; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi01G016980 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G016980
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionProline-rich protein HaeIII subfamily 1-like
Genome locationchr01:15627206..15628134
RNA-Seq ExpressionLsi01G016980
SyntenyLsi01G016980
Gene Ontology termsGO:0010227 - floral organ abscission (biological process)
GO:0005615 - extracellular space (cellular component)
InterPro domainsIPR039639 - Protein IDA-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603169.1 hypothetical protein SDJN03_03778, partial [Cucurbita argyrosperma subsp. sororia]1.1e-3139.03Show/hide
Query:  ITIYHADAKNVFVVDEGDSIVENELSDQNIKHPKAHMHFSLGKPNRLENTIEVKDLKTIHLLHR-----MSHPSFYTSNL----GSTSEYYQKECGFLRL
        + +Y  DAK V  VD  D+I E EL+DQ +KHPK     S     R    +       + +L +      S PS  TS+        S     +   +  
Subjt:  ITIYHADAKNVFVVDEGDSIVENELSDQNIKHPKAHMHFSLGKPNRLENTIEVKDLKTIHLLHR-----MSHPSFYTSNL----GSTSEYYQKECGFLRL

Query:  GRVKELLRVHLSHRMSHPSFYTRNLGSTSEYYKKECVFLRLGRVKDFLRVHLPHHMSHPSFYTRNLGSTSEYYKGVRIPPSGPSQRTSNSPPPPP-HVSS
        G + + + +  S      S Y       S     +   +  G         LP                    KGV IPPSGPSQRTSN PPPPP H SS
Subjt:  GRVKELLRVHLSHRMSHPSFYTRNLGSTSEYYKKECVFLRLGRVKDFLRVHLPHHMSHPSFYTRNLGSTSEYYKGVRIPPSGPSQRTSNSPPPPP-HVSS

Query:  VVLHKESRINFGVLPKGVCIPPSGPSKRTFESPPPPPHVPSFVLHKESGINFGVLPKGVRIRPSRPSQR
        V+L+ +S+INFG+LPKGV IPPSGPS+RT + PPPPPH  SF+L+ +S INFG+LPKGV I PS PSQR
Subjt:  VVLHKESRINFGVLPKGVCIPPSGPSKRTFESPPPPPHVPSFVLHKESGINFGVLPKGVRIRPSRPSQR

XP_022967687.1 actin cytoskeleton-regulatory complex protein PAN1-like [Cucurbita maxima]2.5e-2868.42Show/hide
Query:  KGVRIPPSGPSQRTSNSPPPPPHVSSVVLHKESRINFGVLPKGVCIPPSGPSKRTFESPPPPPHVPSFVLHKESGINFGVLPKGVRIRPSRPSQR
        KGV IPPS PSQRTS+ PPPPP  SS++L+K S+IN G+LP+GV IPPSGPS+RT + PPPPPH  S +L+K+S INFG+LPKGV I PS PSQR
Subjt:  KGVRIPPSGPSQRTSNSPPPPPHVSSVVLHKESRINFGVLPKGVCIPPSGPSKRTFESPPPPPHVPSFVLHKESGINFGVLPKGVRIRPSRPSQR

XP_031744003.1 abl interactor homolog [Cucumis sativus]2.1e-2736.15Show/hide
Query:  VSFGACALVLFGLHITIYHADAKNVFVVDEGDSIVENELSDQNIKHPKAHMHFSLGKPNRLEN-------TIEVKDLKTIHLLHRMSHPSFYTSNLGSTS
        ++F  C LVL GL   +Y  +  N+F V+E +S+ ENE     I HPK H+ FS  K  R+ +        I  KD++          P F  S   S S
Subjt:  VSFGACALVLFGLHITIYHADAKNVFVVDEGDSIVENELSDQNIKHPKAHMHFSLGKPNRLEN-------TIEVKDLKTIHLLHRMSHPSFYTSNLGSTS

Query:  EYYQKECGFLRLGRVKELLRVHLSHRMSHPSFYTRNLGSTSEYYKKECVFLRLGRVK-DFLRVHLPHHMSHPS---------------FYTRNLGSTSEY
                 +     +    + L    +H S  ++    +        V  +  R+K   L   +P H S PS                +  +  +    
Subjt:  EYYQKECGFLRLGRVKELLRVHLSHRMSHPSFYTRNLGSTSEYYKKECVFLRLGRVK-DFLRVHLPHHMSHPS---------------FYTRNLGSTSEY

Query:  YKGVRIPPSGPSQRTSNSPPPPPHVSSVVLHKESRINFGVLPKGVCIPPSGPSKRTFESPPPPPHVPSFVLHKESGINFGVLPKGVRIRPSRPSQR
         KGV    SGPS+R S+SPP PP   S+VLHK+S I+FG+L KGV I  SGPS+R  +SPPPPP  PS VLHK+SGI+FG+LPKGVRI PS PS R
Subjt:  YKGVRIPPSGPSQRTSNSPPPPPHVSSVVLHKESRINFGVLPKGVCIPPSGPSKRTFESPPPPPHVPSFVLHKESGINFGVLPKGVRIRPSRPSQR

XP_031744042.1 proline-rich receptor-like protein kinase PERK9 [Cucumis sativus]3.2e-2836.08Show/hide
Query:  VSFGACALVLFGLHITIYHADAKNVFVVDEGDSIVENELSDQNIKHPKAHMHFSLGKPNRLENTIEVKDLKTIHLLHRM--SHPSFYTSNLGSTSEYYQK
        ++F  C LVL GL   +Y  +  N+F V+E +S++ENE     I HPK H+ FS  K  R+ +         +    R+  S PS  +S+          
Subjt:  VSFGACALVLFGLHITIYHADAKNVFVVDEGDSIVENELSDQNIKHPKAHMHFSLGKPNRLENTIEVKDLKTIHLLHRM--SHPSFYTSNLGSTSEYYQK

Query:  ECGFLRLGRVKELLRVHLSHRMSHPSFYTRNLGSTSEYYKKECVFLRLGRVK-DFLRVHLPHHMSHPS---------------FYTRNLGSTSEYYKGVR
        +   +  G + + +  H     S PS   +    +        V  +  R+K   L   +P H S PS                +  +  +     KGVR
Subjt:  ECGFLRLGRVKELLRVHLSHRMSHPSFYTRNLGSTSEYYKKECVFLRLGRVK-DFLRVHLPHHMSHPS---------------FYTRNLGSTSEYYKGVR

Query:  IPPSGPSQRTSNSPPPPPHVSSVVLHKESRINFGVLPKGVCIPPSGPSKRTFESPPPPPHVPSFVLHKESGINFGVLPKGVRIRPSRPSQR
           SGPS+R S+SPPPPP   S+VLHKESR+NFG+LPKGV    SGPS+R  +SPP PP  PS VLHK+SGI+FG+L +GV I  S PS+R
Subjt:  IPPSGPSQRTSNSPPPPPHVSSVVLHKESRINFGVLPKGVCIPPSGPSKRTFESPPPPPHVPSFVLHKESGINFGVLPKGVRIRPSRPSQR

XP_038882352.1 uncharacterized protein LOC120073615 [Benincasa hispida]2.6e-4644.06Show/hide
Query:  MASIGSSNVSFGACALVLFGLHITIYHADAKNVFVVDEGDSIVENELSDQNIKHPKAHMHFSLGKPNRLENTIEVKDLKTIHLLHRMSHPSFYTSNLGST
        M SI  SNV FGACA +  GLH TIY  DAKNVFVV++GDS +ENELSD+NIKHPK H+HFSLGK                                   
Subjt:  MASIGSSNVSFGACALVLFGLHITIYHADAKNVFVVDEGDSIVENELSDQNIKHPKAHMHFSLGKPNRLENTIEVKDLKTIHLLHRMSHPSFYTSNLGST

Query:  SEYYQKECGFLRLGRVKELLRVHLSHRMSHPSFYTRNLGSTSEYYKKECVFLRLGRVKDFLRVHLPHHMSHPSFYTRNLGSTSEYYKGVRIPPSGPSQRT
                                                    YK         R+ D            P F   NLG  S   K  R+PPSG SQ T
Subjt:  SEYYQKECGFLRLGRVKELLRVHLSHRMSHPSFYTRNLGSTSEYYKKECVFLRLGRVKDFLRVHLPHHMSHPSFYTRNLGSTSEYYKGVRIPPSGPSQRT

Query:  SNSPPPPPHVSSVVLHKESRINFGVLPKGVCIPPSGPSKRTFESPPPPPHVPSFVLHKESGINFGVLPKGVRIRPSRPSQRLFLNY
        S++PPPPPHV S++LHKESRINF VL KG  IPPSGPS+RT ESPPPPPH  S +LHK+ GINFG+LPK + I PS PS+R F NY
Subjt:  SNSPPPPPHVSSVVLHKESRINFGVLPKGVCIPPSGPSKRTFESPPPPPHVPSFVLHKESGINFGVLPKGVRIRPSRPSQRLFLNY

TrEMBL top hitse value%identityAlignment
A0A5A7T8R0 Uncharacterized protein4.3e-2636.05Show/hide
Query:  MGKHTAKMASIGSSNVSFGACALVLFGLHITIYHADAKNVFVVDEGDSIVENELSDQNIKHPKAHMHFSLGKPNRLENTIEVKDL--KTIHLLHRMSHPS
        M +   KM S  SSNV FG CAL+L GLH   YH DA++  V  EG+ ++EN+L+D  I+HPK H+ FS  KP R+ +      L   T  +L   S   
Subjt:  MGKHTAKMASIGSSNVSFGACALVLFGLHITIYHADAKNVFVVDEGDSIVENELSDQNIKHPKAHMHFSLGKPNRLENTIEVKDL--KTIHLLHRMSHPS

Query:  FYTSNLGSTSEYYQKECGFLRLGRVKEL-----LRVHLSHRMSHPSFYTRNLGSTSEYYKKECV---FLRLGRVKDFLRVHLPHHMSHPSFYTRNLGSTS
           + +     + +    + +  RV +L     L +  +H  + PS     LG +   + K  +   + +  RV D            P F      S  
Subjt:  FYTSNLGSTSEYYQKECGFLRLGRVKEL-----LRVHLSHRMSHPSFYTRNLGSTSEYYKKECV---FLRLGRVKDFLRVHLPHHMSHPSFYTRNLGSTS

Query:  EYYKGVRIPPSGPSQRTSNSPPPPPHVSSVVLHKESRINFGVLPKGVCIPPSGPSKRT
           K VR PP G SQRT ++P PPPH   ++LHK+S+I FG+LPKGV +PPSGPS RT
Subjt:  EYYKGVRIPPSGPSQRTSNSPPPPPHVSSVVLHKESRINFGVLPKGVCIPPSGPSKRT

A0A5D3BP86 Proline-rich protein HaeIII subfamily 1-like1.2e-2534.78Show/hide
Query:  SSNVSFGACALVLFGLHITIYHADAKNVFVVDEGDSIVENELSDQNIKHPKAHMHFSLGKPNRLENTIEVKDLKTIHLLHRMSHPSFYTSNLGSTSEYYQ
        SSN++F  CA+VL GLH  IY  + +N+F V E +S+ ENEL   +I HPK ++HFSL K                                        
Subjt:  SSNVSFGACALVLFGLHITIYHADAKNVFVVDEGDSIVENELSDQNIKHPKAHMHFSLGKPNRLENTIEVKDLKTIHLLHRMSHPSFYTSNLGSTSEYYQ

Query:  KECGFLRLGRVKELLRVHLSHRMSHPSFYTRNLGSTSEYYKKECVFLRLGRVKDFLRVHLPHHMSHPSFYTRNLGSTSEYYKGVRIPPSGPSQRTSNSPP
                                 P F T                 R G                             + K VRIPPSGPSQR+S+SPP
Subjt:  KECGFLRLGRVKELLRVHLSHRMSHPSFYTRNLGSTSEYYKKECVFLRLGRVKDFLRVHLPHHMSHPSFYTRNLGSTSEYYKGVRIPPSGPSQRTSNSPP

Query:  PPPHVSSVVLHKESRINFGVLPKGVCIPPSGPSKRTFESPPPPPHVPSFVLHKESGINFGVLPKGVRIRPSRPSQR
         P    S++L KESRINFG+LPKG  IPPSGPS+R  +SP P    PS  LHK S + FG+LPKG  I PS PS+R
Subjt:  PPPHVSSVVLHKESRINFGVLPKGVCIPPSGPSKRTFESPPPPPHVPSFVLHKESGINFGVLPKGVRIRPSRPSQR

A0A5D3BVE5 Uncharacterized protein1.2e-2537.8Show/hide
Query:  SSNVSFGACALVLFGLHITIYHADAKNVFVVDEGDSIVENELSDQNIKHPKAHMHFSLGKPNRLENTIEVKDL--KTIHLLHRMSHPSFYTSNLGSTSEY
        SSNV FGACAL+L G H   YH DA+   VV EG+ ++EN+L+D  I+HPK H+ FS  KP R+ +      L   T  +L   S      + +     +
Subjt:  SSNVSFGACALVLFGLHITIYHADAKNVFVVDEGDSIVENELSDQNIKHPKAHMHFSLGKPNRLENTIEVKDL--KTIHLLHRMSHPSFYTSNLGSTSEY

Query:  YQKECGFLRLGRVKEL-----LRVHLSHRMSHPSFYTRNLGSTSEYYKKECV---FLRLGRVKDFLRVHLPHHMSHPSFYTRNLGSTSEYYKGVRIPPSG
         +    + +  RV +L     L +  +H  + PS     LG +   + K  +   + +  RV D            P F   +LG  S   K VR PPSG
Subjt:  YQKECGFLRLGRVKEL-----LRVHLSHRMSHPSFYTRNLGSTSEYYKKECV---FLRLGRVKDFLRVHLPHHMSHPSFYTRNLGSTSEYYKGVRIPPSG

Query:  PSQRTSNSPPPPPHVSSVVLHKESRINFGVLPKGVCIPPSGPSKRT
         SQRT ++P  PPHV  ++LHK+SRI FG+LPKGV +P SGPS RT
Subjt:  PSQRTSNSPPPPPHVSSVVLHKESRINFGVLPKGVCIPPSGPSKRT

A0A5D3CGG1 Proline-rich protein HaeIII subfamily 1-like1.0e-2736.65Show/hide
Query:  MASIGSSNVSFGACALVLFGLHITIYHADAKNVFVVDEGDSIVENELSDQNIKHPKAHMHFSLGKPNRLENTIEVKDLKTIHLLHRMSHPSFYTSNLGST
        M S+G +N+ F ACAL+  GLH  IY  +AK  FVVDE +S +EN L    I HPK   HFS  KP +      + DL                      
Subjt:  MASIGSSNVSFGACALVLFGLHITIYHADAKNVFVVDEGDSIVENELSDQNIKHPKAHMHFSLGKPNRLENTIEVKDLKTIHLLHRMSHPSFYTSNLGST

Query:  SEYYQKECGFLRLGRVKELLRVHLSHRMSHPSFYTRNLGSTSEYYKKECVFLRLGRVKDFLRVHLPHHMSHPSFYTRNLGSTSEYYKGVRIPPSGPSQRT
                                                                               P F   +LG  S   KG+R PPSG SQ T
Subjt:  SEYYQKECGFLRLGRVKELLRVHLSHRMSHPSFYTRNLGSTSEYYKKECVFLRLGRVKDFLRVHLPHHMSHPSFYTRNLGSTSEYYKGVRIPPSGPSQRT

Query:  SNSPPPPPHVSSVVLHKESRINFGVLPKGVCIPPSGPSKRTFESPPPPPHVPSFVLHKESGINFGVLPKGVRIRPSRPSQR
        SN+ PP PHV+ ++LHKES +NFG+LPKGV IPPSGPS+RT  S PPPP + +F   KES I +G+LPKGVRI PS PS+R
Subjt:  SNSPPPPPHVSSVVLHKESRINFGVLPKGVCIPPSGPSKRTFESPPPPPHVPSFVLHKESGINFGVLPKGVRIRPSRPSQR

A0A6J1HRH7 actin cytoskeleton-regulatory complex protein PAN1-like1.2e-2868.42Show/hide
Query:  KGVRIPPSGPSQRTSNSPPPPPHVSSVVLHKESRINFGVLPKGVCIPPSGPSKRTFESPPPPPHVPSFVLHKESGINFGVLPKGVRIRPSRPSQR
        KGV IPPS PSQRTS+ PPPPP  SS++L+K S+IN G+LP+GV IPPSGPS+RT + PPPPPH  S +L+K+S INFG+LPKGV I PS PSQR
Subjt:  KGVRIPPSGPSQRTSNSPPPPPHVSSVVLHKESRINFGVLPKGVCIPPSGPSKRTFESPPPPPHVPSFVLHKESGINFGVLPKGVRIRPSRPSQR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAGAAGATGGGCAAACACACAGCAAAAATGGCGTCAATTGGTTCTTCTAATGTCTCTTTTGGAGCTTGTGCTCTCGTACTCTTTGGGTTACACATTACAATCTATCATGC
AGATGCCAAAAATGTTTTTGTAGTCGACGAAGGCGACTCTATTGTAGAAAATGAATTGAGTGACCAGAATATAAAGCATCCAAAAGCACACATGCATTTCTCTCTAGGGA
AACCCAACAGACTTGAGAATACTATCGAAGTAAAGGACCTTAAGACAATCCACCTCCTCCACCGCATGTCCCATCCATCGTTTTACACAAGCAATCTGGGATCAACTTCA
GAGTATTACCAAAAGGAATGTGGATTCCTCCGTTTGGGCCGAGTCAAAGAACTTCTAAGAGTCCACCTCTCCCACCGCATGTCTCATCCATCGTTTTACACAAGGAATCT
GGGATCAACTTCGGAGTATTACAAAAAGGAGTGCGTATTCCTCCGTTTGGGCCGAGTTAAAGATTTTCTGAGAGTCCACCTCCCCCACCACATGTCCCATCCGTCGTTTT
ACACAAGGAATCTGGGATCAACTTCGGAGTATTACAAAGGAGTGCGTATTCCTCCGTCTGGGCCGAGTCAAAGAACTTCTAACAGTCCACCTCCCCCACCACATGTCTCA
TCTGTCGTTTTACACAAGGAATCTAGGATCAACTTTGGAGTATTACCAAAAGGAGTGTGTATTCCTCCGTCTGGGCCAAGTAAAAGAACTTTTGAAAGTCCACCACCCCC
ACCGCATGTCCCATCCTTCGTTTTACACAAGGAATCTGGGATCAACTTCGGAGTATTACCAAAAGGAGTGCGTATTCGTCCGTCTAGGCCGAGTCAAAGATTGTTTTTGA
ATTATTATCTTTCAATAAAATAA
mRNA sequenceShow/hide mRNA sequence
AAGAAGATGGGCAAACACACAGCAAAAATGGCGTCAATTGGTTCTTCTAATGTCTCTTTTGGAGCTTGTGCTCTCGTACTCTTTGGGTTACACATTACAATCTATCATGC
AGATGCCAAAAATGTTTTTGTAGTCGACGAAGGCGACTCTATTGTAGAAAATGAATTGAGTGACCAGAATATAAAGCATCCAAAAGCACACATGCATTTCTCTCTAGGGA
AACCCAACAGACTTGAGAATACTATCGAAGTAAAGGACCTTAAGACAATCCACCTCCTCCACCGCATGTCCCATCCATCGTTTTACACAAGCAATCTGGGATCAACTTCA
GAGTATTACCAAAAGGAATGTGGATTCCTCCGTTTGGGCCGAGTCAAAGAACTTCTAAGAGTCCACCTCTCCCACCGCATGTCTCATCCATCGTTTTACACAAGGAATCT
GGGATCAACTTCGGAGTATTACAAAAAGGAGTGCGTATTCCTCCGTTTGGGCCGAGTTAAAGATTTTCTGAGAGTCCACCTCCCCCACCACATGTCCCATCCGTCGTTTT
ACACAAGGAATCTGGGATCAACTTCGGAGTATTACAAAGGAGTGCGTATTCCTCCGTCTGGGCCGAGTCAAAGAACTTCTAACAGTCCACCTCCCCCACCACATGTCTCA
TCTGTCGTTTTACACAAGGAATCTAGGATCAACTTTGGAGTATTACCAAAAGGAGTGTGTATTCCTCCGTCTGGGCCAAGTAAAAGAACTTTTGAAAGTCCACCACCCCC
ACCGCATGTCCCATCCTTCGTTTTACACAAGGAATCTGGGATCAACTTCGGAGTATTACCAAAAGGAGTGCGTATTCGTCCGTCTAGGCCGAGTCAAAGATTGTTTTTGA
ATTATTATCTTTCAATAAAATAA
Protein sequenceShow/hide protein sequence
KKMGKHTAKMASIGSSNVSFGACALVLFGLHITIYHADAKNVFVVDEGDSIVENELSDQNIKHPKAHMHFSLGKPNRLENTIEVKDLKTIHLLHRMSHPSFYTSNLGSTS
EYYQKECGFLRLGRVKELLRVHLSHRMSHPSFYTRNLGSTSEYYKKECVFLRLGRVKDFLRVHLPHHMSHPSFYTRNLGSTSEYYKGVRIPPSGPSQRTSNSPPPPPHVS
SVVLHKESRINFGVLPKGVCIPPSGPSKRTFESPPPPPHVPSFVLHKESGINFGVLPKGVRIRPSRPSQRLFLNYYLSIK