
mRNA sequenceShow/hide mRNA sequence
CAAAAATAGATACCTCAAAACAAAACCACGTTCTCGCTCTCTCTTCTCTCTTGTTTCCCATTCCAGCTTCGTTTCAATTTTCACCTGCAGAGTTGCAATCTTCCTCCCTC
TCAGCTCATCAATGAAGGGGGCCTCTGATCCTTCTCTGGTTCGCCTCAACATTGGTGGGAAGAAATTTAGAACAACATTAGATACATTGACTCAGCGGGAACCTGATTCG
ATGCTAGCTGCAATGTTTAGTGGCCGTCATACATTATGCCAGGATCCAGAGGAGGTGCGTGTTTTCAGTGGATCTGTCTTTTTGGATAGGGATGGGAAACATTTTCGACA
CATTCTCAACTGGTTAAGGGATGGGATAGTTCCAATTCTTTCCGACTCTGACACCGTAGAGCTTCTGCGAGAGGCAGAGTACTATCAGTTGCTTCTTCGTTTCAATTTTC
ACCTGCAGAGTTGCAATCTTCCTCCCTCTCAGCTCATCAATGAAGGGGGCCTCTGA
Protein sequenceShow/hide protein sequence
MKGASDPSLVRLNIGGKKFRTTLDTLTQREPDSMLAAMFSGRHTLCQDPEEVRVFSGSVFLDRDGKHFRHILNWLRDGIVPILSDSDTVELLREAEYYQLLLRFNFHLQS
CNLPPSQLINEGGL