CuGenDBv2

Gene ID	Lsi01G017550
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	hydroxyproline-rich glycoprotein family protein
Genome location	chr01:16339418..16339678
RNA-Seq Expression	Lsi01G017550
Synteny	Lsi01G017550
Gene Ontology terms	GO:0006508 - proteolysis (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0004175 - endopeptidase activity (molecular function) GO:0008236 - serine-type peptidase activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KGN54878.2 hypothetical protein Csa_012907 [Cucumis sativus]

6.2e-33

91.25

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Query:  MGKNDGEQPLPSAIGYRPSGQAADGRCCCGCVSIPRLIGFRCIFILLLSVALFVSAVFWLPPFLHYADQKDLGLNSSYRG
        MGKNDGEQPLPSAI  RPSG  ADGRCCCGCVSI RLIGFRCIFILLLSVALFVSAVFWLPPFLHYADQKDL LN SYRG
Subjt:  MGKNDGEQPLPSAIGYRPSGQAADGRCCCGCVSIPRLIGFRCIFILLLSVALFVSAVFWLPPFLHYADQKDLGLNSSYRG

TYK09646.1 uncharacterized protein E5676_scaffold447G00450 [Cucumis melo var. makuwa]

1.1e-34

88.37

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Query:  MGKNDGEQPLPSAIGYRPSGQAADGRCCCGCVSIPRLIGFRCIFILLLSVALFVSAVFWLPPFLHYADQKDLGLNSSYRGGTLHRF
        MGKNDGEQPLPSAI  RPSG  ADGRCC GCVSI RLIGFRCIFILLLSVALFVSAV WLPPF+HYADQKDLGLN SYRGG LHRF
Subjt:  MGKNDGEQPLPSAIGYRPSGQAADGRCCCGCVSIPRLIGFRCIFILLLSVALFVSAVFWLPPFLHYADQKDLGLNSSYRGGTLHRF

XP_004144318.1 uncharacterized protein LOC101216010 isoform X1 [Cucumis sativus]

6.2e-33

91.25

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Query:  MGKNDGEQPLPSAIGYRPSGQAADGRCCCGCVSIPRLIGFRCIFILLLSVALFVSAVFWLPPFLHYADQKDLGLNSSYRG
        MGKNDGEQPLPSAI  RPSG  ADGRCCCGCVSI RLIGFRCIFILLLSVALFVSAVFWLPPFLHYADQKDL LN SYRG
Subjt:  MGKNDGEQPLPSAIGYRPSGQAADGRCCCGCVSIPRLIGFRCIFILLLSVALFVSAVFWLPPFLHYADQKDLGLNSSYRG

XP_031740216.1 uncharacterized protein LOC101216010 isoform X2 [Cucumis sativus]

6.2e-33

91.25

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Query:  MGKNDGEQPLPSAIGYRPSGQAADGRCCCGCVSIPRLIGFRCIFILLLSVALFVSAVFWLPPFLHYADQKDLGLNSSYRG
        MGKNDGEQPLPSAI  RPSG  ADGRCCCGCVSI RLIGFRCIFILLLSVALFVSAVFWLPPFLHYADQKDL LN SYRG
Subjt:  MGKNDGEQPLPSAIGYRPSGQAADGRCCCGCVSIPRLIGFRCIFILLLSVALFVSAVFWLPPFLHYADQKDLGLNSSYRG

XP_038882638.1 uncharacterized protein LOC120073837 [Benincasa hispida]

1.5e-34

93.75

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Query:  MGKNDGEQPLPSAIGYRPSGQAADGRCCCGCVSIPRLIGFRCIFILLLSVALFVSAVFWLPPFLHYADQKDLGLNSSYRG
        MGKNDGEQPLPSAI  RPSGQ ADGRCCCGCVSI RLIGFRCIFILLLSVALFVSAVFWLPPFLHYADQKDLGLN SYRG
Subjt:  MGKNDGEQPLPSAIGYRPSGQAADGRCCCGCVSIPRLIGFRCIFILLLSVALFVSAVFWLPPFLHYADQKDLGLNSSYRG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KYS3 Uncharacterized protein

3.0e-33

91.25

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Query:  MGKNDGEQPLPSAIGYRPSGQAADGRCCCGCVSIPRLIGFRCIFILLLSVALFVSAVFWLPPFLHYADQKDLGLNSSYRG
        MGKNDGEQPLPSAI  RPSG  ADGRCCCGCVSI RLIGFRCIFILLLSVALFVSAVFWLPPFLHYADQKDL LN SYRG
Subjt:  MGKNDGEQPLPSAIGYRPSGQAADGRCCCGCVSIPRLIGFRCIFILLLSVALFVSAVFWLPPFLHYADQKDLGLNSSYRG

A0A1S3C173 uncharacterized protein LOC103495852

1.3e-31

88.75

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Query:  MGKNDGEQPLPSAIGYRPSGQAADGRCCCGCVSIPRLIGFRCIFILLLSVALFVSAVFWLPPFLHYADQKDLGLNSSYRG
        MGKNDGEQPLPSAI  RPSG  ADGRCC GCVSI RLIGFRCIFILLLSVALFVSAV WLPPF+HYADQKDLGLN SYRG
Subjt:  MGKNDGEQPLPSAIGYRPSGQAADGRCCCGCVSIPRLIGFRCIFILLLSVALFVSAVFWLPPFLHYADQKDLGLNSSYRG

A0A5D3CGZ9 Uncharacterized protein

5.5e-35

88.37

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Query:  MGKNDGEQPLPSAIGYRPSGQAADGRCCCGCVSIPRLIGFRCIFILLLSVALFVSAVFWLPPFLHYADQKDLGLNSSYRGGTLHRF
        MGKNDGEQPLPSAI  RPSG  ADGRCC GCVSI RLIGFRCIFILLLSVALFVSAV WLPPF+HYADQKDLGLN SYRGG LHRF
Subjt:  MGKNDGEQPLPSAIGYRPSGQAADGRCCCGCVSIPRLIGFRCIFILLLSVALFVSAVFWLPPFLHYADQKDLGLNSSYRGGTLHRF

A0A6J1GGI3 uncharacterized protein LOC111453729

5.8e-29

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Query:  MGKNDGEQPLPSAIGYRPSGQAADGRCCCGCVSIPRLIGFRCIFILLLSVALFVSAVFWLPPFLHYADQKDLGLNSSYRG
        MGKNDGEQP  SA+G RPSGQA+DGR CCGCVSI  LIGFRCIFILLLSVALFVSAVF LPPFLHYADQKDLG  S YRG
Subjt:  MGKNDGEQPLPSAIGYRPSGQAADGRCCCGCVSIPRLIGFRCIFILLLSVALFVSAVFWLPPFLHYADQKDLGLNSSYRG

A0A6J1HW39 uncharacterized protein LOC111467196

9.0e-30

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Query:  MGKNDGEQPLPSAIGYRPSGQAADGRCCCGCVSIPRLIGFRCIFILLLSVALFVSAVFWLPPFLHYADQKDLGLNSSYRG
        MGKNDGEQP  SA+G RPSGQA+DGR CCGCVSI  LIGFRCIFILLLSVALFVSAVFWLPPFLHYADQKD  L S YRG
Subjt:  MGKNDGEQPLPSAIGYRPSGQAADGRCCCGCVSIPRLIGFRCIFILLLSVALFVSAVFWLPPFLHYADQKDLGLNSSYRG

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G10810.1 zinc finger (C3HC4-type RING finger) family protein

1.3e-07

41.98

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Query:  MGKNDGEQPLPSAIGYRPSGQAADGRCCCGCVS-IPRLIGFRCIFILLLSVALFVSAVFWLPPFLHYADQKDLGLNSSYRG
        MGK + +  L  A G   +G +      CGC   I   +GF+C+F+LLLSVALF+SA+F L PF    D++D  L+  +RG
Subjt:  MGKNDGEQPLPSAIGYRPSGQAADGRCCCGCVS-IPRLIGFRCIFILLLSVALFVSAVFWLPPFLHYADQKDLGLNSSYRG

AT3G56590.1 hydroxyproline-rich glycoprotein family protein

4.6e-10

44.58

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Query:  MGKND-GEQPLP---SAIGYRPSGQAADGRCCCGCVSIPRLIGFRCIFILLLSVALFVSAVFWLPPFLHYADQKDLGLNSSYR
        MGKN   EQ LP    A   R +G      CCC C  I      RC+ IL  S A+F+SA+FWLPPFL +AD  DL L+  ++
Subjt:  MGKND-GEQPLP---SAIGYRPSGQAADGRCCCGCVSIPRLIGFRCIFILLLSVALFVSAVFWLPPFLHYADQKDLGLNSSYR

AT3G56590.2 hydroxyproline-rich glycoprotein family protein

4.6e-10

44.58

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Query:  MGKND-GEQPLP---SAIGYRPSGQAADGRCCCGCVSIPRLIGFRCIFILLLSVALFVSAVFWLPPFLHYADQKDLGLNSSYR
        MGKN   EQ LP    A   R +G      CCC C  I      RC+ IL  S A+F+SA+FWLPPFL +AD  DL L+  ++
Subjt:  MGKND-GEQPLP---SAIGYRPSGQAADGRCCCGCVSIPRLIGFRCIFILLLSVALFVSAVFWLPPFLHYADQKDLGLNSSYR

Sequences

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CDS sequence

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ATGGGGAAAAACGACGGAGAACAGCCACTGCCGTCCGCCATCGGCTACAGGCCATCTGGCCAGGCTGCCGATGGCCGATGCTGTTGTGGGTGTGTTTCGATTCCAAGACT
CATTGGCTTCAGATGCATCTTCATTCTGCTATTGTCCGTTGCCTTGTTCGTTTCTGCTGTTTTTTGGTTGCCCCCTTTTCTCCATTATGCAGATCAAAAGGATCTGGGTC
TCAATTCGTCGTATCGAGGTGGGACTCTTCATCGATTCTGA

mRNA sequence

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Protein sequence

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MGKNDGEQPLPSAIGYRPSGQAADGRCCCGCVSIPRLIGFRCIFILLLSVALFVSAVFWLPPFLHYADQKDLGLNSSYRGGTLHRF

Lsi01G017550 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome