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Lsi01G017500 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi01G017500
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionnascent polypeptide-associated complex subunit alpha-like protein 1
Genome locationchr01:16296411..16297642
RNA-Seq ExpressionLsi01G017500
SyntenyLsi01G017500
Gene Ontology termsGO:0005854 - nascent polypeptide-associated complex (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8649660.1 hypothetical protein Csa_012507 [Cucumis sativus]2.1e-0987.5Show/hide
Query:  MTAQTHEELLAAQLEEQKINSDEPIIEDEDDDDDDDEDDDKDDEDAEG
        MTAQT EELLAAQLEEQKIN+DEP+IED+DDDDDDDEDDDKDD+D EG
Subjt:  MTAQTHEELLAAQLEEQKINSDEPIIEDEDDDDDDDEDDDKDDEDAEG
XP_004144316.2 nascent polypeptide-associated complex subunit alpha-like protein 1 isoform X2 [Cucumis sativus]2.1e-0987.5Show/hide
Query:  MTAQTHEELLAAQLEEQKINSDEPIIEDEDDDDDDDEDDDKDDEDAEG
        MTAQT EELLAAQLEEQKIN+DEP+IED+DDDDDDDEDDDKDD+D EG
Subjt:  MTAQTHEELLAAQLEEQKINSDEPIIEDEDDDDDDDEDDDKDDEDAEG
XP_022154479.1 nascent polypeptide-associated complex subunit alpha-like protein 1 [Momordica charantia]9.3e-1089.58Show/hide
Query:  MTAQTHEELLAAQLEEQKINSDEPIIEDEDDDDDDDEDDDKDDEDAEG
        MTAQT EELLAAQLEEQKINSDEP+IEDEDDDDD+DEDDDKDD+D EG
Subjt:  MTAQTHEELLAAQLEEQKINSDEPIIEDEDDDDDDDEDDDKDDEDAEG
XP_022950315.1 nascent polypeptide-associated complex subunit alpha-like protein 1 [Cucurbita moschata]2.7e-0987.5Show/hide
Query:  MTAQTHEELLAAQLEEQKINSDEPIIEDEDDDDDDDEDDDKDDEDAEG
        MTAQT EELLAAQLEEQKINSDEP+IE+EDDDDDD+EDDDKD++DAEG
Subjt:  MTAQTHEELLAAQLEEQKINSDEPIIEDEDDDDDDDEDDDKDDEDAEG
XP_038883549.1 nascent polypeptide-associated complex subunit alpha-like protein 1 [Benincasa hispida]2.7e-0995.83Show/hide
Query:  MTAQTHEELLAAQLEEQKINSDEPIIEDEDDDDDDDEDDDKDDEDAEG
        MTAQT EELLAAQLEEQKINSDEPIIEDEDDDDDDD DDDKDDEDAEG
Subjt:  MTAQTHEELLAAQLEEQKINSDEPIIEDEDDDDDDDEDDDKDDEDAEG
TrEMBL top hitse value%identityAlignment
A0A6J1DLY9 nascent polypeptide-associated complex subunit alpha-like protein 13.8e-0983.33Show/hide
Query:  MTAQTHEELLAAQLEEQKINSDEPIIEDEDDDDDDDEDDDKDDEDAEG
        MTAQT EELLAAQLEEQKINSDEP++ED+DDDDD+DEDDDKD++D EG
Subjt:  MTAQTHEELLAAQLEEQKINSDEPIIEDEDDDDDDDEDDDKDDEDAEG
A0A6J1DM87 nascent polypeptide-associated complex subunit alpha-like protein 14.5e-1089.58Show/hide
Query:  MTAQTHEELLAAQLEEQKINSDEPIIEDEDDDDDDDEDDDKDDEDAEG
        MTAQT EELLAAQLEEQKINSDEP+IEDEDDDDD+DEDDDKDD+D EG
Subjt:  MTAQTHEELLAAQLEEQKINSDEPIIEDEDDDDDDDEDDDKDDEDAEG
A0A6J1EAG7 nascent polypeptide-associated complex subunit alpha-like protein 11.7e-0985.42Show/hide
Query:  MTAQTHEELLAAQLEEQKINSDEPIIEDEDDDDDDDEDDDKDDEDAEG
        MTAQT EELLAAQLEEQKIN DEP++ED+DDDDDD+EDDDKDD+DAEG
Subjt:  MTAQTHEELLAAQLEEQKINSDEPIIEDEDDDDDDDEDDDKDDEDAEG
A0A6J1GFD6 nascent polypeptide-associated complex subunit alpha-like protein 11.3e-0987.5Show/hide
Query:  MTAQTHEELLAAQLEEQKINSDEPIIEDEDDDDDDDEDDDKDDEDAEG
        MTAQT EELLAAQLEEQKINSDEP+IE+EDDDDDD+EDDDKD++DAEG
Subjt:  MTAQTHEELLAAQLEEQKINSDEPIIEDEDDDDDDDEDDDKDDEDAEG
A0A6J1HVQ1 nascent polypeptide-associated complex subunit alpha-like protein 13.8e-0985.42Show/hide
Query:  MTAQTHEELLAAQLEEQKINSDEPIIEDEDDDDDDDEDDDKDDEDAEG
        MTAQT EELLAAQLEEQKINSDEP+IE+EDDDDDD+EDD+KD++DAEG
Subjt:  MTAQTHEELLAAQLEEQKINSDEPIIEDEDDDDDDDEDDDKDDEDAEG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G12390.1 Nascent polypeptide-associated complex (NAC), alpha subunit family protein2.8e-0462.79Show/hide
Query:  EELLAAQLEEQKINSDEPIIEDEDDDDDDD-EDDDKDDEDAEG
        +E+LAA+LEEQKI+ D+P +ED+DD++DDD +DDDKDD++A+G
Subjt:  EELLAAQLEEQKINSDEPIIEDEDDDDDDD-EDDDKDDEDAEG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTGCTCAGACCCATGAAGAGCTTCTCGCCGCTCAGCTTGAGGAGCAAAAGATTAATTCTGATGAGCCTATAATTGAGGATGAAGACGACGATGATGATGATGATGA
GGATGATGACAAGGACGACGAAGATGCCGAAGGTAAGATTGTGCGTTATCGGTTTTTCCAAATCCCGTCGATTAACTTGGTTAATTCTGCTATAATGCAGTGCATATATG
TGTGTGTACGTTTAAAAAGTGATCAGAAATAA
mRNA sequenceShow/hide mRNA sequence
ATAAGCGGAGGCAAATAGATTTTTAGGGTTTCTTCTGTCGTCAGAATCTTTCTGTGAGTTTTGCTCTTCGGCTCGCTGATCTTTCTTCTACTCATCTCTAACGCCATGAC
TGCTCAGACCCATGAAGAGCTTCTCGCCGCTCAGCTTGAGGAGCAAAAGATTAATTCTGATGAGCCTATAATTGAGGATGAAGACGACGATGATGATGATGATGAGGATG
ATGACAAGGACGACGAAGATGCCGAAGGTAAGATTGTGCGTTATCGGTTTTTCCAAATCCCGTCGATTAACTTGGTTAATTCTGCTATAATGCAGTGCATATATGTGTGT
GTACGTTTAAAAAGTGATCAGAAATAA
Protein sequenceShow/hide protein sequence
MTAQTHEELLAAQLEEQKINSDEPIIEDEDDDDDDDEDDDKDDEDAEGKIVRYRFFQIPSINLVNSAIMQCIYVCVRLKSDQK