; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi01G017080 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G017080
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionDnaJ/Hsp40 cysteine-rich domain superfamily protein isoform 2
Genome locationchr01:15771463..15777177
RNA-Seq ExpressionLsi01G017080
SyntenyLsi01G017080
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7027468.1 hypothetical protein SDJN02_11481 [Cucurbita argyrosperma subsp. argyrosperma]1.1e-7567.43Show/hide
Query:  MDSATLTMSSSVILRNSSQKLLAIRKIQDGLCFERNKFSKISAVYPNGSASGGDSSAADVHRRRSSFESLFCYDKAVPEERIETPVGISLAEKMIGDNPR
        MDSATL +SSSVI+R+SS KL + R+IQ  LCFER KFSKI AVYPNGSAS GDSS ADVHRRRS+ E+LFCYDKA+PEERIETPVGISLAEKMIGDNPR
Subjt:  MDSATLTMSSSVILRNSSQKLLAIRKIQDGLCFERNKFSKISAVYPNGSASGGDSSAADVHRRRSSFESLFCYDKAVPEERIETPVGISLAEKMIGDNPR

Query:  CTDCQAKGAVLCSTCSGSGLYVDSILESQGIIVKV------VVDLAIPCVQNVAVEVTWDLNELQRLLSKRFILNCP-QLQTHMLAATPLLFDTA-TTTM
        C++C AKGAVLC+TCSGSGLYVDSILESQGIIVKV      +++LAI      +    W   E          L+ P   Q HML ATP L  TA T  M
Subjt:  CTDCQAKGAVLCSTCSGSGLYVDSILESQGIIVKV------VVDLAIPCVQNVAVEVTWDLNELQRLLSKRFILNCP-QLQTHMLAATPLLFDTA-TTTM

Query:  SIVIQKLN--------SSQIPLIMLQIAPPETPQRTQKDTVRSESITIPKSTLLNASQTYT
        +IVIQKLN        S+QIPLIMLQIAPPE+PQR QKDTVRSE ITI KS LLNASQT T
Subjt:  SIVIQKLN--------SSQIPLIMLQIAPPETPQRTQKDTVRSESITIPKSTLLNASQTYT

KAG7033643.1 hypothetical protein SDJN02_03367, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-8056.59Show/hide
Query:  MDSATLTMSSSVILRNSSQKLLAIRKIQDGLCFERNKFSKISAVYPNGSASG-GDSSAADVHRRRSSFESLFCYDKAVPEERIETPVGISLAEKMIGDNP
        MDS++LT+SSS I RNSSQKLLAIRKIQDGLCF+RNKFSKI AVYPNGSASG  D SAADVHR+RS+FESLFCYDKA+PEE IE PVGISLAEKMIGDNP
Subjt:  MDSATLTMSSSVILRNSSQKLLAIRKIQDGLCFERNKFSKISAVYPNGSASG-GDSSAADVHRRRSSFESLFCYDKAVPEERIETPVGISLAEKMIGDNP

Query:  RCTDCQAKGAVLCSTCSGSGLYVDSILESQGIIVKV--------------------VVDLAIPCVQNVAVEVTWDLNE-----LQRLLSKRFILNCPQLQ
        RCTDC AKGAVLC+TCSGSGLYVDSILESQGIIVKV                    ++ LA       +    W   E     L +L S+         Q
Subjt:  RCTDCQAKGAVLCSTCSGSGLYVDSILESQGIIVKV--------------------VVDLAIPCVQNVAVEVTWDLNE-----LQRLLSKRFILNCPQLQ

Query:  THMLAATPLLFDTA----TTTMSIVIQKLNSSQIPLIMLQIAPPETPQRTQKDTVRSESITIPKSTLLNASQ-TYTDRIKEETMRITPAAKPPRDPTMTK
        THML A P  FDTA    TTTM+IVIQKLNSSQIPLIMLQIAPPETPQRTQ DTVRSESITI KST  NASQ     R   E+      A+   DP   +
Subjt:  THMLAATPLLFDTA----TTTMSIVIQKLNSSQIPLIMLQIAPPETPQRTQKDTVRSESITIPKSTLLNASQ-TYTDRIKEETMRITPAAKPPRDPTMTK

Query:  KMPEASDRTGLNQKAVLKAIEGEQPVKACHKKAM--IPELPIEANNGGYHFSGRKLCVLEADRS
            A+    L    +  A       KA ++  M   P+  I    GGY        ++E+DRS
Subjt:  KMPEASDRTGLNQKAVLKAIEGEQPVKACHKKAM--IPELPIEANNGGYHFSGRKLCVLEADRS

XP_022978300.1 uncharacterized protein LOC111478329 [Cucurbita maxima]3.2e-7086.59Show/hide
Query:  MDSATLTMSSSVILRNSSQKLLAIRKIQDGLCFERNKFSKISAVYPNGSASG-GDSSAADVHRRRSSFESLFCYDKAVPEERIETPVGISLAEKMIGDNP
        MDS++LT+SSS I RNS+QKLLAIRKIQDGLCFERNKFSKI AVYPNGSASG GD SAADVHR+RS+FESLFCYDKA+PEE IE PVGISLAEKMIGDNP
Subjt:  MDSATLTMSSSVILRNSSQKLLAIRKIQDGLCFERNKFSKISAVYPNGSASG-GDSSAADVHRRRSSFESLFCYDKAVPEERIETPVGISLAEKMIGDNP

Query:  RCTDCQAKGAVLCSTCSGSGLYVDSILESQGIIVKVVVDLAIPCVQNVAVEVTWDLNELQRLLS
        RCTDC AKGAVLC+TCSGSGLYVDSILESQGIIVKVVV+L IPCVQN AV VTWDLNE QRL+S
Subjt:  RCTDCQAKGAVLCSTCSGSGLYVDSILESQGIIVKVVVDLAIPCVQNVAVEVTWDLNELQRLLS

XP_023543495.1 uncharacterized protein LOC111803362 [Cucurbita pepo subsp. pepo]2.1e-6986.59Show/hide
Query:  MDSATLTMSSSVILRNSSQKLLAIRKIQDGLCFERNKFSKISAVYPNGSASG-GDSSAADVHRRRSSFESLFCYDKAVPEERIETPVGISLAEKMIGDNP
        MDS +LT+SSS I RNSSQ LLAIRKIQDGLCFERNKFSKI AVYPNGSASG GD SAADVHR+RS+FESLFCYDKA+PEE IE PVGISLAEKMIGDNP
Subjt:  MDSATLTMSSSVILRNSSQKLLAIRKIQDGLCFERNKFSKISAVYPNGSASG-GDSSAADVHRRRSSFESLFCYDKAVPEERIETPVGISLAEKMIGDNP

Query:  RCTDCQAKGAVLCSTCSGSGLYVDSILESQGIIVKVVVDLAIPCVQNVAVEVTWDLNELQRLLS
        RCTDC AKGAVLC+TCSGSGLYVDSILESQGIIVKVVV+L IPCVQN AV VTWDLNE QRL+S
Subjt:  RCTDCQAKGAVLCSTCSGSGLYVDSILESQGIIVKVVVDLAIPCVQNVAVEVTWDLNELQRLLS

XP_038881866.1 uncharacterized protein LOC120073222 isoform X2 [Benincasa hispida]2.1e-6193.33Show/hide
Query:  MDSATLTMSSSVILRNSSQKLLAIRKIQDGLCFERNKFSKISAVYPNGSASGGDSSAADVHRRRSSFESLFCYDKAVPEERIETPVGISLAEKMIGDNPR
        MDSATLTMSSSVILRNSSQKLLA RKIQ GLCF RNKFSKISAVYPNGSASGGDSS ADVHRRRSSFESLFCYDKA+PEERIETPVGISLAE+MIGDNPR
Subjt:  MDSATLTMSSSVILRNSSQKLLAIRKIQDGLCFERNKFSKISAVYPNGSASGGDSSAADVHRRRSSFESLFCYDKAVPEERIETPVGISLAEKMIGDNPR

Query:  CTDCQAKGAVLCSTCSGSGLYVDSILESQGIIVKV
        CTDC AKG VLC+TCSGSGLYVDSILESQGIIVKV
Subjt:  CTDCQAKGAVLCSTCSGSGLYVDSILESQGIIVKV

TrEMBL top hitse value%identityAlignment
A0A0A0L441 Uncharacterized protein1.7e-6192.59Show/hide
Query:  MDSATLTMSSSVILRNSSQKLLAIRKIQDGLCFERNKFSKISAVYPNGSASGGDSSAADVHRRRSSFESLFCYDKAVPEERIETPVGISLAEKMIGDNPR
        MDSATLTMSSSVILRNSS KLL IRKIQ  LCF+RNKFSKISA+YPNGSASGGDSSAADVHRRRSSFESLFCYDKA+PEERIETP+GISLAEKMIG+NPR
Subjt:  MDSATLTMSSSVILRNSSQKLLAIRKIQDGLCFERNKFSKISAVYPNGSASGGDSSAADVHRRRSSFESLFCYDKAVPEERIETPVGISLAEKMIGDNPR

Query:  CTDCQAKGAVLCSTCSGSGLYVDSILESQGIIVKV
        CTDCQAKGAVLC+TCSGSGLYVDSILESQGIIVKV
Subjt:  CTDCQAKGAVLCSTCSGSGLYVDSILESQGIIVKV

A0A1S3B4T2 uncharacterized protein LOC103486023 isoform X13.1e-5888.97Show/hide
Query:  MDSATLTMSSSVILRNSSQKLLAIRKIQDGLCFERNKFSKISAVYPNGSASG-GDSSAADVHRRRSSFESLFCYDKAVPEERIETPVGISLAEKMIGDNP
        MDSATLT+SSSVILRNSS KLL IRKIQ  LCF+RN+FS+ISA+Y NGSASG GDSSAADVHRRRSSFESLFCYDKA+PEERIETP+GISLAEKMIG+NP
Subjt:  MDSATLTMSSSVILRNSSQKLLAIRKIQDGLCFERNKFSKISAVYPNGSASG-GDSSAADVHRRRSSFESLFCYDKAVPEERIETPVGISLAEKMIGDNP

Query:  RCTDCQAKGAVLCSTCSGSGLYVDSILESQGIIVKV
        RCTDCQAKGAVLC+TCSGSGLYVDSILESQGIIVKV
Subjt:  RCTDCQAKGAVLCSTCSGSGLYVDSILESQGIIVKV

A0A1S3B5F7 uncharacterized protein LOC103486023 isoform X21.2e-5989.63Show/hide
Query:  MDSATLTMSSSVILRNSSQKLLAIRKIQDGLCFERNKFSKISAVYPNGSASGGDSSAADVHRRRSSFESLFCYDKAVPEERIETPVGISLAEKMIGDNPR
        MDSATLT+SSSVILRNSS KLL IRKIQ  LCF+RN+FS+ISA+Y NGSASGGDSSAADVHRRRSSFESLFCYDKA+PEERIETP+GISLAEKMIG+NPR
Subjt:  MDSATLTMSSSVILRNSSQKLLAIRKIQDGLCFERNKFSKISAVYPNGSASGGDSSAADVHRRRSSFESLFCYDKAVPEERIETPVGISLAEKMIGDNPR

Query:  CTDCQAKGAVLCSTCSGSGLYVDSILESQGIIVKV
        CTDCQAKGAVLC+TCSGSGLYVDSILESQGIIVKV
Subjt:  CTDCQAKGAVLCSTCSGSGLYVDSILESQGIIVKV

A0A6J1GFH6 uncharacterized protein LOC1114537011.3e-5687.5Show/hide
Query:  MDSATLTMSSSVILRNSSQKLLAIRKIQDGLCFERNKFSKISAVYPNGSASG-GDSSAADVHRRRSSFESLFCYDKAVPEERIETPVGISLAEKMIGDNP
        MDS++LT+SSS I RNSSQKLLAIRKIQDGLCF+RNKFSKI AVYPNGSASG  D SAADVHR+RS+FESLFCYDKA+PEE IE PVGISLAEKMIGDNP
Subjt:  MDSATLTMSSSVILRNSSQKLLAIRKIQDGLCFERNKFSKISAVYPNGSASG-GDSSAADVHRRRSSFESLFCYDKAVPEERIETPVGISLAEKMIGDNP

Query:  RCTDCQAKGAVLCSTCSGSGLYVDSILESQGIIVKV
        RCTDC AKGAVLC+TCSGSGLYVDSILESQGIIVKV
Subjt:  RCTDCQAKGAVLCSTCSGSGLYVDSILESQGIIVKV

A0A6J1IPP7 uncharacterized protein LOC1114783291.6e-7086.59Show/hide
Query:  MDSATLTMSSSVILRNSSQKLLAIRKIQDGLCFERNKFSKISAVYPNGSASG-GDSSAADVHRRRSSFESLFCYDKAVPEERIETPVGISLAEKMIGDNP
        MDS++LT+SSS I RNS+QKLLAIRKIQDGLCFERNKFSKI AVYPNGSASG GD SAADVHR+RS+FESLFCYDKA+PEE IE PVGISLAEKMIGDNP
Subjt:  MDSATLTMSSSVILRNSSQKLLAIRKIQDGLCFERNKFSKISAVYPNGSASG-GDSSAADVHRRRSSFESLFCYDKAVPEERIETPVGISLAEKMIGDNP

Query:  RCTDCQAKGAVLCSTCSGSGLYVDSILESQGIIVKVVVDLAIPCVQNVAVEVTWDLNELQRLLS
        RCTDC AKGAVLC+TCSGSGLYVDSILESQGIIVKVVV+L IPCVQN AV VTWDLNE QRL+S
Subjt:  RCTDCQAKGAVLCSTCSGSGLYVDSILESQGIIVKVVVDLAIPCVQNVAVEVTWDLNELQRLLS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G17840.1 DnaJ/Hsp40 cysteine-rich domain superfamily protein3.5e-3063.54Show/hide
Query:  KISAVYPNGSASGGDSSAADVHRRRSSFESLFCYDKAVPEERIETPVGISLAEKMIGDNPRCTDCQAKGAVLCSTCSGSGLYVDSILESQGIIVKV
        ++ ++ P+ S         DVHR+RSS ES+FCYDK +PEE IE PVG+S++E+ IGDN RCT C+AKGA+LCSTCSG+GLYVDSI+ESQGIIVKV
Subjt:  KISAVYPNGSASGGDSSAADVHRRRSSFESLFCYDKAVPEERIETPVGISLAEKMIGDNPRCTDCQAKGAVLCSTCSGSGLYVDSILESQGIIVKV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTCAGCTACTTTAACCATGTCATCGTCTGTCATTTTGCGTAATTCATCGCAGAAATTACTTGCCATTAGAAAGATTCAAGATGGGTTATGTTTTGAAAGGAACAA
GTTTTCCAAGATCTCCGCGGTCTATCCCAATGGCTCTGCTTCTGGGGGGGATTCTTCAGCTGCAGATGTTCATAGACGACGAAGTTCTTTTGAATCTTTGTTTTGCTACG
ATAAGGCTGTCCCAGAGGAAAGAATTGAGACACCTGTTGGAATATCTCTGGCAGAGAAAATGATTGGGGACAATCCCCGTTGCACTGATTGTCAAGCCAAAGGTGCTGTC
CTTTGCTCAACTTGCTCCGGTTCGGGCTTATATGTTGACTCGATATTGGAGAGCCAGGGAATCATTGTGAAAGTTGTGGTGGATCTGGCAATACCATGTGTCCAGAATGT
GGCGGTCGAGGTCACCTGGGATCTAAATGAGTTGCAAAGACTCCTTTCCAAAAGATTCATCTTGAACTGTCCCCAGCTGCAGACACACATGCTTGCGGCCACGCCATTGC
TATTCGACACTGCAACAACAACCATGAGCATTGTCATCCAGAAGTTAAATTCCTCTCAGATCCCACTTATAATGCTGCAGATTGCACCACCTGAAACCCCGCAGAGAACG
CAGAAGGACACAGTGAGATCAGAGTCTATAACGATTCCCAAATCCACCCTTTTGAATGCCTCCCAGACATATACAGACAGAATCAAGGAAGAAACTATGAGGATTACTCC
TGCTGCTAAACCGCCACGAGATCCAACAATGACAAAGAAAATGCCAGAAGCGAGTGATAGAACAGGGCTAAACCAGAAGGCTGTCTTGAAAGCCATAGAAGGAGAGCAGC
CAGTAAAGGCCTGCCATAAAAAGGCAATGATTCCAGAGCTTCCAATAGAAGCCAACAATGGAGGGTACCACTTTTCCGGGAGAAAATTATGTGTTTTAGAAGCCGACCGA
AGTCCTCGAACAGTCAAAAAAATCACCAACACAGCTACCAGACATAAATGCACATTGAAAACTATGCTAGAAAACCACCTGAAAATTCTCCATCCCACAGCAGGCTCATT
CAGATGGATCGGTTCT
mRNA sequenceShow/hide mRNA sequence
GCTTTTTATGTCAAACAAATGAAAACGTCACCAATGGCCACCAAAATTCATTCATCAATTTGCCATCTGCAATTCGTTAATAACGAGAGAGAAATACCCAATCTTCGAGC
TCACCTGTAGGCTGTAAGCATCGAAGTGAGCTATTGTATTGGCGATTTCCTCGAGAATTTCTTCAATTCGAGCTTTAATTTCCCTTTCCGCGCTTTGGAGGTCAATTTCA
TCGAAGATTTCCTTCTTTCATACGCAAATGGATTCAGCTACTTTAACCATGTCATCGTCTGTCATTTTGCGTAATTCATCGCAGAAATTACTTGCCATTAGAAAGATTCA
AGATGGGTTATGTTTTGAAAGGAACAAGTTTTCCAAGATCTCCGCGGTCTATCCCAATGGCTCTGCTTCTGGGGGGGATTCTTCAGCTGCAGATGTTCATAGACGACGAA
GTTCTTTTGAATCTTTGTTTTGCTACGATAAGGCTGTCCCAGAGGAAAGAATTGAGACACCTGTTGGAATATCTCTGGCAGAGAAAATGATTGGGGACAATCCCCGTTGC
ACTGATTGTCAAGCCAAAGGTGCTGTCCTTTGCTCAACTTGCTCCGGTTCGGGCTTATATGTTGACTCGATATTGGAGAGCCAGGGAATCATTGTGAAAGTTGTGGTGGA
TCTGGCAATACCATGTGTCCAGAATGTGGCGGTCGAGGTCACCTGGGATCTAAATGAGTTGCAAAGACTCCTTTCCAAAAGATTCATCTTGAACTGTCCCCAGCTGCAGA
CACACATGCTTGCGGCCACGCCATTGCTATTCGACACTGCAACAACAACCATGAGCATTGTCATCCAGAAGTTAAATTCCTCTCAGATCCCACTTATAATGCTGCAGATT
GCACCACCTGAAACCCCGCAGAGAACGCAGAAGGACACAGTGAGATCAGAGTCTATAACGATTCCCAAATCCACCCTTTTGAATGCCTCCCAGACATATACAGACAGAAT
CAAGGAAGAAACTATGAGGATTACTCCTGCTGCTAAACCGCCACGAGATCCAACAATGACAAAGAAAATGCCAGAAGCGAGTGATAGAACAGGGCTAAACCAGAAGGCTG
TCTTGAAAGCCATAGAAGGAGAGCAGCCAGTAAAGGCCTGCCATAAAAAGGCAATGATTCCAGAGCTTCCAATAGAAGCCAACAATGGAGGGTACCACTTTTCCGGGAGA
AAATTATGTGTTTTAGAAGCCGACCGAAGTCCTCGAACAGTCAAAAAAATCACCAACACAGCTACCAGACATAAATGCACATTGAAAACTATGCTAGAAAACCACCTGAA
AATTCTCCATCCCACAGCAGGCTCATTCAGATGGATCGGTTCT
Protein sequenceShow/hide protein sequence
MDSATLTMSSSVILRNSSQKLLAIRKIQDGLCFERNKFSKISAVYPNGSASGGDSSAADVHRRRSSFESLFCYDKAVPEERIETPVGISLAEKMIGDNPRCTDCQAKGAV
LCSTCSGSGLYVDSILESQGIIVKVVVDLAIPCVQNVAVEVTWDLNELQRLLSKRFILNCPQLQTHMLAATPLLFDTATTTMSIVIQKLNSSQIPLIMLQIAPPETPQRT
QKDTVRSESITIPKSTLLNASQTYTDRIKEETMRITPAAKPPRDPTMTKKMPEASDRTGLNQKAVLKAIEGEQPVKACHKKAMIPELPIEANNGGYHFSGRKLCVLEADR
SPRTVKKITNTATRHKCTLKTMLENHLKILHPTAGSFRWIGS