CuGenDBv2

Gene ID	Lsi01G016880
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	Syntaxin-22-like protein
Genome location	chr01:15470352..15473362
RNA-Seq Expression	Lsi01G016880
Synteny	Lsi01G016880
Gene Ontology terms	GO:0000077 - DNA damage checkpoint (biological process) GO:0006281 - DNA repair (biological process) GO:0030896 - checkpoint clamp complex (cellular component)
InterPro domains	IPR003021 - Rad1/Rec1/Rad17

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_008442021.1 PREDICTED: uncharacterized protein LOC103486009 [Cucumis melo]

1.8e-145

88.04

Show/hide

Query:  MSSSAVDAEAPDLVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
        MSSSAVD EAPDLVCH DNVQGLVDAFTAVRWKRHQDA+IELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
Subjt:  MSSSAVDAEAPDLVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR

Query:  LSTIELKYPGPDMQLLLKSVDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQIALQPDPPSVTFKGEGHGDLQV-
        LSTIELKYPGPDMQLLLK+VDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSV IALQP PPSVTFK EGHGDLQV 
Subjt:  LSTIELKYPGPDMQLLLKSVDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQIALQPDPPSVTFKGEGHGDLQV-

Query:  ---------------------WYKYKFLRATTSNIPISVIRENRGSKLTIGRGGMLKVQHLVSVAKPTTSHPHIDSAGYQQPSRIAFIEFFVKPEEDATN
                              YKYKFLRATTSNIP SVIRENRGSKLTIGRGG+LKVQHLVSVAKP+TSH HIDSAGYQQPSRIAFIEFFVKPEED++N
Subjt:  ---------------------WYKYKFLRATTSNIPISVIRENRGSKLTIGRGGMLKVQHLVSVAKPTTSHPHIDSAGYQQPSRIAFIEFFVKPEEDATN

Query:  D
        D
Subjt:  D

XP_022957691.1 uncharacterized protein LOC111459157 isoform X1 [Cucurbita moschata]

1.9e-144

86.71

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Query:  MSSSAVDAEAPDLVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
        MSSSAVDA++PDLVC LDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRE+FIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
Subjt:  MSSSAVDAEAPDLVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR

Query:  LSTIELKYPGPDMQLLLKSVDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQIALQPDPPSVTFKGEGHGDLQV-
        LS +E+KYPGPDMQLLLKSVDS DACIYAEIRTRIP+TISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQI+L+P PPSVTFKGEGHGDLQV 
Subjt:  LSTIELKYPGPDMQLLLKSVDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQIALQPDPPSVTFKGEGHGDLQV-

Query:  ---------------------WYKYKFLRATTSNIPISVIRENRGSKLTIGRGGMLKVQHLVSVAKPTTSHPHIDSAGYQQPSRIAFIEFFVKPEEDATN
                              YKYKFLRATTSNIP SVIRENRGSKLTIGRGGMLKVQHLVSVA+P+TSHPHIDSAGYQQPSRIAFIEFFVKPEED T+
Subjt:  ---------------------WYKYKFLRATTSNIPISVIRENRGSKLTIGRGGMLKVQHLVSVAKPTTSHPHIDSAGYQQPSRIAFIEFFVKPEEDATN

Query:  D
        D
Subjt:  D

XP_022996322.1 uncharacterized protein LOC111491589 isoform X1 [Cucurbita maxima]

1.1e-144

87.38

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Query:  MSSSAVDAEAPDLVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
        MSSSAVDAEAPDLVC LDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRE+FIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
Subjt:  MSSSAVDAEAPDLVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR

Query:  LSTIELKYPGPDMQLLLKSVDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQIALQPDPPSVTFKGEGHGDLQV-
        LS +E+KYPGPDMQLLLKSVDSLDACIYAEIRTRIP+TISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQI+L+P PPSVTFKGEGHGDLQV 
Subjt:  LSTIELKYPGPDMQLLLKSVDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQIALQPDPPSVTFKGEGHGDLQV-

Query:  ---------------------WYKYKFLRATTSNIPISVIRENRGSKLTIGRGGMLKVQHLVSVAKPTTSHPHIDSAGYQQPSRIAFIEFFVKPEEDATN
                              YKYKFLRATTSNIP SVIRENRGSKLTIGRGGMLKVQHLVSVA+P+TSHPHIDSAGYQQ SRIAFIEFFVKPEED T+
Subjt:  ---------------------WYKYKFLRATTSNIPISVIRENRGSKLTIGRGGMLKVQHLVSVAKPTTSHPHIDSAGYQQPSRIAFIEFFVKPEEDATN

Query:  D
        D
Subjt:  D

XP_023534468.1 uncharacterized protein LOC111796019 isoform X1 [Cucurbita pepo subsp. pepo]

5.1e-145

87.04

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Query:  MSSSAVDAEAPDLVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
        MSSSAVDAEAPDLVC LDNVQGLVDAFTAVRWKRHQDAVIELSEHG+VLIVEESGCLQAKVYLQRE+FIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
Subjt:  MSSSAVDAEAPDLVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR

Query:  LSTIELKYPGPDMQLLLKSVDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQIALQPDPPSVTFKGEGHGDLQV-
        LS +E+KYPGPDMQLLLKSVDS DACIYAEIRTRIP+TISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQI+L+P PPSVTFKGEGHGDLQV 
Subjt:  LSTIELKYPGPDMQLLLKSVDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQIALQPDPPSVTFKGEGHGDLQV-

Query:  ---------------------WYKYKFLRATTSNIPISVIRENRGSKLTIGRGGMLKVQHLVSVAKPTTSHPHIDSAGYQQPSRIAFIEFFVKPEEDATN
                              YKYKFLRATTSNIP SVIRENRGSKLTIGRGGMLKVQHLVSVA+P+TSHPHIDSAGYQQPSRIAFIEFFVKPEED T+
Subjt:  ---------------------WYKYKFLRATTSNIPISVIRENRGSKLTIGRGGMLKVQHLVSVAKPTTSHPHIDSAGYQQPSRIAFIEFFVKPEEDATN

Query:  D
        D
Subjt:  D

XP_038882945.1 uncharacterized protein LOC120074039 isoform X1 [Benincasa hispida]

5.5e-147

89.7

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Query:  MSSSAVDAEAPDLVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
        MSSSAVD EAPDLVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
Subjt:  MSSSAVDAEAPDLVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR

Query:  LSTIELKYPGPDMQLLLKSVDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQIALQPDPPSVTFKGEGHGDLQV-
        LSTIE+KYPGPDMQLL KSVDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSV IALQPDPPSVTFKGEGHG+LQV 
Subjt:  LSTIELKYPGPDMQLLLKSVDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQIALQPDPPSVTFKGEGHGDLQV-

Query:  ---------------------WYKYKFLRATTSNIPISVIRENRGSKLTIGRGGMLKVQHLVSVAKPTTSHPHIDSAGYQQPSRIAFIEFFVKPEEDATN
                              YKYKFLRATTSNIP SVIRENRGSKLTIGRGGMLKVQHLVSVAKP+TSHPHIDSAGYQQPSRIAFIEFFVKP EDATN
Subjt:  ---------------------WYKYKFLRATTSNIPISVIRENRGSKLTIGRGGMLKVQHLVSVAKPTTSHPHIDSAGYQQPSRIAFIEFFVKPEEDATN

Query:  D
        D
Subjt:  D

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L199 Uncharacterized protein

9.4e-145

87.38

Show/hide

Query:  MSSSAVDAEAPDLVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
        MSSSAVD EAPDL+CH DNVQGLVDAFT+VRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
Subjt:  MSSSAVDAEAPDLVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR

Query:  LSTIELKYPGPDMQLLLKSVDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQIALQPDPPSVTFKGEGHGDLQV-
        LSTIELKYPGPDMQLLLK+VDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSV IALQP PPSVTFK EGHGDLQV 
Subjt:  LSTIELKYPGPDMQLLLKSVDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQIALQPDPPSVTFKGEGHGDLQV-

Query:  ---------------------WYKYKFLRATTSNIPISVIRENRGSKLTIGRGGMLKVQHLVSVAKPTTSHPHIDSAGYQQPSRIAFIEFFVKPEEDATN
                              YKYKFLRATTSNIP SVIRENRGSKLTIGRGG+LKVQHLVSV KP+TSH HIDSAGYQQPSRIAFIEFFVKPEED+ N
Subjt:  ---------------------WYKYKFLRATTSNIPISVIRENRGSKLTIGRGGMLKVQHLVSVAKPTTSHPHIDSAGYQQPSRIAFIEFFVKPEEDATN

Query:  D
        D
Subjt:  D

A0A1S3B4R8 uncharacterized protein LOC103486009

8.5e-146

88.04

Show/hide

Query:  MSSSAVDAEAPDLVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
        MSSSAVD EAPDLVCH DNVQGLVDAFTAVRWKRHQDA+IELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
Subjt:  MSSSAVDAEAPDLVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR

Query:  LSTIELKYPGPDMQLLLKSVDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQIALQPDPPSVTFKGEGHGDLQV-
        LSTIELKYPGPDMQLLLK+VDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSV IALQP PPSVTFK EGHGDLQV 
Subjt:  LSTIELKYPGPDMQLLLKSVDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQIALQPDPPSVTFKGEGHGDLQV-

Query:  ---------------------WYKYKFLRATTSNIPISVIRENRGSKLTIGRGGMLKVQHLVSVAKPTTSHPHIDSAGYQQPSRIAFIEFFVKPEEDATN
                              YKYKFLRATTSNIP SVIRENRGSKLTIGRGG+LKVQHLVSVAKP+TSH HIDSAGYQQPSRIAFIEFFVKPEED++N
Subjt:  ---------------------WYKYKFLRATTSNIPISVIRENRGSKLTIGRGGMLKVQHLVSVAKPTTSHPHIDSAGYQQPSRIAFIEFFVKPEEDATN

Query:  D
        D
Subjt:  D

A0A5D3DUR6 Syntaxin-22-like protein

8.5e-146

88.04

Show/hide

Query:  MSSSAVDAEAPDLVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
        MSSSAVD EAPDLVCH DNVQGLVDAFTAVRWKRHQDA+IELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
Subjt:  MSSSAVDAEAPDLVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR

Query:  LSTIELKYPGPDMQLLLKSVDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQIALQPDPPSVTFKGEGHGDLQV-
        LSTIELKYPGPDMQLLLK+VDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSV IALQP PPSVTFK EGHGDLQV 
Subjt:  LSTIELKYPGPDMQLLLKSVDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQIALQPDPPSVTFKGEGHGDLQV-

Query:  ---------------------WYKYKFLRATTSNIPISVIRENRGSKLTIGRGGMLKVQHLVSVAKPTTSHPHIDSAGYQQPSRIAFIEFFVKPEEDATN
                              YKYKFLRATTSNIP SVIRENRGSKLTIGRGG+LKVQHLVSVAKP+TSH HIDSAGYQQPSRIAFIEFFVKPEED++N
Subjt:  ---------------------WYKYKFLRATTSNIPISVIRENRGSKLTIGRGGMLKVQHLVSVAKPTTSHPHIDSAGYQQPSRIAFIEFFVKPEEDATN

Query:  D
        D
Subjt:  D

A0A6J1GZY3 uncharacterized protein LOC111459157 isoform X1

9.4e-145

86.71

Show/hide

Query:  MSSSAVDAEAPDLVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
        MSSSAVDA++PDLVC LDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRE+FIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
Subjt:  MSSSAVDAEAPDLVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR

Query:  LSTIELKYPGPDMQLLLKSVDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQIALQPDPPSVTFKGEGHGDLQV-
        LS +E+KYPGPDMQLLLKSVDS DACIYAEIRTRIP+TISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQI+L+P PPSVTFKGEGHGDLQV 
Subjt:  LSTIELKYPGPDMQLLLKSVDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQIALQPDPPSVTFKGEGHGDLQV-

Query:  ---------------------WYKYKFLRATTSNIPISVIRENRGSKLTIGRGGMLKVQHLVSVAKPTTSHPHIDSAGYQQPSRIAFIEFFVKPEEDATN
                              YKYKFLRATTSNIP SVIRENRGSKLTIGRGGMLKVQHLVSVA+P+TSHPHIDSAGYQQPSRIAFIEFFVKPEED T+
Subjt:  ---------------------WYKYKFLRATTSNIPISVIRENRGSKLTIGRGGMLKVQHLVSVAKPTTSHPHIDSAGYQQPSRIAFIEFFVKPEEDATN

Query:  D
        D
Subjt:  D

A0A6J1K1L0 uncharacterized protein LOC111491589 isoform X1

5.5e-145

87.38

Show/hide

Query:  MSSSAVDAEAPDLVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
        MSSSAVDAEAPDLVC LDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRE+FIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
Subjt:  MSSSAVDAEAPDLVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR

Query:  LSTIELKYPGPDMQLLLKSVDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQIALQPDPPSVTFKGEGHGDLQV-
        LS +E+KYPGPDMQLLLKSVDSLDACIYAEIRTRIP+TISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQI+L+P PPSVTFKGEGHGDLQV 
Subjt:  LSTIELKYPGPDMQLLLKSVDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQIALQPDPPSVTFKGEGHGDLQV-

Query:  ---------------------WYKYKFLRATTSNIPISVIRENRGSKLTIGRGGMLKVQHLVSVAKPTTSHPHIDSAGYQQPSRIAFIEFFVKPEEDATN
                              YKYKFLRATTSNIP SVIRENRGSKLTIGRGGMLKVQHLVSVA+P+TSHPHIDSAGYQQ SRIAFIEFFVKPEED T+
Subjt:  ---------------------WYKYKFLRATTSNIPISVIRENRGSKLTIGRGGMLKVQHLVSVAKPTTSHPHIDSAGYQQPSRIAFIEFFVKPEEDATN

Query:  D
        D
Subjt:  D

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G17760.1 damaged DNA binding;exodeoxyribonuclease IIIs

4.5e-123

71.38

Show/hide

Query:  SSSAVDAEAPDLVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGRL
        SS A++ + PDL+C LDNVQG+VDA T VRWKRHQDA++ELSEHGIVLIVEESGCLQAKVYLQRELF +YEY AQ RPRFG+SLG+ VD LNTFS PG  
Subjt:  SSSAVDAEAPDLVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGRL

Query:  STIELKYPGPDMQLLLKSVDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQIALQPDPPSVTFKGEGHGDLQV--
        +TIE+KYPGPDM+LLLKSVD+L++CIY+EIRTRIP+T++WDYNFE AG +PL+FTVKSAALKEAIDDLEWPGSSVQI+LQ +PP V F+GEGHGDLQ+  
Subjt:  STIELKYPGPDMQLLLKSVDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQIALQPDPPSVTFKGEGHGDLQV--

Query:  --------------------WYKYKFLRATTSNIPISVIRENRGSKLTIGRGGMLKVQHLVSVAKPTTSHPHIDSAGYQQPSRIAFIEFFVKPEEDA
                             YKYKFL+ATT+NIP +V+RENRGSKLTIGRGGMLKVQHLVSV+K     P ++SAGYQ PSRIA+IEFFVKPEE A
Subjt:  --------------------WYKYKFLRATTSNIPISVIRENRGSKLTIGRGGMLKVQHLVSVAKPTTSHPHIDSAGYQQPSRIAFIEFFVKPEEDA

AT4G17760.2 damaged DNA binding;exodeoxyribonuclease IIIs

2.9e-98

70.73

Show/hide

Query:  ESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGRLSTIELKYPGPDMQLLLKSVDSLDACIYAEIRTRIPDTISWDYNFEPAGSSP
        ESGCLQAKVYLQRELF +YEY AQ RPRFG+SLG+ VD LNTFS PG  +TIE+KYPGPDM+LLLKSVD+L++CIY+EIRTRIP+T++WDYNFE AG +P
Subjt:  ESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGRLSTIELKYPGPDMQLLLKSVDSLDACIYAEIRTRIPDTISWDYNFEPAGSSP

Query:  LSFTVKSAALKEAIDDLEWPGSSVQIALQPDPPSVTFKGEGHGDLQV----------------------WYKYKFLRATTSNIPISVIRENRGSKLTIGR
        L+FTVKSAALKEAIDDLEWPGSSVQI+LQ +PP V F+GEGHGDLQ+                       YKYKFL+ATT+NIP +V+RENRGSKLTIGR
Subjt:  LSFTVKSAALKEAIDDLEWPGSSVQIALQPDPPSVTFKGEGHGDLQV----------------------WYKYKFLRATTSNIPISVIRENRGSKLTIGR

Query:  GGMLKVQHLVSVAKPTTSHPHIDSAGYQQPSRIAFIEFFVKPEEDA
        GGMLKVQHLVSV+K     P ++SAGYQ PSRIA+IEFFVKPEE A
Subjt:  GGMLKVQHLVSVAKPTTSHPHIDSAGYQQPSRIAFIEFFVKPEEDA

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGAGCTCGTCGGCGGTGGATGCGGAGGCGCCCGATCTAGTTTGCCACCTTGACAACGTCCAAGGCCTGGTGGATGCCTTCACTGCCGTTCGATGGAAGCGCCATCAGGA
CGCCGTAATCGAACTATCGGAACATGGCATCGTTTTGATCGTTGAAGAATCCGGCTGTCTTCAGGCCAAAGTGTATCTGCAGCGTGAGCTTTTCATTCGTTATGAATACA
GTGCACAAGCTCGGCCTAGGTTTGGAGTGAGCTTAGGCATTTTTGTTGATAGTTTGAATACATTTTCTGTTCCTGGACGTTTAAGCACTATTGAGCTCAAATACCCGGGA
CCTGATATGCAACTTCTTCTCAAGTCAGTCGATTCGTTAGATGCTTGCATTTACGCGGAGATCAGAACCAGAATCCCAGATACGATCTCATGGGATTACAATTTTGAACC
TGCAGGAAGCAGCCCACTCAGTTTCACTGTCAAGTCTGCAGCACTTAAGGAAGCTATTGATGATCTTGAATGGCCTGGATCAAGTGTCCAGATAGCTCTACAACCGGATC
CCCCTTCTGTCACCTTCAAAGGCGAAGGCCATGGAGACTTGCAGGTATGGTACAAATACAAGTTTCTCCGTGCGACGACTTCGAACATACCGATCAGTGTGATAAGAGAA
AACAGGGGTAGCAAATTGACTATTGGAAGAGGAGGAATGCTAAAAGTTCAGCACCTTGTTTCTGTTGCAAAACCAACCACTTCACACCCACATATAGATTCTGCTGGTTA
TCAGCAACCCAGTAGAATTGCTTTCATTGAGTTCTTTGTAAAACCAGAAGAAGATGCCACAAATGACTAG

mRNA sequence

Show/hide mRNA sequence

CCTTAAACGCCAAATTTGGCTGAGCACATTCATAAAGTGGAAAAAAAAAAAAAAAGAAAACGGAGGGAGAAAATTCTCACCGGCAAAATTTGGCGGGAAAGCCGAAATCA
TGAGCTCGTCGGCGGTGGATGCGGAGGCGCCCGATCTAGTTTGCCACCTTGACAACGTCCAAGGCCTGGTGGATGCCTTCACTGCCGTTCGATGGAAGCGCCATCAGGAC
GCCGTAATCGAACTATCGGAACATGGCATCGTTTTGATCGTTGAAGAATCCGGCTGTCTTCAGGCCAAAGTGTATCTGCAGCGTGAGCTTTTCATTCGTTATGAATACAG
TGCACAAGCTCGGCCTAGGTTTGGAGTGAGCTTAGGCATTTTTGTTGATAGTTTGAATACATTTTCTGTTCCTGGACGTTTAAGCACTATTGAGCTCAAATACCCGGGAC
CTGATATGCAACTTCTTCTCAAGTCAGTCGATTCGTTAGATGCTTGCATTTACGCGGAGATCAGAACCAGAATCCCAGATACGATCTCATGGGATTACAATTTTGAACCT
GCAGGAAGCAGCCCACTCAGTTTCACTGTCAAGTCTGCAGCACTTAAGGAAGCTATTGATGATCTTGAATGGCCTGGATCAAGTGTCCAGATAGCTCTACAACCGGATCC
CCCTTCTGTCACCTTCAAAGGCGAAGGCCATGGAGACTTGCAGGTATGGTACAAATACAAGTTTCTCCGTGCGACGACTTCGAACATACCGATCAGTGTGATAAGAGAAA
ACAGGGGTAGCAAATTGACTATTGGAAGAGGAGGAATGCTAAAAGTTCAGCACCTTGTTTCTGTTGCAAAACCAACCACTTCACACCCACATATAGATTCTGCTGGTTAT
CAGCAACCCAGTAGAATTGCTTTCATTGAGTTCTTTGTAAAACCAGAAGAAGATGCCACAAATGACTAGTAGACCTTTTTCAAATATTATTTTTTGAACCTAGATGGAGT
AGAGATGTTTTAAATGTTGAACTATGTTTTAGGTTGGCGAGCCCTTTTGAATATCCCATTGGCTCTTTTTGGCCTCAGCAATGAAGCTTGCATTCGTAGGGGGTGTTTGG
AATGTATTTCCA

Protein sequence

Show/hide protein sequence

MSSSAVDAEAPDLVCHLDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGRLSTIELKYPG
PDMQLLLKSVDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVQIALQPDPPSVTFKGEGHGDLQVWYKYKFLRATTSNIPISVIRE
NRGSKLTIGRGGMLKVQHLVSVAKPTTSHPHIDSAGYQQPSRIAFIEFFVKPEEDATND

Lsi01G016880 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome